Salmo salar (Atlantic salmon): 101448008
Help
Entry
101448008 CDS
T04363
Symbol
hdac2
Name
(RefSeq) Histone deacetylase 2
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03082
ATP-dependent chromatin remodeling
sasa03083
Polycomb repressive complex
sasa04110
Cell cycle
sasa04330
Notch signaling pathway
sasa04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101448008 (hdac2)
03083 Polycomb repressive complex
101448008 (hdac2)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
101448008 (hdac2)
04350 TGF-beta signaling pathway
101448008 (hdac2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
101448008 (hdac2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
101448008 (hdac2)
Enzymes [BR:
sasa01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
101448008 (hdac2)
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
101448008 (hdac2)
HDAC complexes
Sin3A-HDAC complex
101448008 (hdac2)
BRAF-HDAC complex
101448008 (hdac2)
REST complex
101448008 (hdac2)
SHIP complex
101448008 (hdac2)
MiDAC complex
101448008 (hdac2)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
101448008 (hdac2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
101448008 (hdac2)
Chromatin remodeling factors
NuRD complex
101448008 (hdac2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
101448008
NCBI-ProteinID:
NP_001265942
UniProt:
B5X2P6
LinkDB
All DBs
Position
ssa06:54462114..54470422
Genome browser
AA seq
468 aa
AA seq
DB search
MAYTVAGGTKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHK
ATAEEITKYHSDDYIQFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSA
AGSVKLNRQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIH
HGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGVDDESYE
LIFKPVMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIRGHAKCVEYIKSFNLPLLML
GGGGYTIRNVARCWTYETAVALDTEIPDELPYNDYFEYFGPDFKLHISPSNMTNQNTLEY
MDKIKQRLFENLRMLPHAPGVQMQTVPEDAITDDTVDEDAEDPDKRMSIRASDKRIACDE
EFSDSEDEGEGGRRNEANHKKGTKRTRVEEGDKEKVEVEKSKETSTEN
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcttacaccgttgcaggtggaaccaagaagaaagtctgctactactatgacggtgac
attggcaattactattatggacaagggcatcccatgaaaccacaccgaattcgaatgacc
cacaacctactgttgaactatggactatacagaaaaatggaaatatatagaccacacaaa
gccactgcagaggaaattaccaaataccacagtgacgattacatccagtttctcagatcc
atacgaccagacaacatgtcggagtacagcaagcaaatgcagcggtttaatgttggtgag
gattgtcctgtatttgatgggttgtttgagttctgccagttatctactggtggctctgct
gcgggatcggtgaaactcaacaggcagcagacggacattgcggtgaactgggccggtgga
ctccaccacgctaagaagtctgaggcctctggcttctgttacgtcaatgacattgtgttg
gccattctggagctcctcaagtaccatcagagggtactgtacatagatattgacatccac
catggggatggagtagaggaagccttctacaccacagaccgggtcatgactgtgtccttc
cacaaatacggagagtacttccccgggactggagacctcagggatattggtgctggaaaa
ggtaaatactacgctgtcaacttccccctgagggacggcgttgacgatgagtcgtatgag
cttatcttcaagcctgtgatggccaaggtgatggagatgtaccagcccagtgcagtggtg
ctgcagtgtggagcagactccctctcaggagaccgactgggctgcttcaacctaaccatc
cgcggccatgctaagtgtgttgagtacattaagtcgttcaaccttcccctgctaatgctg
ggtggaggaggctacaccatccgcaacgtggcccgctgctggacctacgagacggccgtg
gctctggatactgagatccctgacgaactgccatacaacgattactttgagtactttggg
cctgacttcaagttgcacatcagcccatccaacatgaccaaccagaacacattggagtac
atggataagatcaagcagcgtctgtttgagaacttgcggatgctacctcacgccccggga
gtgcagatgcagacggtccctgaggacgccatcactgacgatacggtggatgaggatgca
gaggaccccgacaaacgcatgtccatccgtgcttcagacaagaggatagcctgcgacgag
gagttctccgactctgaggacgagggagagggaggaaggcggaacgaagccaatcacaag
aaaggaacaaaacggactcgagttgaggagggggataaagagaaagttgaggtggagaaa
tcgaaggaaacaagcactgagaactga
DBGET
integrated database retrieval system
