Salmo salar (Atlantic salmon): 106560592
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Entry
106560592 CDS
T04363
Symbol
hps3
Name
(RefSeq) HPS3, biogenesis of lysosomal organelles complex 2 subunit 1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106560592 (hps3)
Membrane trafficking [BR:
sasa04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
106560592 (hps3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
106560592
NCBI-ProteinID:
XP_013979100
UniProt:
A0A1S3KKF4
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Position
ssa10:48651159..48681740
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AA seq
1072 aa
AA seq
DB search
MVHVYNCHPFASQQIVPTDQEPGLVCCGGGALFVVSAGGCKIEAFQLGEDGCPLICRFAT
MGTVQNILHSEIGDYLVTIEEKNNAPYLRAYTNWRYQAAEKTRVGVRLLGHFLRGSSMRG
APKEQMEIIEIPLFERPLCVACCGVTGDLLVGCPKSLVLFSLKRQALNDKLSILDFERCL
IIHLPGLSPQQVAICAGYIALQTELEVLVVKLERLPGAAFTQKSADKKPQDHSLVPQDMI
TGAEHDNETEVRREGLAGHRDQDDFFIFPKHQELLGDRAKDCGVKVSLEWTGMESEAGGN
LIITYILYRRFAPDFFQDCSVEETRLHSLQFHPVFTSNQEVCVEGGRGVEPTCLFCFFSL
PKTGYLYSVRGGVQMVSAYQYPEKAQQAVLTDLFLHIITKNALQCFSVRCAAVAARAEDP
YIDTTMKACPPITMELCALRIQLFIGLKALCHYQHHIVLLTTADVETREDTERTARRVIE
YKDHKTLRGIFLAVGIEPSTTPALERFLAHSFLNRKSHFTKPQNPSEMGHGWNLYVVNTV
PPLQLYNEMVEYSKTYEETNPLSQSCLHLLSEAHLLLRATLLDPRVGNPVERPQTTGQNL
AQALGYNTTRTAERQELQQAFQESCAQLGDCFSRFDKRDCHLALPYYKMSGLSLTEVISR
NRGLSNSLCGYGKGFLFFLKHSLYEETLELLTEETANEVLDIFGMAEPSQLPHVIASPSM
ARASPDCGLAHLERLESIGAPSVPLTLSKASLALRMADLQLYRQHMGQHTEMLQVYGFIE
EAKLLLHGRGDAVVPTLLARHLRDNQDGLLVAAMVALHENDKVKLDEADLFFQELCGDVS
GPQGGPQLLVDFWEALLMASSQEAVIQELLFRLTTVYIDRVTRRDGRGFKPLKSADDLIN
WCSHYGVLHPWVSILTPAHVNIITEDLHKLQSLLCGPTLDASSILPLLEQLPDGDNAGLS
VHVLCATKLGHYESSIERLLDRCPQAIIPYANHELQNNNMALWWQKLFPELCERTRATQG
ENTILLAALKETLVVVAMELNPLEFLDLLPDDGTVHFFLPHLLECSQRHLMM
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggttcacgtatacaactgccaccccttcgcgtcccagcaaatcgtgccaaccgaccag
gaaccggggttggtgtgctgtggcgggggtgccctattcgtggtgtccgctggaggatgc
aagatcgaggcttttcaactgggtgaagatggatgtcctctcatctgccgcttcgccact
atggggactgtgcagaacatcctacacagtgagataggggactacctggtgaccatcgag
gagaagaacaacgccccctacctccgcgcctacaccaactggcgctaccaggcggctgag
aagacacgcgttggggtgcgtctgctcggtcatttcctgcgcggctcgtccatgcgcggg
gctcccaaggagcagatggagatcattgagattccactgtttgagcgtccgctgtgtgtg
gcgtgctgtggggtgaccggagacctgctggtggggtgtcctaagagcctggtgctgttc
agtctaaagagacaggccctcaacgacaagctctccatcctggactttgagcgctgtctg
atcatccacctcccgggactgtcgccccaacaggtggcgatctgtgcagggtacattgcc
ctgcagacagagctggaggtgctggtggtcaaactggagagacttcctggtgctgctttt
acccagaagtcagctgacaagaagccccaggaccacagtctggtcccccaagatatgatc
actggagcagaacacgacaacgagacggaggtgaggagagagggtctggctggtcaccgt
gaccaggatgacttcttcattttccccaagcaccaagagctcctgggggacagggctaag
gactgtggggtcaaggtctctctggagtggacaggcatggagagtgaggccgggggcaat
ctcatcatcacctatatcttatacagacgttttgctccagacttcttccaggactgcagt
gtggaggagacacgccttcactccctgcagtttcaccctgtgttcaccagtaaccaggaa
gtatgtgtggaggggggtagaggggtggagccgacgtgtttgttctgtttcttctcgttg
cccaagacgggctatttgtacagcgtgaggggcggggttcagatggtctcagcctatcag
tatccagagaaggcccagcaggctgtcctcactgacctcttcctccacataatcacaaag
aatgctctccagtgcttctcagtgaggtgtgcagcagtagcagccagagctgaggaccct
tacatcgataccaccatgaaggcctgtcctcccatcaccatggagttgtgtgctctgcgt
attcagctgttcattggtctgaaggctctgtgtcactaccaacaccacatcgtcctgctg
accacagcagatgtggagaccagggaggacacggagaggaccgcacgcagagtcatagaa
tacaaagatcacaaaacccttagggggattttcctagcagtaggtatagagccttccacc
acgccggctctggagcgttttctggctcactccttcctgaacaggaagtcacacttcact
aagccccagaatcccagtgagatgggtcacggctggaacctgtacgtggtcaacaccgtc
cccccgctccagctctacaacgagatggtggagtacagtaagacgtatgaggagaccaac
cctctgtctcagagctgtctgcacctgctcagtgaagcccacctcctcctgagagccacg
ctcctggacccccgggttggaaaccctgtagagcggcctcagaccactggtcagaaccta
gcccaggccctgggatataatacaacacgcaccgcagagagacaggagctgcagcaggcc
tttcaggagagctgcgcccagttaggagactgctttagcaggtttgataagcgtgactgc
cacttggccctgccctactataagatgtcaggcctgtctctgacagaggtgatctccagg
aacaggggtctgtctaacagcctctgtggctacgggaagggcttcctcttcttcctcaaa
cactccctctatgaggagaccctggagctgctcactgaggagacagccaacgaggtgctg
gatatcttcggtatggccgagccgtcccagcttccccatgttatagccagcccttccatg
gccagagccagccctgactgtggcctggcccacctagagcggctggagtccatcggcgcc
ccctccgtacccctcaccctgtccaaggcttccctggccctacgcatggcagacctgcag
ctctacaggcagcacatgggccaacacacagagatgctgcaggtgtatgggttcattgag
gaagccaagctgctgctgcacggcagaggagatgcggtggtacctactctcctggctcgc
caccttagggacaaccaggacggcctgctggtggcagccatggtggcgctgcacgagaac
gacaaggtcaaactggacgaggctgacctcttcttccaggagctgtgtggggatgtgtca
gggccccagggaggccctcagctgctggttgacttctgggaagccttgctgatggcctcg
tcacaggaagctgtcatccaggagctgctgttccgcctcaccactgtctacatcgatcgc
gtcacacgccgagacggccgcggattcaaaccgctcaagagcgcagacgacctgattaac
tggtgttcccactacggcgtgttgcatccctgggtcagcatcctgactccagctcacgtc
aacatcattacagaggacctccacaaactacagtccctgctgtgcggtcccaccctggac
gcgtcatccatcctgcccctgttggagcagctgccagacggggacaacgccgggctcagt
gtgcacgtgctctgtgccaccaagctgggtcactacgagagctccatcgagaggttgcta
gaccgctgtcctcaggccatcatcccttatgctaatcatgagctgcagaacaacaacatg
gctctgtggtggcagaagctgttccctgagctgtgtgagagaaccagggcaacacaggga
gagaacaccatcctgctggctgcactcaaagaaacgctggtggtggttgccatggagctg
aaccccctggagttcctggacctgttgcctgacgacgggacggtccacttcttcctgcct
cacctgctggagtgcagccagagacacctcatgatgtga
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