Salmo salar (Atlantic salmon): 100502556
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Entry
100502556 CDS
T04363
Symbol
srebf1
Name
(RefSeq) sterol regulatory element binding transcription factor 1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
100502556 (srebf1)
04131 Membrane trafficking [BR:
sasa04131
]
100502556 (srebf1)
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
100502556 (srebf1)
Membrane trafficking [BR:
sasa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
100502556 (srebf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
100502556 (srebf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
ZapB
Motif
Other DBs
NCBI-GeneID:
100502556
NCBI-ProteinID:
NP_001182747
UniProt:
E2IJB1
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All DBs
Position
ssa03:complement(82955243..82969092), ssa06:complement(13986970..14001140)
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AA seq
1172 aa
AA seq
DB search
MNLSFDDQSLDNLDPTISLNDPSDIDTALLNDIDDMLQLINNQDMDMAGLFDPPQFTGVT
PTQDLPALGLPHSIPSPPSTTSSSILSSSPHLDALLGPPIIRSSSPPDKAFHPPTFQQSP
LAQVTTSTPVPLPRPQPQPAPQQGSPSAQAAQGLRQPKVDLPLPVLSPPAPVPVQFPPPA
SSPPYCTRARAPVSSAAPPSPVHLSCPQQPQAHAQQIRINYSTQNGYKAVNHQGGPAQPM
VSLSSSPSGVQPMAIQALTTTAPLLTTSASPPAQTIASHHIQQVLLQPQFIKAESLLLTT
LNRDPCMVTTVASPCITSLATTTPQSTHSLQALMSGGTFLTTVPVMMDSDKLPINRITIS
SKPMGLPPKGEKRTAHNAIEKRYRPSINDKILELKDLVAGTEAKLNKSAILKKAIDYIRY
LQQSNQKLKKENMALKMSAQKNKSLKDLVAMEVDGPQTDVKSELPTPPPSDVGSPTSYSH
CGSDSEPDSPMGEDSKPAVNLMDTSSSTPGSAGMLDRSRMALCTFTFLFLSLNPLAAMLC
GGMGSSTTANNHAVHPGTGRNMLGLDNAADSWGWMDWVLPTLLVWLLNGVLVAGVLVRVL
VYGEPVTRPHSGSSVLFWRHRKQADLDLARGDFAQASQNLWTCLKALGRPLPTSQLDLAC
AALWALLRLCLQRLGVGRWLAARAGGLRARGLREDACKSSRDAALVYHRLHQLHMTGKLG
GSHLSAVHMALSAVNLAECSGSCLPVATLGEVYVSAALRVKASLPRLLHFSSRLFLSSAR
QACLSSSGSVPPAMQWLCHPLGHRFFVDGDWAVRSTPKDSIYSQAGNTVDPLAQVTQAFR
EHLLEKALYCVAQPRGEKSPSDGEGEYADALEYLQLLTSASDAAGANTQSFAIGSNMATV
TGCDLHSKWWSSVAVVIINWLQGDDAAAERLYPAAEHLPRSLQTAESPLPRASLNTFRAV
RAMLTKPENCQLSLSHSEKASGLLRDSLNLGPHCHSSSLDKVVQLLLCDLLLVMRTNVWR
LQQSSSPGGLSLQASPAELHGFQQDLSSLRKLAQSFRPAMRRLFLHEATARLMAGASPTR
THQLLDRSLRRRATPGAKTEECEMRPGQREQAEAVMLACRYLPPSFLSAPGQRVGMLADA
ARTLEKLGDKRTLHDCQQMIIKLGSGTTVTSA
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgaacttgtcttttgacgatcagtcactggataatctggatccaaccatatccctaaat
gaccccagcgatattgacacagcgctgctcaatgacattgatgacatgctgcagctcatc
aacaaccaggacatggacatggcgggtctctttgacccccctcagttcacaggggtcacc
cctacccaggacctccctgccctcggcctgccccactccatcccctcccctccatccacc
acatcctcctccatcctgagcagcagcccccaccttgatgctctcctggggccccccatc
atccgcagttcctcccccccagacaaggccttccacccccccaccttccagcagtcgccc
ctggcccaggtcaccacctccacccctgtaccactacccaggccgcagccgcagccagct
ccccagcagggctctccatcagcccaggctgctcagggtctcaggcagcccaaggtggac
ctgcccctgccggtcctctcccctccagcccctgttccagtccagtttcctcccccagcc
tcctcccccccatactgtacccgggccagagcccctgtgtccagcgctgcccccccaagc
cctgttcacctctcctgcccccagcagccccaggcccacgcccagcagatccggattaac
tacagcacccaaaatggctacaaagctgtcaatcatcaaggaggccccgcccagcccatg
gtcagcctgtcgtcgtccccttccggtgttcagccaatggccatccaggctctgaccacc
acggcccccctcctgaccacctcagcaagccccccagctcagaccatcgcatcacaccac
attcaacaagtgttgctccagccccagtttatcaaggctgagtctctgctgctgaccacc
ttgaaccgtgacccctgtatggtcactactgtggcctctccatgcatcacctccctggcc
accaccacaccccagagcacccactcactgcaggctctgatgagtggtggtaccttcctg
accacagtgccagtgatgatggactctgacaagctgcccatcaaccgtatcacaatcagc
agtaaacctatgggcctgccccccaagggcgagaagcgcaccgcccacaacgccatcgag
aagcgctaccgcccgtccatcaacgacaagatccttgagcttaaagacctggtggccggg
actgaggccaaactcaacaagtcggcaattctgaagaaggcgatagactacatccgctac
ctgcagcagtccaaccagaaactgaaaaaagagaacatggccctgaagatgtctgcccag
aagaacaagtctctgaaggacctggtagccatggaagtggacggcccacagacagacgta
aagagcgagctacccacccctccgccatccgacgtgggctctcccacctcctactcccac
tgtggcagcgactcagaacccgacagccccatgggggaggacagcaagccggcggtcaat
ctgatggacacgtcctcgtccaccccgggcagtgctggcatgctggaccgctcccgcatg
gcgctgtgcacattcaccttcctcttcctctccctcaatcccctggctgccatgctgtgt
ggagggatgggctccagcaccaccgctaacaaccacgcagtgcatcctgggacaggcagg
aacatgctgggcctagacaacgcagctgactcgtggggctggatggactgggtgctaccc
actctgttggtgtggctgctgaatggtgtgctggtggctggggttctggtcagagtgttg
gtctatggagagccagtcaccaggccccactctggatcctccgtgctgttctggaggcac
cgcaagcaggcagacctcgacctggcacggggagactttgcccaggccagtcagaacctg
tggacctgcctcaaggccctgggtcgccccttacccacctctcagttggacctggcctgt
gctgccctgtgggccctgctccgcctctgcctccagcggctaggggtgggtcgctggttg
gctgccagggccggggggctccgcgccagggggctccgggaggatgcgtgcaagagcagc
cgcgacgctgccctggtctaccaccgcctgcaccagctgcacatgaccggtaaactgggc
ggtagccacctgtctgcggttcacatggctctgagtgctgtaaacctggcagagtgttca
ggctcctgcctccccgtggccacgctaggagaggtctacgtctccgcagccctacgagtc
aaagccagcctacccagactccttcacttctcctcccgtctgttcctgagcagtgcccgc
caggcgtgtctctcctccagtggcagtgtccccccggccatgcagtggctctgtcaccct
ctgggccaccgcttctttgtggacggggactgggccgtccgcagcacccccaaagatagc
atctacagccaggcagggaacacagtggaccctctggcccaggtgacacaggccttcaga
gaacacctgttggagaaggctctgtactgtgtggcccagccccggggggagaagagcccc
agtgatggagagggggagtatgcagatgctctggagtaccttcagctgttgactagtgca
tcagacgccgccggagccaacacccagtccttcgccatcggatccaacatggctaccgtc
actggctgtgaccttcattccaaatggtggtcgtcggttgccgtggtgatcattaactgg
ctccaaggagacgacgcagcggccgagagactgtaccccgccgccgagcacctgccccgt
agtctacagactgcagagagtccattgcccagggcgtctttgaacactttccgagcggtg
cgagccatgctgaccaaaccagagaactgtcagctgagtctgagccacagtgagaaggcc
agcggcctgctgagagacagcctcaacctgggaccacactgtcacagcagcagcctagac
aaggtggtccagttgctgctgtgtgacctgctgctggtgatgcggaccaacgtgtggcgt
ctgcagcagagctccagtcccgggggcctctccttgcaggcctccccggccgagctgcac
ggcttccagcaggacctctcctccctcaggaagctggcccagagcttcaggcccgccatg
cgcaggttgtttcttcatgaggcaaccgccaggctgatggctggggccagtcccacgcga
acacatcagctcctggaccgttcgctcagacgcagagccacccccggagccaagacggag
gagtgtgagatgcgtcctggccagagggagcaggctgaggcggtgatgttggcgtgtcgc
tacctgcccccctccttcctgtcggcaccgggccagcgggtgggcatgctggcggatgca
gcccggacactggagaagctgggggacaagcgcaccctccacgactgccagcagatgatc
attaagctgggcagcggcaccactgtcacctctgcctag
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