Salmo salar (Atlantic salmon): 106560219
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Entry
106560219 CDS
T04363
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106560219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106560219
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
106560219
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
106560219
NCBI-ProteinID:
XP_013978329
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Position
ssa10:30881613..30902785
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AA seq
180 aa
AA seq
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MLCPKAKGVDVDAQGSVNGIPVLEVDVESFKEKPWRKHGSHLSDYFNYGFNEDSWKAYCE
NQRRLRMGYVSRNGGLPCFRSDYSSPSNHYKSALSRKTSSTINVIGGQTGTISRVEERRR
HNIEGNNIQVLSEPSDAEHSATKMPSFFPPHLFSRLHPTMLTTPLPFLHHATLLEHPLPL
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgctttgccccaaagccaaaggagtggacgtggatgcacagggcagtgttaatggaatc
cctgtgttggaggtcgacgtggagtcttttaaagaaaagccatggagaaagcatggctcg
cacctctctgactactttaactatggctttaacgaggactcctggaaagcctactgtgag
aaccagaggagactacgcatgggttatgtgtccaggaatgggggccttccctgctttaga
tctgactactcctcccccagcaaccattacaaatcagccttgtccagaaagacaagcagc
accatcaatgttattggaggacaaactggtaccatcagccgggtagaggaacggagacgt
cacaatatagaaggaaataacatccaggtgctttccgagccgtctgatgctgagcattct
gccactaagatgccctccttcttccccccccacctcttttcccgcctccaccctacaatg
ttaactacgcccctcccattcctccaccatgctaccctcctggagcaccctctccctctc
tga
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