Salmo salar (Atlantic salmon): 106560344
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Entry
106560344 CDS
T04363
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106560344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sasa03021
]
106560344
03036 Chromosome and associated proteins [BR:
sasa03036
]
106560344
Transcription machinery [BR:
sasa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
106560344
Coactivators
SAGA/TFTC/STAGA complex
106560344
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
106560344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
106560344
NCBI-ProteinID:
XP_013978656
UniProt:
A0A1S3KIV6
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All DBs
Position
ssa10:35940245..35958331
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AA seq
812 aa
AA seq
DB search
MPTTLNSANETQNQAEKSASPANSGSGTANISDTIVQVGATVKARTPASCPAIPAFISKG
TTKDPDPPETQPQNANNGSSATQLPLSVVHVAPTTATVAVAPVQASAQPVTSSTTIKSVV
SNLPPTVVMITTGPRPISPVVAGPRVSSPTVTMSAQAPARMSSPLGPSVTRVATATQAPG
KAAVIAIPRPTTFQQPAASIRPPQTTSVQLPANFQIPPGMVLIRSDSGQLMLVSQQALAA
AQGLAARTPGTGTSPSPRPLTTQVSAATVVRKAENPGVIRVPPPPSPHVTTAQSTPLVKV
VGATPTPPAGQIQIPRPMIRPVAPVTVTRSPGPGPLIIPTKPTNTPRATPPTITPEVLEN
VKKCKNFLVTLIKLASSGTHSADMAKNVRELVKSLLDGRLEPEEFTDQLYRELKSSPQPY
LVPFLKKSLPAVRQLTPNPQLFIQEVDQPRPQAPTASKAPAPTAGRTPTLLSTNSRPAHL
SAASGQSIKSTQLVIQQPRGVAYKPAVTNPAPARTYLSVQNRSLSKPMVIQSGQHYNTGA
VVRRTPFLVPPPPAQRHPFKDSVGSFREEDDINDVASMAGVNVSEENARILATNSGLVGS
VERSCQDKPFLSPAPLLTHILHTGEKFGVSEVASDVVSLVSHATQERLRDLLEKVTVVAQ
HRKMALKEDYSHVQTSDVRSQLHFLEELERLEKQRRDDEERETLLRVARSRCNTDDPDQQ
LLKQRAKELQQLEQAQLQHREANLTALAAIGPRRKRPLDSNGNQVGPGGIMSVLQRAGVQ
RVTGVSLRDLLFCLEQDPPLRHSLTLYKGLLR
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgccaaccaccttaaactccgcaaatgaaactcaaaatcaggcagagaaaagtgcctcc
ccggcaaacagtggaagtggaaccgcgaatatctcggacactattgtgcaggtgggagcg
acagtcaaagcccggacacctgccagttgccctgcaatacccgccttcatttcgaaaggt
acaacgaaagaccccgaccctcccgaaacccagccacagaacgcaaataatggatccagt
gccacccagcttccgttgtccgtggtgcatgttgcacctactaccgccaccgtggctgtc
gcacctgtccaggcaagcgctcaaccggttacgtcatccacaaccataaagtcagtcgtg
agcaacctgcctccaacggtggtcatgataaccacgggaccgagacccatttctccggtg
gttgcaggaccgagagtgagctctccaacggtgaccatgagcgctcaggcaccggcgcgc
atgagctctcctttgggaccatcggtgactcgagttgccaccgcgacccaggcaccgggg
aaggctgcagtgatagccataccaagaccaacaacttttcagcaaccagctgcatcgatc
agacccccacagaccacgtctgtccagcttccagccaactttcaaatcccgccaggcatg
gtgctcatccgtagtgacagtggccaactgatgctggtgtcccaacaagctttggctgca
gcccagggcctcgcagctagaactcctggcactgggacctctcctagccctaggccacta
accacacaggtgtctgcagcgactgtcgtgagaaaagctgagaatccaggtgtgatcaga
gtgcctcctcctcctagcccccatgtgaccacagcacagagtacacccttggttaaggtg
gtaggggctactccaacccctcctgcaggccagatccagatccccaggcctatgatccgc
ccagtggctcctgtcacagtcacccgttctcctggccctggtcctctcatcatcccaacc
aaacccaccaacacccccagggccacaccccccaccatcacacctgaggtcctggagaat
gtgaagaagtgtaagaacttcctggtgacgctgattaagctggcctctagtggaacccac
tctgctgacatggccaagaacgtccgagaactcgtcaagagcctgctggatgggagactt
gaacctgaggagttcactgaccaactctaccgtgagctcaagtcttctccccagccctac
ctggtaccctttctcaagaaaagtctcccagctgtgcggcagctcacccccaacccacag
ctcttcatccaggaggttgaccaacccagaccacaggctccaaccgcctccaaggccccg
gcccccactgcaggccgcactcctacccttctctccaccaactctaggcctgcccacctt
agcgctgctagtggccagtcaatcaaatccacccagctagtgatccagcagcctagaggt
gtggcgtataagcctgctgtgacaaaccccgccccggcccgtacatacctgtctgttcag
aacaggagcctgtccaaacctatggtcatacagtcaggacagcactacaacacaggtgct
gttgtcaggcgaactcctttcctggtcccgccgcctccagcccagagacaccccttcaag
gatagtgttggttctttcagggaggaggatgacatcaacgatgtggcctccatggctggg
gtcaacgtgagtgaggagaatgcccgtatcctagcaaccaactctgggctcgtgggctct
gtggaacgatcctgtcaggacaaacccttcctctccccagccccgctgctcacacacatc
ctccacactggtgagaagtttggagtgtccgaggtggcttcagacgtggtcagtctggtg
tctcacgccacacaggagcgtctcagagacctgctggagaaagtcacagtggtggcacag
catcgcaagatggccctcaaggaggactacagtcacgttcagaccagtgacgtgcgttcc
cagctccacttcctggaagagctggaacgtctggagaagcagaggagagacgacgaggag
agggagacactgctccgcgttgccaggagtcgctgtaacactgatgacccagaccagcaa
ctactgaaacaacgggccaaagagctccagcagttggagcaggctcagctgcagcacaga
gaagccaacctcactgccctggctgccatcggacctcgcaggaagagaccactggactcc
aatggaaaccaggtagggccaggtggcattatgtcagtactacagagggctggggttcag
agagtgactggggtctctctgagggacctactcttctgtctggaacaggaccctcctcta
cgacactctctcactctctacaagggcctgctcagatag
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