Salmo salar (Atlantic salmon): 106560284
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Entry
106560284 CDS
T04363
Name
(RefSeq) leucine-rich repeat-containing protein 16B-like
KO
K20493
leucine-rich repeat-containing protein 16
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106560284
Membrane trafficking [BR:
sasa04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
106560284
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Myosin_TH1
Microvir_H
Motif
Other DBs
NCBI-GeneID:
106560284
NCBI-ProteinID:
XP_013978498
UniProt:
A0A1S3KIE0
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All DBs
Position
ssa10:complement(31623601..31663386)
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AA seq
1538 aa
AA seq
DB search
MASKEITAPCFVSVSRDITESIRKIIDKSPTKFIRGIKLDTKNGKSEDRILVLTTWRLYL
LVAKVPTKIEVTFNFLEIRAMNSHPEHQVVIDTDKSTYSLWLQSSDHLSHVVSHVNFALS
RMFNNSVFAPSICQSDSELSEGSRKYSPSSETSMETQRACGGFSETYAALCDYNGISCKE
EVQWDVDTIYHSQDNREFNLVDFSHLESRDLAVILASMAYNTWFTKLYCKDIRIGSEVTE
QVLHTLSKSSSLEEITLENAGLKSDFPQKLSVALSENPASVIHSLNLAHNTLDNQGVANL
IQQVCRLSKGLRLLNLSSTSLNSKGVVSLSQALCSSDEYSNSLLHLDLSKNPGFLSGEDA
SNLCLFLSQPNCLVHLDLSGTDCSVDSLFGALLRGCCADLSYLNLSKNTFSHRKVKETLP
LFCQFFSSAFSLTHVSLASMKLPPEALRSLFIGLTTNPHVNDLHLDISGCELKSAGASVI
QELFPRLSSIATLDISDNGLDAHLLSVLPALSRHTSLKHLYLGKNFNIKGRVLEEILHKL
VQLIQEEECALQSLSLADSRLRSRGTVLVNALGSNTCLRKVDLSGNSLEDIGAKMLSKAL
QINTTLRSVTWDRNNTSATGFLDVARALEHNFTLQYMPLPLSDISQAYRSTSERTEQALT
KIQRALLRNNQTQCFSQRQALRLHQGLVTSTAEQVMERLSVCVQQQVCVLRGVGEMEEIQ
AAKQVLKEARNSRALYPSLCELAHVLSVDGPVRQRLDQLAGELTKAADKELQVIVDSMVS
LCRELCPLSSSAAERLSPRLSSVSERISIPRSAIRTALMERAAQDIHRALEEVKLSVVSY
LTNTIVDQILQELYATHKTLTCQVSQVKRWEVTCDGGTGLRSHRHRDSLDLTDDEMGTSI
VSIDTIAIKKHSSRTRRIRPVSTRLSQCDDSSSSPPPSASSFFSSFSALSRSTSWEGLSA
LPTQGAPLHHVTRVRPRPPQRHRAGHAPSDTHCTENGAVTPIDHGLPDLYTKKVLPDSQL
SSLHKAHSLRRKKRRNMLAIFGFRRNRNSTLSNQGPDSGGDGCGEECRTVAMAPTGTATE
NVYTLLQPPLSAARTGSPGEGGDVEDQRLEEPVGLSLQPVQSIPPQPGMPGSRHPFYSPS
QQSELETEHEQPADTDRQVDRQWTEDRWVDRQWTEGNHTDRERTLIRPADRQAERHWPED
RLSDKTWTEGRTAERQMDRYWTERRHADRHMERQWTVDRHTPRQMDRQFDRHRQWTVSRQ
QTDRTWAEGRPKDIQIDRQWIDSRQSGRQTDRQAQRQHLAQSPLPPYPSDRTPSPKSETD
SQKNMDRQKYSDTQMDRHLRSDTAVGQVEGWRDGGGVPPGRVSTSASKPDPPPQSSKPNL
SKLRQRHLQESSEEEAGGERDGGRMERKERDRDAEGQPPPIPEKPKTSSYVSSLNEYANE
RPIRPPASSAFRKPLLGLAYRAVSQGEEAVRPQAHVKPQRNRKAMSCDTGTDRDSPNNLE
KPPNRKPPVKKPRLPQNRNKSLDYPDSVNLASGNSELL
NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atggcttctaaagagataactgccccttgttttgtcagtgtgagcagggatattacagag
agtatcaggaagattattgacaagtccccaaccaagtttatacgtggcattaagcttgac
accaaaaatggcaaatcagaggataggatactggttctcacaacatggagactctatctc
ctggttgccaaggttccaacaaagatagaggtgacatttaacttcttggagatccgagcc
atgaacagtcacccagagcatcaggtcgtcatagacacggacaagtccacttattccttg
tggctacagtcaagtgaccacctcagtcatgtggtcagccatgttaactttgccctgtcc
agaatgtttaacaactctgtgtttgctccttccatctgtcagtcagacagtgaactttct
gagggaagcaggaagtactcccccagctcagagacgtctatggaaactcagagggcctgt
ggagggttttcggagacctacgctgccctgtgtgactataatggaatcagctgcaaggag
gaagtgcagtgggatgtggacactatctatcactcccaagacaacagggagtttaatcta
gtggacttcagccacctggaaagcagggacttggcagttattttggcctcaatggcgtac
aatacatggttcaccaaactatactgtaaggacatacgcatagggtcagaggtcactgag
caggttctgcacaccctcagtaagtcctccagtctggaagagatcactctggagaatgct
ggtctcaaatcggactttcctcagaaactgtcagttgcgctctcagagaatcctgcttct
gtcatccactctctgaatctggcccacaacacactggacaaccaaggtgtggctaacctc
atccagcaagtgtgtcgcctcagcaaaggactgcgtctcctcaacctctcctcaacctcc
ctcaactccaaaggtgtggtgtctctgtctcaggctctgtgctccagtgatgagtattct
aactctttgctgcacctggacctgagcaagaaccctgggttcctgtctggggaggatgcc
tcgaatctgtgcctgttcctgtcccagcctaattgtctggtgcatttggacctgtctggc
actgactgttctgttgactcgctatttggggctctgctgaggggttgttgtgccgatctc
tcctacttgaatctctccaaaaataccttctcccacaggaaagtgaaggagaccctgccg
ttgttctgtcagtttttcagctcggccttcagtctcacccatgtcagcctggcctctatg
aagctgccccctgaggccctgaggtctctcttcattggcctgaccacaaaccctcacgtg
aatgacctacacctggacattagtggctgtgagctgaaatctgcaggagcttctgtgatc
caggagctgttccctaggctctcctccatcgccactctggacatctcagacaacgggctg
gatgcacaccttctctcagttctaccagctctctccagacacacctccctaaagcacctg
tatctgggcaagaacttcaacatcaagggcagggtgttggaggaaatcctacacaagctg
gtccaactcatacaggaagaggagtgtgccctccagtccctctcactggctgactcgcga
ctgcgttctcggggcacagtgctggtaaacgctctgggcagcaacacctgtctgcgaaag
gtggacctgagtgggaacagcctggaggacattggagccaagatgctgagcaaagcccta
cagatcaacaccacactcaggagtgtgacgtgggatcgtaacaacacctcagctacagga
ttcctggatgtggctcgagcccttgaacataacttcaccttgcagtacatgcccctcccc
ctcagtgacatcagccaggcgtaccgtagtacctccgagaggacagagcaggcactgacc
aagatccagcgtgctctgctgcggaacaaccagactcagtgcttctctcagagacaggct
ctacggctgcaccagggcctggtcaccagcactgctgaacaggtgatggagcgtctgagt
gtgtgtgtgcagcagcaggtgtgtgtgctgcgtggagtaggggagatggaggagattcaa
gctgctaaacaggtgctgaaggaggccagaaactcccgtgcgctgtacccctctctctgt
gagctagctcatgtgctgtcagtagacgggccagtcagacagagactggaccaactggca
ggggaactgaccaaagcagctgacaaggaactacaggtgattgttgattccatggtgtct
ctctgtcgtgagttgtgcccgctgtcctcctctgcagcagagagattaagtcctcggctc
tcgtctgtctcggagcgcatctccatccctcgctccgccatccgcacagccttgatggag
agagcagcacaggacattcacagagcgctggaggaggtgaagctctcagtggtctcctat
ctcaccaacaccatcgtggatcagatcttgcaagagctctacgccactcacaagactctg
acgtgtcaggtgtcccaggtgaagcgctgggaggtgacatgtgacggaggaacaggtctg
aggtcacacagacacagagactctctggacctcacagatgatgagatgggcaccagtata
gtgagcattgacacaattgccattaagaagcatagctctagaactagacgtattcgacct
gtctctaccaggctgagccagtgtgatgactccagctcctccccacccccctctgcgtcc
tcttttttctcttctttctcggccctctctcgctctacatcctgggaggggctgtctgcg
ctccctacccaaggtgcacctctccatcatgtgacgcgggttaggccaaggcccccacag
aggcaccgagcaggacatgccccctctgacacacattgcactgaaaatggagctgtcacc
cctattgatcatggactcccagatttatacaccaagaaagtgctccctgatagtcagtta
tcctctctccataaagcccactctctcagacgaaagaagagacgcaatatgctggccatc
tttggtttccgtaggaaccgcaactcaacgctctccaatcagggaccagattctggcgga
gacggatgtggggaagagtgtcgcactgtcgccatggcacccaccgggacagccactgag
aatgtctacacgctgctgcagccccctctctctgctgccaggacaggctctcctggtgag
gggggtgatgtggaggaccagaggttggaggagccagtgggcctgagcctgcagccagtg
cagagcataccaccacagcctggcatgccaggtagcagacaccccttctactcacccagc
cagcaatcggagctagagacagagcacgagcaacctgcagatacagacagacaggtggac
agacagtggacagaggacagatgggtggacagacagtggacagaggggaatcacacagac
agagagaggacattaataagaccggctgacagacaggctgaacggcactggccagaggac
agactgtcagacaaaacatggacagagggaagaacggcagaaagacagatggacagatat
tggacggagagaaggcatgcagatagacacatggaaagacagtggacagttgacagacac
acaccgagacagatggacagacagtttgatcgacatagacagtggacggtgagcagacaa
cagacagacagaacgtgggcagagggtcgaccgaaagacatacagatagacagacagtgg
atagacagcaggcagtcaggcagacagactgacagacaagcccagagacaacatctggct
cagagtcctctgcccccttacccatcagacaggactccatcacctaaaagtgagactgac
tctcagaaaaacatggacagacagaagtactctgacacacagatggacagacacctgcgc
tcagacactgctgtaggacaggtggaaggatggagggatggtggaggggttccccctgga
cgggtttctacgagtgcatctaaaccagaccctcctccccagagcagcaaacccaacctg
tccaaactgagacagagacatctacaggagagctctgaggaggaagcaggcggagagagg
gatggtggaagaatggaaaggaaagagagagacagagatgcagagggacagcctcctccc
attcctgaaaagccaaaaacatcatcctatgtgtcttctctaaacgagtatgccaatgaa
aggccgatccggcctcctgcatcatctgcattcagaaagccattgctgggattggcctac
agggctgtcagccaaggtgaggaagcagtgaggcctcaagcccacgtgaaaccccagagg
aacagaaaggctatgtcttgtgacacaggcactgacagggatagccctaataatcttgag
aagcccccaaatcgcaaaccccctgtgaaaaaacctagactaccccagaacagaaacaaa
tccttggactatcctgacagtgtcaacttagcgtctggtaacagcgagctgttgtga
DBGET
integrated database retrieval system
