Salmo salar (Atlantic salmon): 106560663
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Entry
106560663 CDS
T04363
Symbol
sec16a
Name
(RefSeq) SEC16 homolog A, endoplasmic reticulum export factor
KO
K20353
COPII coat assembly protein SEC16
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106560663 (sec16a)
Membrane trafficking [BR:
sasa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
106560663 (sec16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
106560663
NCBI-ProteinID:
XP_013979230
UniProt:
A0A1S3KKU1
LinkDB
All DBs
Position
ssa01:complement(106124957..106228733)
Genome browser
AA seq
2362 aa
AA seq
DB search
MQPPPRTGPPGASGPPPAGVGPNAFRRTRPHKHTGAAVMAGLPAQPMTDPFAFGRQAPPP
MATGGHPPPPNSSPLPLQAPPPGMYHQAGMGQGLHQPQPLDSAQAGAVPLGPPPPSTPGV
SVLTHHGTASPVPFPGQLPGPPGHAPPSAEQGYFNSREPAPLMTPAPMSGQAPYGQDHGG
DHHPQGMPFKPVPPVLSQWVPDHGSRPPSVQNYFQPTSDPLPQVYNAAPQSQISPHTPLP
HSTPPTHPQQQHQPQPPSQHPDRPTSSQWPDLAGANTPQQHNAHFQAQTYFSQSSATLDS
WFSQHPQDLVYHQMGAGPGLARPDSARSHYRHDSAGSHHGSHYGSYHASTPGPAPVPFIP
DGTISMFFKGNDVENEETLAGEGARAVNGLQNFQPSHNHQQMSSPQPQANPVAGAEATHS
YRGLPPQAGQSLTYMNDGNFPGAGKPVQEKPAEAQFDHVENLECVPNQEVLPSEPQSSPA
AAAAHGGDCYEAGPNLETPDSVPRPIRSASVSSSYSNLSHGSGTGTVPRRHQGVVGTFIQ
QESPRPSEDAFSSAAAGGYFEQIDTSPAGDMAAAYQSIPERMCHSQPHTPSPPKPTGIFQ
ASANSSFEPVRSHSVAVRPAEVDRARMVAERGSDSLPGNLEHPPDNLENIYGAGTGHTQA
GDGAGAPPLAYPLSHSHSRPSSRAHVAHRPCESPATTLWAQHDPASLGTNILLVPAAPPI
LAPLRKPSAEVIQPPENGSLDLQPPQHAPPPSQHPSENLENPPKVSEGDTSDSQANLGYA
SLLVSESLHQPVLIAPPTSNYSMIPPSNPVRPPSQAQGASAAQSGPPLSSNQNPLFAPTP
MSSSSQSPLNLLRDDREGVKPEITPPPSQSQPARSPLSKVQSMCGNYHSSLPVHFQAPLP
AAANYNQLSNYELLDFSMHQSHIPNQAAGLPPLSLQQGPPLASNAPGFYLQVTKDAQQVG
RGNGDTSTAQIPAEPMPPPVAPNTQQPPSEPPMVPQPQPGHQGQGEDPAAPLSGAPPPQG
QFPPPMQGPATGNAPAPSVAYPGPRGHVPLANPPPPGTGVPPAQPAPTDPPRPPSSLGSQ
LGYGPPPPGQVYGGYYGGAYPEYPDGRASYLPAQYPPAPVDPRAQQYYQDDPYMTADPRY
GRYEGANPAYPQYREPQPERPSSRTSQYSDRPSSRQGFPPEDYQRANRSAYDDYYAEYYK
NQYGDRSRWEGYNASAGTYDPRYRDYYDQNYWYNYNPEAYRGREAAYYNQQPTQQYPAAT
ARPQGYDDKWRYYPGYDATFDDDYRRQRDEYRDDFDRRSVHSEQSAHSLHSSQSHRSRRS
SFSSRSQQSEVYRSQPDLTAVYDPTVSTLPVDYSYGQYPEQTDPGQSFSQYPYTSGYQAD
DSTWVVAEQPPPRPVTPEKYSVSHRCARFGPGGQLIQVLPNLPSAGQPALVEIHNMEMML
QDTPDQSELRSFPGPLLKEETHKVDVIKFSQNKGLECARNNDLLDKDSAALLWDFIVLLC
RQNGTVVGTDIADLLLKEHRSVWLPGKSPNEANLIDFNNEPLARAEEEPGTGPLSLLSDT
FMTVPENVGKETERFRELLLFGRKKDALEAAMKGALWGHALLLASKMDSRTHARVMTRFA
NSLPINDPLQTVYQLMSGRMPASATCCGDEKWGDWRPHLAMVLSNLTHTLDLDTRTITTM
GDTLASKGLTDAAHFCYLMAQVGLGVFTKKSTKMVLIGSNHSLSFFQFASNEAIQRTEAY
EYAQSLGSQPCSLPNFQVFKLIYACRLAEAGLCAQAFHYCEVISRSVLMQPSYHSPVFTS
QLIQMSEKMRFFDPQLKEKADQELFNEPEWLINLRQLDGQMRTGVIAYNADRATPQQYDC
STPNSELDQTSPPEPYAQPLDMVGHTSDNPLMTSLMPGPPQQGVQLMPPAPPTILQDGMV
SQPPHPNEGVQFYPVPPSLPGPPGQIPLSGFHPQGSGFVQPYQPQQPQPDKKDMFPGAQH
QQMAPPQHQQQMMPPQIQQPQKMPSDDYQPTGPLELQPPPMSTSPQRNTFTPQMDFYDQM
AHMGPGRRSRTTSQSSMHMQPPGRRSRTMSESSTHSGGRERSNSAAKQSSPPPLSIPEQA
KKDSPKKGGGGGGWLNWLYRKGKNEAHLPDDKNKSIVWDEKKQKWVNLDEPEEEYKPPPP
PPSGFPKMLGPIPGQGGPGGPPTGGPPVNMFSRRAGTKSRYVDVLNPGGPRVKPGGSAPA
PSDFFAPLAPMPMPANLFVPGAEEQQPMEGNVPETGGNQEQSDPNPSAVPQMFNPTLLPP
GPVGPPIASGSPSGELSRSSSMSSLSLELSHHINQVPPTPQGAPPSGGVTFYNPAQFAQA
STPSGRLLSGRLGGQRAYPVLK
NT seq
7089 nt
NT seq
+upstream
nt +downstream
nt
atgcagccccctcctcggaccggcccccctggtgcatccggcccccctcctgccggcgtt
gggcccaatgccttccggaggacaaggccccacaagcatacaggagcagcggtcatggcg
ggactacctgcccagcccatgacagaccccttcgcatttggcaggcaagcccctcctcct
atggctacaggtggtcacccgccgccacccaatagcagccctctgcctttgcaggccccg
cctcccggtatgtaccaccaggctggcatgggtcaggggctgcaccaaccacaaccactg
gatagtgcacaggctggggctgtgccccttggcccaccaccgccctctaccccaggggta
agcgtcttaacccatcacggtactgcgtcccctgtccctttccctggacagctacctggc
ccgccaggccatgcaccgccaagtgcagagcagggctattttaactctagggagccagca
cccttgatgaccccagcccctatgtctggccaagcgccttatggccaggaccacggagga
gaccatcaccctcaggggatgccctttaagcctgtgcctcccgttttgtctcagtgggtg
cccgaccatgggagccgccccccgtcggttcagaactatttccaacccactagtgatcct
ctaccccaggtttataatgctgctccccagtcccagatatctccacacacacccttgccc
cacagcacccctccaacacacccccagcagcaacaccagccccaaccaccttctcagcac
ccagacaggccaactagctcccagtggcccgacctggcaggtgcgaacacaccccagcaa
cacaacgcccattttcaggctcagacctacttcagccagagctcagccaccctggactca
tggttcagccagcacccccaggacctggtctaccaccagatgggagctggccctggactg
gctcggcccgattcagccagatctcactatcggcacgactcggccgggtctcaccatgga
tcccactatggatcttaccatgcatcaactcctggcccagcgccggtccccttcatccca
gatggcaccatctccatgtttttcaaaggaaatgacgtggagaatgaggagaccctcgcc
ggagagggagccagagcagtgaatgggctccagaacttccagccctcccataatcaccag
cagatgtcatcccctcaaccccaagccaacccagtggcgggtgcagaggccacccacagt
taccgtgggctcccaccacaagctggccaatcattaacctacatgaacgatggtaacttt
cctggagctggcaaacccgtccaggagaaacctgctgaggcccagtttgaccacgtggag
aacctggagtgtgtgcccaaccaggaggtcctacccagcgagccccagagcagccctgct
gcagcagccgcccacgggggagattgctacgaggcaggccccaacctggagacccccgac
tctgtcccccggcccatacgttctgccagcgtgtcctctagctacagcaacttgagccac
ggcagcggcactggtacagttccacgccgacaccaaggagtggtgggcaccttcatccag
caggagagccctcggccctcagaggacgcattctcttcagccgctgccggaggctacttt
gagcagattgacacctctccggccggggatatggccgctgcttaccagagcatcccggag
agaatgtgccacagccaaccccatacgcccagtcctcccaaacccaccggcattttccag
gctagtgccaactcctcctttgagcctgtgcgctcacacagtgtcgcagtgcgcccggcg
gaggtggaccgtgcccggatggtggcggagaggggctctgactctctgcctgggaacctg
gagcatcctccagacaaccttgagaatatctacggagcaggtacagggcacactcaagct
ggggatggagctggggcacctcctcttgcatacccactgagtcactcccactccaggccc
tcgtcccgggctcatgtggcccaccggccctgtgagagccctgccaccaccctgtgggcc
caacatgaccccgctagcctgggaaccaacatcctgctggtccccgctgcccctccgatc
cttgccccactgcgaaagcccagtgctgaggtcatccaaccccccgagaatggctccctg
gaccttcagccccctcaacacgcccctccgccctcccagcatccctcggagaacctggag
aaccctcctaaggtgagtgagggggacacgtctgactcgcaggccaatctgggctatgcc
tctctcctggtgtctgaatcgctccaccagcccgtgttgattgccccacccacctccaat
tacagcatgattcctcccagtaaccctgtgaggccgccctcgcaggctcaaggggccagt
gccgcacagtccggtcctcccttgagctccaatcagaacccattatttgcccctacacca
atgagctcctccagtcagagccccctcaatcttcttcgggatgacagggaaggggttaaa
ccagagatcacgcccccaccatcccagtcccagcctgctcgctcccctctctcaaaggtc
caatcaatgtgcggaaactaccattcttctctacctgttcattttcaggctcctcttcct
gctgccgccaattataatcagctctcaaattacgagctgcttgatttttctatgcaccaa
tctcatatcccaaaccaagccgcagggctgccacctctctccctccagcagggcccgccc
ctggcgagtaacgctcctgggttttacctgcaggtcaccaaagatgctcagcaggtgggt
agaggcaatggggacacctccacagcacagatacctgccgaacccatgccccccccagtg
gccccaaacacccaacaaccaccctctgagccacccatggtaccccagccccagcctggg
caccaaggccaaggagaggaccctgcagcccctctcagtggagcaccaccaccgcaaggg
cagttcccacccccaatgcagggtcctgccacggggaatgcacccgccccctctgtggct
taccctggacctcggggacatgtgcctctagccaacccccctccaccaggaaccggggtt
cctccagcccagccagcccctacagacccaccgcgacctccctcgtctctgggaagccag
ctggggtacggcccacctcctccagggcaagtgtatgggggatactacggaggtgcctac
ccggagtacccagatggcagagcctcatatcttcctgctcagtacccacccgcacctgtg
gaccccagagcacagcagtattatcaggatgacccatacatgacagcagaccctcgctat
ggcagatatgaaggagccaacccggcctacccccaatacagagagccccagccagagaga
cccagctccagaaccagccagtactcagacagaccctcctccaggcaaggtttccccccc
gaagactatcagagagctaaccgaagtgcttatgatgactactatgcagagtattacaaa
aaccagtacggagaccggagcaggtgggagggctacaatgcttcagcaggcacttatgac
ccccgctacagagactactacgaccagaactactggtacaactacaaccctgaggcctac
cggggaagggaggcagcctactacaaccagcagcccacccagcagtaccctgccgctact
gccaggccacagggctatgacgacaagtggcgctactatcctggttacgatgccactttt
gacgatgactaccggcggcagagggatgagtacagggacgattttgaccgacggagcgtc
cacagcgaacagtcggcccacagtctacacagctcccaaagccatcgcagccgacgcagc
agctttagctcccgctcacaacagagcgaggtgtacaggtcccagcctgacctgacagcg
gtttacgaccccactgtttctaccctgcctgtggactactcctatggacaatacccagag
cagacggatcccggacagagcttcagccagtacccctacacatcgggctaccaggcagat
gacagcacctgggtcgtcgctgagcagcctcctcctcgtcccgttactccagagaagtac
tcggtatcccaccgctgtgcccgcttcgggccaggtggtcagctgatccaggtcctgccc
aacctcccctcggccggccagcctgctctagtggagatccacaacatggagatgatgctg
caggacacaccagaccaatctgagctgcgctccttccccggaccgcttttgaaggaggag
actcacaaggtcgacgtgataaagttctcccagaacaaaggcctggagtgtgcccgcaac
aatgaccttctggacaaggactcggctgccctcctctgggacttcatcgtgctgctgtgt
aggcagaacgggaccgtggttgggacagacatagctgatctgttgctgaaggagcatcgc
tcagtgtggttgccgggcaagtcacctaacgaggccaacctgattgacttcaacaacgag
ccactggcgcgggccgaggaggagcctgggacgggaccactgtccctcctatcagacacc
ttcatgactgtccccgagaacgtaggcaaggaaacggagcgcttcagggaactgctgcta
tttggtcgcaagaaggatgccctggaggcagccatgaagggagctctgtggggccacgcc
ctgctgctggccagtaagatggacagccggacacatgctcgcgtcatgaccaggtttgcg
aacagtctgcccatcaacgaccctctgcagacagtgtaccaactgatgtctgggaggatg
cccgcctcagccacttgctgtggggatgagaagtggggcgactggcgcccccatctggcc
atggtgctgtccaacctgacccacactttggacctggacacacgtaccatcaccaccatg
ggagacactctggcttccaaggggctaaccgatgcggcccacttctgttacctgatggcc
caggttggtttgggggtgttcaccaaaaagagcaccaaaatggttctaatcggctcaaac
cacagtctatcgttcttccagtttgcgtctaacgaagcgatccagaggacggaggcctat
gagtatgcccagtctctgggctcccagccttgctccctgcccaacttccaggtgttcaag
ctgatctatgcgtgtcgcctggccgaggccggcctgtgtgctcaggccttccattactgt
gaggttatctccaggagcgtgctcatgcagccgtcctaccactctcctgtgttcaccagt
cagctgatacagatgtctgagaagatgcgattcttcgatccacaactgaaggagaaggcg
gatcaggagctcttcaacgagccagagtggctgattaatctgagacagctggatggacag
atgaggactggagtgattgcatacaatgcagacagggctactcctcaacagtatgactgc
agcacccccaattctgagttagaccagaccagcccgcctgagccatatgcccagcctctg
gacatggttggccacacctctgacaaccctctgatgacatcactcatgcccggaccgcct
cagcaaggggtgcagctgatgcctccagctcccccaactatcctccaggacggaatggtc
tcccagccgccacaccccaacgagggggtccagttctacccagtaccccccagtctccct
ggaccacctggccagatccccttatcagggttccatccccaaggctctggctttgtgcaa
ccttaccaaccccagcagccccaaccggataaaaaggacatgtttcctggagcccagcac
cagcagatggcgccaccacagcatcagcaacagatgatgcccccgcaaatacagcagcca
caaaagatgccctctgacgattatcagccgacgggtccactggaactacagcctcctccc
atgtccacctctccacagaggaacaccttcacgcctcagatggacttctatgaccaaatg
gctcacatgggcccaggaagaagatccaggactacttcacagtcctcaatgcacatgcag
cctccaggtcgccgctcccgcaccatgtcggaatcttccacacactccggaggacgagag
aggagcaactcggcagccaagcagtcctctccgcctccactctccatccctgagcaggcc
aagaaggactcgcctaaaaagggaggggggggtggtggttggctcaactggctctatagg
aaggggaagaatgaagcccaccttccggatgacaagaacaaatctattgtctgggacgag
aagaaacagaaatgggtcaacttggatgagccagaggaggagtacaagccccctcctcct
cctccctcgggcttccctaagatgctgggacccataccgggacaagggggtcctgggggt
ccccctactggtgggccgcctgtcaacatgttctccaggagagcaggtacaaagagccgc
tacgtggatgtcctgaacccaggtggaccccgtgtcaagcctggtggatcggcacctgcc
ccgtcagacttctttgccccgttggctcccatgcccatgccagccaacctgtttgtgccc
ggagcagaggagcagcagcccatggagggtaatgtcccagagacaggagggaaccaggaa
cagagcgaccctaaccccagtgctgtgccacagatgttcaacccaacattgttaccgccc
ggtccagtggggccccctattgcctctgggtcaccgtcaggagagctgtcgcgttctagc
tcaatgagttctttatcacttgaattgagtcaccatataaaccaggtgcccccgactccc
cagggagctccaccctctggaggtgtgacgttctataaccccgcccagtttgcacaggcg
agtactccatcgggacggcttctgtctgggaggttgggcggtcagagggcatacccagtg
ctgaagtag
DBGET
integrated database retrieval system
