Salmo salar (Atlantic salmon): 106560384
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Entry
106560384 CDS
T04363
Name
(RefSeq) trafficking protein particle complex subunit 8-like
KO
K20305
trafficking protein particle complex subunit 8
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106560384
Membrane trafficking [BR:
sasa04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
106560384
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_1st
Ig_TPPC8_3rd
Ig_TPPC8_2nd
Ig_TPPC8_C
SNAP
Motif
Other DBs
NCBI-GeneID:
106560384
NCBI-ProteinID:
XP_013978731
UniProt:
A0A1S3KJ34
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All DBs
Position
ssa10:complement(37027177..37123422)
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AA seq
1528 aa
AA seq
DB search
MAQCVQSVQEFIQDSFVPMVAVLCSEDAEKVTRKNNLNFSELLRPFCRLTSEGHMRDPNN
QVQVVKNLRISVNNVVTRPSVPTSGVHGPAQRRLLSEVVSACQPAEGGVANVITARDYDL
NISDCSVKASVPWYSDWRDTLTELSTSKHYTATTPWFEAYRESFLQSMPASDHEFLNHYL
ACLLVVSSSEPVPVEQFLKLSQEQHRIQHNGEYTNPKWFIPNTLKYYVLLHDMSQGDEQR
ADSVYEDMKQRYGSQGCYLLKINSHTAAAGTDEQIPDPWSQYLNKSSLQSQDQSEEPAPT
PVVVNNTAVENNVGGAPEMDGHDSADNDGVSVNSLDNTHPLQLETAIDMPGSLDSLRAVA
VETKTTTVYTGVAAGTSHGACLTLNDHNRLRLFIQEFTFRGLLPHIEKNIRQLNDQLVSR
KGLSRSLFSVTKKLFGGGKVPEKSIAELKNTSGLLYHPEAPELQIRKMADLCFLVQHYEL
AYSCYHTAKKDFLSDQAMLYAAGALEMAAVSAFLQGGAPRPYPAHYMDTAIQTYRDVCKN
KVLAERCALFSAEILKSQSKYSDAATLLIKMTSEDSDLCSALLLEQAAHCFINMRNPMVR
KFAFHMILAGHRFSKAGQKRHALRCYCQAMQVYKGKGWSLAEDHINFTIGRQSFTLRQPE
NAVSAFRHILTNDSQQTSTQQGAFLREYLYVYRNVPGVREVALPQLPLPCINSSATRVYF
GHERRLAEGEKQAATHVSLDQEFDRDLAAVWQDLEEQVVAAANRGLVPSTFYPTQCCLNS
QTDNLHFPLAVVEEPIIVEVAFRNPLKVPLVLSDLSLLWKFTLKDFSRPQPQDIMVEDAV
TISNEKEAITPRTVHKDDIITTEVIPEFCMSPEETRVARLKLLPRQTGQLNILGLVYNLA
STPSTGDSTINSNTFSQSQGPSATAGTSVRGRQDLEIQGPRLNQTKEEKTSVSHGPDRRL
DPTITPPMPLLEVFFLQFPTALLCGEIRKAYVEFCNVSHVPLCGLRVASTHPNFFTFGSS
SLATPLTPLSPTSFENCSAYKTLATPPGATPGSVTAVTLVSAADFGSGGGGVFGTGGKRV
AEIPLGEGTLTPGESTQLPLWLRGPDQEGVHEINFLFYYESAEKGGKIRWGEQSGILTTQ
VKISHRVLRHTVFICASRSLSVRATACRSNTLPEEEREEGRKGSMLVFVDVENINTSEAG
VREFHIAQVSSSSKQWRLHKCINPAEDKDCKLTTRERGKLCFRATRCKPHEATSKSLEKY
TFADLSLGNEQIISSTTPCADFFFRRCQPSESWRPLIAVETQGRHSRSQGAGPGGGAEDL
TGVVRKCNEVDLDIIVLWKAFVVEDNKQVILEGQLHVALQTIGKEACSLTQKEEAQEMVL
LKFKPELPPPTTRPSMEQLSHLIKTNLHYPESYSHPFVQKSLCMVPVTLTLSNCSLAQVD
AIIDLRHKTTSPESLEVHGSFTWLGQTQYKLQLRAQEVMRLPLRAGFLHAGVYNLGTPRV
FAKLADQGAMCETSQQTATPALIIINST
NT seq
4587 nt
NT seq
+upstream
nt +downstream
nt
atggctcagtgcgtacagtctgtgcaggagttcatccaggactcgtttgttccgatggtg
gctgtcctgtgcagcgaagatgcggaaaaagtgactcgtaaaaacaaccttaatttctcg
gagctgttaagacctttctgccggttaacctccgaaggtcacatgagggaccctaacaac
caggtgcaggtggtgaagaaccttcgcatcagtgtcaacaacgtggtgacacgcccgtct
gttcccacctccggcgtccatggccccgcccagcgacggctgctcagcgaggtggtgtcg
gcgtgccaaccagcagaggggggtgtggccaatgtcatcaccgccagagactatgacctt
aatattagtgattgctctgttaaagctagcgtcccctggtacagtgactggagggacaca
ctaacggaactcagcacctccaagcattatacagccacgactccctggtttgaggcgtac
agggagagcttcctccagtccatgcctgcctctgaccatgagttcctcaaccactacctc
gcctgtctgttggtggtgtcgtccagtgagcctgtaccagtggagcagttcctcaagctg
tctcaggagcagcacaggatccagcacaatggagagtacaccaaccccaagtggttcatc
cccaacacactgaaatactacgtcctcctgcacgacatgagccagggggacgaacagaga
gctgactctgtgtatgaggatatgaagcagaggtatggttctcagggttgttaccttctg
aagatcaactctcacacagcagcagcaggaacagatgaacagataccggacccatggagc
cagtaccttaacaagagcagtctgcaaagccaggatcagtctgaggagccagccccaacc
cctgtagtggtgaacaacacggctgtagagaacaatgtaggaggagcaccagagatggac
ggacatgactcagcagacaatgacggagtctctgtaaacagtctggacaacacccaccct
ctccagctggagactgccattgacatgcccggtagcctggactccctcagggccgtcgcc
gtggaaaccaagactacgacagtctacacgggagtggcggcgggcaccagccatggggca
tgtctaacgctgaacgaccacaaccgcctcagattattcatccaggaatttaccttcagg
ggactactacctcacatagagaagaacatcagacagctcaatgaccagctggtctccagg
aaaggcttgagtcgttctctgttctcagtcactaagaagttgtttggaggagggaaagtt
ccagagaagagtattgctgaattgaagaacacttccggccttctttatcatccagaagcc
cctgagctgcagatcagaaagatggctgacctgtgtttcctggttcagcactatgagctg
gcctacagctgctaccacacggccaagaaggacttcctatctgaccaggccatgctctat
gctgctggggcgctggagatggcagcagtgtctgcgtttctccagggtggggctccacgg
ccgtatccagcacactatatggacacggcaattcagacctacagagatgtgtgcaagaac
aaggtcctagctgagcgttgtgctttgttcagtgctgagatactgaagagtcagtccaag
tactccgatgctgctaccctcctcatcaagatgaccagtgaggactctgatctgtgttct
gccctcctattggagcaggcagcccactgcttcattaacatgcgaaaccccatggtcagg
aagtttgccttccacatgatcctggcaggacaccgtttcagcaaggcaggacagaagcgc
catgcgttgcggtgttactgccaggccatgcaggtatataagggtaaaggctggtccctg
gctgaggaccatatcaacttcactatcggccgccagtcctttacgctgcgccaaccagag
aacgctgtctcagccttcagacacatcctcaccaacgacagccagcagacctccacacag
cagggcgccttcctccgggagtacctctacgtctacaggaatgtgccaggggtgcgtgag
gtggcactaccccagcttcccctaccctgcatcaacagctctgctaccagggtctacttt
ggccacgaacgccgcctggcagagggtgagaagcaggctgccacccatgtgtccttggac
caggagtttgaccgggacctagctgccgtgtggcaggacctcgaggaacaggtggttgcc
gccgccaaccgtgggcttgtcccgtcaacgttctaccctacccagtgctgcctcaacagt
cagacggacaatctccacttcccgctggctgtagtagaagaacccatcatagttgaggtg
gcattccggaaccctctaaaggttccactggttctctcagacctctcactgctctggaag
ttcacgctcaaagacttctctcgaccacaaccgcaggacatcatggttgaagacgctgtc
accatcagcaacgagaaggaggccatcactcccaggacagtgcataaagatgacatcatc
accacagaagtcatcccagagttctgcatgagccccgaggagacaagagtggctcgtctg
aagctgcttcctcgccagactggtcagctcaacatcctgggtctggtctataacctggcc
tccaccccttctactggagactctactattaacagcaacactttctcacagagccaaggt
ccctcagcgacggcggggacatcggttcgtggtcgacaggacctagagattcagggaccg
cggttgaaccagaccaaggaggagaagacctctgtcagccacggtcctgaccgacgtctt
gaccccaccatcacccctcccatgcccctgctggaggtattcttcctccagttccctact
gccctactatgcggtgagatcaggaaggcctacgtggaattctgtaatgtgagtcacgtt
cccctgtgcggcctgcgggtggcgtcaacgcacccaaacttctttaccttcggaagctcc
tccctagccacacccctcacacccctcagccccacctccttcgagaactgctctgcctac
aagaccctggccacacccccaggagccacgcccgggtcggtaaccgcggtaacgctggtg
tcggcggccgactttgggtcggggggaggaggagtgtttggtacggggggtaaaagagta
gcagagatccctctaggagagggaacgctaacgcctggagaatctacccagctgcccctg
tggctgagaggaccagaccaggaaggagtccatgagatcaacttcttgttctactacgag
agtgccgagaaaggaggaaagatcaggtggggagagcagtctggtattctaactacgcaa
gtcaagatcagtcacagggtgctgcgtcacacagtatttatctgtgccagtcgttctctg
tcggtccgggccaccgcctgccgtagcaacacactgcccgaggaggagagagaggagggg
aggaagggcagcatgctggtctttgtcgatgtggagaacatcaacacaagtgaggctggg
gtgcgtgagttccacattgcacaggtctctagcagcagtaaacagtggagactacacaag
tgtataaacccagcagaagacaaagactgcaaactcaccaccagagagaggggcaagctg
tgcttcagagcaacacgatgcaaaccccacgaagctacctcaaagtcactagagaagtac
acctttgcagacctgagccttggaaatgaacagatcatcagctccaccactccgtgtgca
gacttcttcttccggaggtgtcagccctcagagtcttggagaccgcttattgccgtggag
acacaggggagacattccagaagtcagggggcgggacctgggggtggggctgaggattta
acaggtgtggtcaggaagtgcaacgaggtggacctcgacatcatcgtcctctggaaggca
tttgttgttgaagacaacaagcaggtgatcctggagggacagcttcacgtggcactacag
accattggcaaagaggcctgctccctcacacagaaagaggaggctcaagagatggtgctg
ctgaagtttaaaccagagcttcctcctcctacgacacggccctccatggaacagctttcc
cacctcatcaagaccaacctgcactaccccgaaagctacagccaccccttcgtacagaag
agtctctgtatggttccagtcactttgacgctatctaactgctccctggctcaagttgat
gccatcattgaccttcgacacaaaactaccagtcctgagtctcttgaggtgcacggttcg
tttacatggctgggccagactcaatacaagctgcagttgagggcacaggaagtgatgcgg
ctgccgctgagagccggcttcctgcatgcgggcgtctataacctgggaactccacgggtc
ttcgccaagctggcggaccagggagccatgtgtgagaccagccagcagacggccacgccc
gcactaatcatcattaacagcacctga
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