Salmo salar (Atlantic salmon): 106560370
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Entry
106560370 CDS
T04363
Name
(RefSeq) interferon regulatory factor 4-like
KO
K09445
interferon regulatory factor 4
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106560370
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
106560370
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Ortholog
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GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
106560370
NCBI-ProteinID:
XP_013978704
UniProt:
A0A1S3KK48
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Position
ssa10:complement(38037788..38046822)
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AA seq
468 aa
AA seq
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MNPDSDYGMSTVSCGNGKLRSWLIEQVETGKYAGLVWENDDKSIFRIPWKHAGKQDYNRD
EDAALFKAWALFKGKFREGIDKPDPPTWKTRLRCALNKSNDFEELVEKSQLDISDPYKVY
RIIPEGAKRHFLLSGSKQEDGGSPQTPPSYPMHPSYPALQTPMSGYMSSAERGWMRDYLP
EQTVLPELPYAQCSYPSRSLPWAQGPSMDNGYQITGSFYTYPTDGQPSPFTLDTSMRSAE
ALSDMRLHVSVFYRDSLWKEVTTSSPEGCRITPCSPDDKLYSPTGGPDLVPLPLDSLPAL
GRGEECPPSPPGGTLERGVLLWMAPDGLYARRLCQERVFWEGGLSPYGDKPNKLEREHTC
KLLHTQDYFAELQGYALHGRPPPRLQVLLSFGDECLDPQRQRRTLTVQVEPMFARQLLYY
TQHQQTSGHYYRSYDLSHPGVTEHSMTPALTEDYQRVITHHHSNTLQD
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaatccggattcggactacggcatgtctacagtgagctgtggaaacgggaagctccgc
tcgtggctgatcgagcaggttgagaccgggaagtacgcggggctcgtgtgggagaacgac
gacaagagcatctttaggataccgtggaagcacgcgggcaagcaggactacaaccgggac
gaggatgccgctctcttcaaggcttgggcgctgtttaagggcaagtttcgtgagggcatc
gacaaaccggacccaccaacgtggaagacgcgcctgcggtgcgcactcaacaaaagtaac
gacttcgaagagctcgtggaaaagagtcaactggacatctcagacccctacaaagtctac
cggatcatacccgagggcgccaagagacatttcttgctatcaggatccaaacaggaggat
ggtggcagcccgcagactcccccgagctatcccatgcacccctcctaccccgctctacag
actccgatgtctgggtacatgtccagtgcagagcgaggctggatgagggactatcttcca
gagcagaccgtgctccctgagctgccctatgcccagtgttcctacccctcacgcagccta
ccctgggcccagggccccagcatggacaacgggtaccagatcacagggtccttctacacc
taccctactgatggccagccctcccccttcacactggacaccagcatgagatcagctgag
gcactctcagatatgcggttacatgtgtcagtgttctaccgggactccttgtggaaggag
gtgaccacctccagtcctgaaggctgtcgcatcactccctgctctccagacgacaagctc
tattcccccactggaggtccagacctggtgcccctacccctggatagcctcccagctctg
gggaggggggaggagtgcccccccagtccccctggtggtactctggagaggggcgtgctg
ctatggatggccccagatggcctctacgctcggcggctgtgccaggagagagtgttctgg
gagggagggttatcgccctacggagataaacccaacaagctggagagagaacacacctgt
aaactactgcacacacaggactactttgcagagctccagggctatgccctccacggccgg
ccccctccacgtctccaggtgctgctgagttttggagacgagtgtctggacccgcagaga
cagaggaggaccctcactgtacaggtggagccaatgtttgccaggcaactcctatactac
acccagcaccagcagaccagcggacactactaccgcagctacgacctctcccacccaggg
gtcacggaacacagcatgacacctgctttaactgaggactaccagagggtcatcacgcat
caccatagcaacaccctgcaggactga
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