Salmo salar (Atlantic salmon): 106560577
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Entry
106560577 CDS
T04363
Name
(RefSeq) occludin-like
KO
K06088
occludin
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03272
Virion - Hepatitis viruses
sasa04514
Cell adhesion molecules
sasa04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
106560577
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
106560577
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
106560577
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sasa01009
]
106560577
Protein phosphatases and associated proteins [BR:
sasa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106560577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
DASH_Dad1
DUF349
DASH_Dad2
PRP1_N
Motif
Other DBs
NCBI-GeneID:
106560577
NCBI-ProteinID:
XP_013979064
UniProt:
A0A1S3KL48
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All DBs
Position
ssa10:complement(47712389..47757532)
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AA seq
546 aa
AA seq
DB search
MFEKQRYDSPPVYSPPYSPESNGYGPPQSYHPPRSEFDPYPPPPGSYYMEEKPQHFYKWI
SPPGIVKAMFGTIIVLCVGIFACVASTLVWDMQYGMGGMGSYGGGMGYGGGYGGMGGGYG
SSYGSGYGGGYGGGYGNYGNSYPTPYSAKSTMIAMAAINFFVALGFFVAGFSKSTTFRSR
KFFLVVLVVSVIMAVIQGIITIVYIVGVNPMAQSSQNMMYNPMLMMCQNLYGSSYSNMGG
VGGFGMYNQYLYHYCYVDPQEGVAMVCGFLVTAALVVAAFFSHKTRGKIWRYGKPNIYWE
QPPETGGLVSEGRDVKDWVNNVEDGQSTQGAPTVVLSEKSVPLNASANSIISYPTKADSR
VYTGDTYNDDVYSEHLASRPSDQPSQGASSSPSEEAGGVRKPSANRGKRRRRNPELDESQ
YETEYTTGGETGNELDPEEWESVYPEITSDGQRQEYKREFDADLRKYKHLCAEMDDISDQ
MNKLSRQLDTLDETSAQYQVVAEEYNRLKDVKRTPDYQAKKLECRKLRHKLFHIKRVVKA
YDKSLS
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaagcagcgttacgacagccctcccgtctacagtcctccatacagcccggaa
tcgaatggttacggccccccacaaagctaccacccgcccaggagtgagtttgacccatac
ccacccccaccgggctcctactacatggaagagaagccccaacacttctacaagtggatc
tctcctcctggcatcgtcaaggccatgtttggcacaatcatagtgctctgtgtggggatc
tttgcctgtgtggcctccaccctggtctgggacatgcagtacgggatgggggggatgggc
tcctacggcggagggatgggctacggtggcggttatgggggaatgggcggcggctatggc
tccagctacggctctggctatggaggaggctatggaggaggctatggtaactatggtaac
tcctacccgacaccttactcggccaaaagcaccatgatagctatggcggccatcaacttc
tttgtggcgctgggattcttcgtggccggtttctctaaatcgaccacgttcaggagcaga
aagttcttcctggtggttctggtggtcagtgtcatcatggctgtcatccagggcatcatc
accattgtgtacatcgtaggggtgaaccctatggcacagagctctcagaacatgatgtac
aaccctatgctgatgatgtgccagaacctgtacggaagcagctattctaacatgggtgga
gtgggcggtttcggcatgtataaccagtacctctatcactactgctacgtggacccacaa
gagggtgtagccatggtgtgtggcttcctggttaccgctgccttggtcgtggctgctttc
ttctcccacaaaaccagaggcaagatctggcgctacggcaagcccaacatctactgggaa
cagccccctgagactggaggactagtttctgaaggcagagatgtgaaggactgggtgaac
aatgtagaggacggacaaagtacccagggtgcacctaccgtggtgctgtcagagaagtcc
gtccccctcaatgcctcagccaatagcatcatctcctacccgaccaaggctgacagcagg
gtgtacactggagacacctacaatgatgacgtgtattcggagcatctggctagccgtccc
tcggaccagccctcccagggggccagttccagcccctctgaggaggcagggggggtcagg
aagccctctgccaacagggggaagaggcgccggcgcaaccctgagctggatgaatcacag
tacgaaacagagtacaccacgggaggagagactggcaacgaactggacccagaggagtgg
gagagcgtctacccagagataacgtcagacggccagcgtcaagagtacaagagggagttt
gatgccgacctgaggaagtacaaacacctgtgtgctgagatggatgacatcagtgaccag
atgaacaaactcagcaggcagctggacacactggacgagacctccgcccagtaccaggtt
gtggcagaggaatataatcgactgaaagacgttaagaggacaccagactaccaggctaag
aagctggagtgtcgcaagttgagacacaaactgttccatatcaaacgtgtggtcaaggcc
tacgacaagagcctttcttaa
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