KEGG   Salmo salar (Atlantic salmon): 100846966
Entry
100846966         CDS       T04363                                 
Symbol
irf1
Name
(RefSeq) interferon regulatory factor 1
  KO
K09444  interferon regulatory factor 1
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa04625  C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    100846966 (irf1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sasa03000]
    100846966 (irf1)
Transcription factors [BR:sasa03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    100846966 (irf1)
SSDB
Motif
Pfam: IRF
Other DBs
NCBI-GeneID: 100846966
NCBI-ProteinID: NP_001239290
UniProt: B5XBW9
LinkDB
AA seq 312 aa
MPVSRMRMRPWLEEKIESNSISGLVWVDKDNKIFSVPWKHAARHGWDLNKDACLFKQWAM
HTGKFIQGETKTDPKTWKANFRCAMNSLPDIEEVKDKSINRGSGAVRVYKMKNIYSKPNN
KRSKANNVKKNKKGSQIKTGGMAYSETNCPENLNTNTHLQEDSMTQESIVDSTGNLGDFT
FAPECSTNVEIGPDSTNNFYASFQVSPDHSTDYEDGHQETLIGMTHHWEQGSVNDKGFQS
NEVGTAESFDTAESYHSQESQWSDNSETEIELRLYTELSSGLPIIDDILSCTDYWTLNNN
TSSYPQQITCPL
NT seq 939 nt   +upstreamnt  +downstreamnt
atgcctgtgtctaggatgagaatgaggccttggttggaggaaaagattgagtccaactcc
atcagtggattggtgtgggtggacaaggacaataagattttctccgtcccttggaagcat
gctgcacgtcatggatgggacttgaacaaggacgcatgtctgttcaagcaatgggccatg
cacacagggaaattcatacaaggcgagactaaaacagaccctaagacatggaaggctaat
ttccgctgtgcaatgaactcccttcctgacatagaggaagtgaaagacaaaagcatcaac
agagggagtggagcagtgcgcgtctacaaaatgaagaacatctactctaaaccaaataac
aagaggtcaaaagcaaacaatgtaaagaaaaataagaaggggtcacagatcaagacaggg
ggaatggcgtacagcgaaaccaattgccccgagaacctcaataccaacacacacctgcag
gaggacagtatgacacaggaaagcatagtagacagcacaggcaacctaggtgattttaca
tttgctccagagtgttccaccaatgtggaaataggcccagacagcaccaacaacttctac
gcatctttccaagtgtcaccagaccactccacagactatgaagacggtcaccaagaaacc
cttattgggatgacacatcattgggagcaaggcagtgtaaacgacaaggggttccagagc
aatgaagtaggcacagcagagtccttcgacactgcagagtcttaccacagtcaagagagc
caatggagtgataactcagaaacggaaatagagctgcggctgtacacagaactcagctca
ggactaccgatcattgacgacatcctctcttgcaccgactactggacactgaacaacaac
acatccagttatccccaacagatcacatgcccactctga

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