Salmo salar (Atlantic salmon): 101448006
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Entry
101448006 CDS
T04363
Symbol
thex1
Name
(RefSeq) Histone mRNA 3-exonuclease 1
KO
K18416
3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
101448006 (thex1)
03036 Chromosome and associated proteins [BR:
sasa03036
]
101448006 (thex1)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
101448006 (thex1)
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
101448006 (thex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
SAP
Motif
Other DBs
NCBI-GeneID:
101448006
NCBI-ProteinID:
NP_001265937
UniProt:
B5X2C3
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All DBs
Position
ssa13:89091829..89095202
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AA seq
346 aa
AA seq
DB search
MSKMEECKENIQDRDGNVKLSSKPEEDDKSCSRVRVCSNIGEPVRQASPTHGDFSDPVYK
EIALANGHINRMNKDELRAKLAELKLDTRGVKEVMKKRLKNYYKKHKLLMTQSVTAGEAT
DTYYDYICVVDFEATCEQDNPADFTHEIIEFPMVLLNTHTLEIEDTFQEYVRPEVNTQLS
EFCVKLTGITQKMVDDADTFPDVLEQVVLWLQEKELGTKYKYTLLTDGSWDMSKFMNTQC
RLNSLRYPQFAKKWINIKKLYGNFYKVPRTQTKLSSMLEKLGLKYEGRPHSGLDDSRNIA
HIAMRMLQDGCQLRINERMHEGQLRTVPSSAPVEGAPPPHTPRSRD
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaatggaggaatgcaaggagaatattcaagacagggatggcaatgtgaaattg
tcctctaaaccggaggaagatgacaagtcttgcagcagagtcagagtttgtagtaacatc
ggtgaacccgtccgtcaagcatctcctactcacggcgacttcagtgatccagtttacaaa
gagattgctcttgcaaatggacatatcaaccgcatgaacaaggatgagcttcgggccaaa
ctggcagaattgaagcttgacacaaggggtgtgaaggaagtgatgaagaagcggttgaag
aactactacaagaaacataagctgttgatgacgcagtctgtgacagcaggtgaagccacg
gatacctactacgactacatctgcgtggtggactttgaagcaacgtgtgaacaggacaac
cctgctgacttcactcatgaaatcattgagttcccaatggtcctgctcaacacgcacact
ttagagattgaagacacctttcaggaatatgtcagaccagaagtcaacacacagctgtca
gagttctgtgtaaagttgacaggaataacacagaaaatggtggatgacgcagacacgttt
cctgatgtccttgagcaggttgtgctttggcttcaggagaaagagcttggcacaaaatac
aaatacactcttcttacagacggatcttgggacatgagcaagttcatgaacacccagtgc
cgtttaaatagtctcagatatccacagtttgcaaagaagtggatcaacatcaaaaaatta
tacgggaacttctataaggtccctcgcacccagaccaagctgagtagcatgcttgagaag
ctgggacttaaatacgagggccgccctcactctggcctggatgactcgcgcaatatcgcc
cacattgcgatgcgaatgctgcaagacggctgccaactgcgcatcaacgagcgcatgcac
gaaggacagctgcggactgtgcccagctctgcccctgtggaaggagctccacccccacat
accccccgcagcagagactag
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