Salmo salar (Atlantic salmon): 106560416
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Entry
106560416 CDS
T04363
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD-like
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04217
Necroptosis
sasa04622
RIG-I-like receptor signaling pathway
sasa04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
106560416
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
106560416
04625 C-type lectin receptor signaling pathway
106560416
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sasa01002
]
106560416
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106560416
Enzymes [BR:
sasa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106560416
Peptidases and inhibitors [BR:
sasa01002
]
Cysteine peptidases
Family C67
106560416
Ubiquitin system [BR:
sasa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106560416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
GatD_N
Motif
Other DBs
NCBI-GeneID:
106560416
NCBI-ProteinID:
XP_013978779
UniProt:
A0A1S3KJL4
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Position
ssa10:39064133..39077307
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AA seq
762 aa
AA seq
DB search
MDACDVKMYYIIIEKPGLPMVSVNAGHICYIQESRYMSRLSRSESLEELPVICMGSNLDK
FLKVNHLNSVTAKEAELLQAIEEDSERLKWYLERDALDTALGLTKDTPVTVELDGKWLRG
IVRYIGRITEPKHTDPIVGTFFGIELQGEDKGKGPTDGTYLSKPLFSCKKDCGIFAPFSR
VKPMVSKPKLVSKCLTFPAAQLATQPSPQQAHHQPLSTGDRVTFFKGEDTLHGMVMDLEE
KEGRTLVIISTDRDEKITLPLDSVIKGDLLEHEPEPMESDKEEVHPLGLGVDSLVEVTLG
IGPGYGTIRWIGTLPGQKGTYAGLELEDGYTGVSNGTFKDHRFFRCLPRRGLFVKLLSCR
PDSRFQGASANVLQEREEVRSPGVLPSSPIASEQVERMLIGRMKGIQGHINSCYMDSALF
SLFSCSSVLDSLLFKSTKPRDAPIQSTLLHDIVNPLRSKGFVEGRHIMKLRQQLQELGYC
HTFTTEEKDPEEFLTLIMHHIFCLDPLLKLSAGGKVQDSYCYQIFLDNNHSLVLPTVQHL
LEHSFHSAGLKLAEVPSCLILQMPRFGKKFKMFQKIIPSLELDITDLLSEGPQQCVLCGQ
LAYEECVDCFRDPVFSRTGFKVFCRTCSSQVHSHPERLSHSPSTLQLPEGYPAPTTLRAP
SRERLELFAVLCIETSHYVSFIKHGPNSTDWIFFDSMADRHGERDGFNIPQVQACPEVGL
YLVMSPAELANQVPRDMKGVAKRLFCDAYMYLYQSTSMSLYR
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggacgcatgtgatgtgaagatgtactacatcatcatagagaaacctgggttacccatg
gtgtccgtcaatgctggccacatctgttacatccaggagagcaggtacatgtcaaggctt
agcagatctgaatctctggaggaattgcctgtcatctgtatgggctccaatttagacaag
ttcctgaaggtaaatcacctaaattcagtgactgctaaggaggcagaactcctgcaagcc
atagaagaggactcagagagactgaagtggtatttagagagggatgctttggatacagcc
ctgggtttaactaaggatacacctgtcactgtggagttggatgggaagtggctacgggga
attgtacgttacatcggaagaataacagagccaaagcacacagaccccatcgtaggaacc
ttctttggtatcgaactacagggagaagacaaaggaaagggaccaacagatgggacctat
ctgtcaaaacccctattctcctgcaagaaagactgtgggatttttgctccattttccaga
gtgaaacccatggtttccaaacccaaattggtgtccaagtgtctgacctttccagcagcc
cagctggccacgcaaccgtcgccccaacaggcccaccatcagcccctctccaccggagac
agagtcaccttcttcaagggcgaggacaccctccatgggatggtgatggatctggaggag
aaggagggcaggaccttagtcatcatctctactgaccgggatgagaagatcactctaccg
ctggacagcgtcatcaaaggggacctgcttgaacatgagcctgagccaatggaaagtgat
aaggaggaggttcaccccttggggcttggtgtagactctctggtggaggtgactctgggt
ataggacctggctatggaaccatccgctggataggcactttgcctgggcagaaaggaacc
tacgctggactggagctggaggatgggtacactggggttagtaatggtacctttaaagac
catcggttcttcagatgtcttccaagacgaggtctcttcgtcaagcttctatcctgccgg
cctgactcccgcttccagggggcatcagccaatgtccttcaagagcgagaggaggtccgc
agccctggggtgctcccctcctcccccatcgcctctgagcaggtcgagaggatgctgatt
ggtcgaatgaaggggatccagggccatataaactcttgctacatggactcagccctcttc
agtctgttctcctgttcctcagtgttggactctctgctgtttaagtcaacaaagcctagg
gatgcccccatccagagtaccctgctacatgacatcgtcaacccgctccgcagtaaaggt
tttgtggaagggagacacattatgaagcttcgtcagcagctgcaggagcttggttactgc
cacacattcaccacagaggagaaagatccagaagagtttcttaccctcattatgcaccat
attttctgtctggatcctctcctcaaactgtccgctgggggaaaggtccaggacagttac
tgttatcaaatcttcctggataacaaccacagcctggttctgcctactgtccaacacctg
ctggaacactccttccacagcgcaggactcaaactggcagaggtgccgtcttgtctgatt
ctccagatgcctcgctttgggaagaagttcaagatgtttcagaagatcatcccttcactg
gagctagacattactgaccttctctctgaaggtccccagcagtgtgtgttgtgtggtcag
ctggcatatgaggagtgtgtggactgcttcagagacccagtcttcagcaggacaggattt
aaagtgttctgcaggacctgctcctctcaggtgcactctcaccccgagcggctgtcccac
agcccctccaccctgcagctccctgaggggtaccccgcccccactaccctccgagcccca
tccagagagagactggagctgtttgcagtgctgtgcatagagaccagtcactatgtctcc
ttcatcaaacacggcccaaacagcacagactggatcttctttgacagcatggctgacaga
catggagagagggatggcttcaacattccccaggtgcaggcatgtccagaggttggcttg
tacctggtcatgtcacccgccgagctggccaaccaggtgcctcgggacatgaagggcgtg
gctaagcgtctgttctgtgatgcctacatgtacctgtaccagagtaccagcatgagcctc
taccgctga
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