Salmo salar (Atlantic salmon): 106560248
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Entry
106560248 CDS
T04363
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 2-like
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04114
Oocyte meiosis
sasa04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
106560248
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
106560248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106560248
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106560248
Factors involved in mRNA localization
Trans-acting binding proteins
106560248
mRNA cycle factors
P-body specific factors
106560248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_7
CEBP_ZZ
RRM_1
zf-U1
Motif
Other DBs
NCBI-GeneID:
106560248
NCBI-ProteinID:
XP_013978384
UniProt:
A0A1S3KJ88
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Position
ssa10:30059687..30084470
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AA seq
620 aa
AA seq
DB search
MDSPITHHINNGNGSSTGNMLSAGLGGGFPNLQNQEMQNPSGASASPPLPGFGTPWSVQT
SSPPPVSNSANPIHHSNAINQMPHTDPDNSFYPGIPSSINPAFFQSFSPVSTNPCPGINV
QGFSSQFSPQINAHQQPQQQSRRSPVSPQMHPQHHQHQQGAFLQQRNNYNHHHQSMVKQS
PWAGSHQGSGWGSGGMSWGRDHRRGGGMGIPGSVSQVSPMKKPFSSNVIAPPKFPRSAGS
MGPKSWMEENMFRTDSNSNTLMPLQERSRMYDSLNMHSLESSLIDIMRAEQDPMKGRVGC
PHPGADGLLMLNARSYGRRRGRSSLFPIEDSLLDDGHGNQGIPGLSPNCYPHQNGERIER
FSRKVFVGGLPPDIDEDEITNSFRRFGHLVVDWPHKAESKSYFPPKGYAFLLFQEESSVQ
ALIEACMEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPR
PLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHG
DIDKRVEVKPYVLDDQLCDECQGARCGGKFAPFFCANVTCLQYYCEFCWANIHSRAGREF
HKPLVKEGADRPRQINFRWN
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggactcccccatcacccaccatataaataacggcaatggcagtagcaccggcaatatg
ttgtccgcaggactcgggggcggttttccgaacctccagaaccaagagatgcagaacccg
agtggcgcctcagcttcacctcccctccctggatttggaaccccgtggtccgttcagacc
agctctccaccacccgtttccaactcggccaaccctatccaccactcaaacgcgattaat
cagatgcctcataccgacccagacaacagcttctatcccggtatcccctcctctatcaac
ccggccttcttccagagtttttctccggtgtcgactaatccatgcccagggattaacgtg
cagggcttcagcagccagttctcaccccagatcaacgcccaccagcagccgcagcagcag
agccgcaggtcccccgtaagcccccagatgcacccccagcaccatcagcaccagcagggc
gccttcctgcagcagaggaacaactacaaccaccaccaccagtccatggtgaagcagtct
ccctgggctggcagtcaccaggggagtggctggggctctgggggtatgtcctggggtcgg
gaccaccgtcgtggtggaggcatgggcatcccgggctctgtcagccaggtttctcccatg
aagaagcccttctccagtaacgtcattgcacctcccaagttcccccgctccgccggctcc
atgggccccaagtcctggatggaggagaacatgttccgaacagacagtaacagtaacacg
cttatgcctctccaggaacgctctagaatgtacgacagcctgaacatgcactccctggaa
agctctctgattgacatcatgcgggcggagcaagatccaatgaagggtcgtgtgggatgc
cctcatcccggggccgacggcctgctcatgctcaatgcaaggagctatgggagacgtcga
ggccgctcctccctgttccccattgaagacagcctccttgatgatgggcacggtaaccag
ggcatcccagggcttagccctaactgttacccccaccagaacggggagcgcatcgagcgt
ttctcccgcaaagtgtttgtgggcggcctgccccctgacatagatgaagatgagatcacc
aacagtttccgtcgctttggccacctggtggtggactggccacacaaggctgagagcaaa
tcctacttcccccccaaaggttacgccttcctgctattccaggaggagagctcagtgcag
gctctgatcgaggcctgcatggaggaggatggcaagctctacctgtgtgtctccagcccc
accatcaaagacaagcctgtccagattcgtccgtggaacctgagtgacagtgactttgtg
atggacggctctcagcccctggatcctcgcaagaccatctttgtaggaggggtgccccgc
cctctcagagcagtggagttggccatgattatggaccgtctctatgggggggtctgctac
gctggcatcgacaccgatccagagctcaagtaccccaaaggtgcggggcgcgtcgcattc
tccaatcagcagagttacatcgctgccatcagcgccagatttgtccagctgcaacatgga
gacattgacaagcgggtggaggtaaagccctatgttctggacgaccagctgtgtgatgag
tgccagggtgcgcgttgcggagggaaatttgcccctttcttctgcgccaacgtgacctgc
ctgcagtactactgtgagttctgctgggctaacatccactcccgcgccggccgagaattc
cacaagccgctggtcaaagagggggctgaccgcccacgccagatcaacttccgctggaac
tga
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