Salmo salar (Atlantic salmon): 106560482
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Entry
106560482 CDS
T04363
Symbol
atg4c
Name
(RefSeq) autophagy related 4C cysteine peptidase
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04136
Autophagy - other
sasa04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106560482 (atg4c)
04136 Autophagy - other
106560482 (atg4c)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sasa01002
]
106560482 (atg4c)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106560482 (atg4c)
03029 Mitochondrial biogenesis [BR:
sasa03029
]
106560482 (atg4c)
Peptidases and inhibitors [BR:
sasa01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
106560482 (atg4c)
Membrane trafficking [BR:
sasa04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
106560482 (atg4c)
Mitochondrial biogenesis [BR:
sasa03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
106560482 (atg4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
106560482
NCBI-ProteinID:
XP_013978917
UniProt:
A0A1S3KJY8
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All DBs
Position
ssa10:complement(42954779..42965917)
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AA seq
466 aa
AA seq
DB search
MENKGTDEVEKLKTKFLSAWHNVKYSWALKSKTYFSRNSPVFLLGKCYHFKADDEDSPTE
SCSTEVCDAPPATGGDDVEAFRRDFASRVWLTYREEFPALPGSSLTSDCGWGCMLRAGQM
MLAQALILHFLGRDWTWSEALALQPLDTETWTTSAAKRLVASLEASLQGERPSDPGPMLH
APGAPGRAEEADIHQREVYHRTLVSWLGDSPQAQLGVHRLVELGLVSGKRAGDWYGPAVV
AHILRKAVEEATDPGLSGITAYVSQDCTVYSADVIDSHQSCVAGGADALPLTDSRAVIIF
IPVRLGGEKTNPEYFSFVKSILSLEYCIGIIGGKPKQACYFVGFQDDSLIYMDPHYCQSF
VDVSTNHFPLQSYHCPSPKKMPFSKMDPSCTIGFYSRSVQDYQTISHELSKVLLPSANEK
YPAFTFMQGHGRDYNLSAELTPEKREWPFIRDPQSSAATAGDFVLL
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggagaataaagggactgatgaggtggagaaattgaagaccaagttcttgtcagcatgg
cacaatgtgaagtacagttgggctttgaagtcaaaaacctactttagcagaaattcccca
gtgttcctcctggggaaatgctaccattttaaggctgacgatgaggacagcccaacagag
agctgcagcactgaggtctgtgatgcaccccccgccacagggggtgacgacgtggaggcc
ttccggagggactttgcgtcccgtgtgtggttgacctacagagaggagttccctgccctg
ccaggctcctccctaacctctgactgtggctggggctgtatgctgagggcaggacaaatg
atgctggctcaggccctcatactacacttcctgggaagagactggacgtggtcggaggcg
ttggccctccagcctctggacacagagacctggaccaccagtgcagccaagcgtctggtg
gccagcctggaggcctcactgcagggagagaggccctcggacccaggaccaatgcttcat
gctccaggggcccctggaagagcggaggaggctgacatccaccagagggaggtctaccac
cgcaccctggtgtcctggcttggggacagccctcaggcacagctgggtgtccacaggctg
gtggagttaggcctggtgtctgggaaacgggcaggggactggtatggccctgccgtggtg
gcacacatcctgagaaaagctgtagaggaggcaacagaccctgggctgtcgggcataact
gcttatgtctcccaggactgtacagtttacagtgctgatgtcatcgatagccaccagtcg
tgcgtggctgggggagcggatgccctgccccttactgacagccgggcggtcatcatcttc
atcccagtccgactggggggagagaagaccaacccagagtacttcagctttgtcaagagc
atattgagtctggagtactgtattggtatcatcgggggcaagcccaaacaggcctgctac
ttcgtgggctttcaagatgacagcttgatttacatggaccctcattactgtcagtctttt
gtggatgtcagcactaaccatttccctcttcagtcgtatcattgcccgtcgccaaagaag
atgcctttcagtaagatggaccccagttgtaccataggcttttactcaagaagtgtccag
gactaccagacaatcagccacgaactgtccaaggtgttgctgccatcagcgaatgagaaa
tacccagcattcactttcatgcaaggtcacggaagagattacaacctttctgcggagttg
accccggagaagagggaatggccgtttatccgtgacccacagagttctgccgctaccgca
ggagacttcgtgctgctctga
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