Salmo salar (Atlantic salmon): 106560681
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Entry
106560681 CDS
T04363
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106560681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sasa03021
]
106560681
03036 Chromosome and associated proteins [BR:
sasa03036
]
106560681
Transcription machinery [BR:
sasa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
106560681
Coactivators
SAGA/TFTC/STAGA complex
106560681
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
106560681
STAGA complex
106560681
TFTC complex
106560681
SAGA complex
106560681
SLIK complex
106560681
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CENP-S
CBFD_NFYB_HMF
Bromo_TP
Motif
Other DBs
NCBI-GeneID:
106560681
NCBI-ProteinID:
XP_013979262
UniProt:
A0A1S3KKY2
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All DBs
Position
ssa10:complement(53058969..53069804)
Genome browser
AA seq
639 aa
AA seq
DB search
MAEERRPKQCTVVLPTESMKAMAESIGVGQLQEESCAALSEEVSYRIKEIAQDALKFMHH
GKRRKLTTSDIDHALKLKNVEPLYGFQSQEFIPFRFASGGGRELHFYEEKEVDLSDIINT
PLPRVPLDVSLKAHWLSIEGVQPAIPENPPPAPKEQQKAESTEPLKVVKPGQEEEGSIQK
GQGATSAEAKGKKEGLMRMKPRSTHELSVEQQLYYKEITEACVGSCEAKRAEALQSIATD
PGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAVV
TCIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTKSWLDEKTQ
WTTRYGCIAGLSELGPDVIKTLILPRLTIEGARIKAVSEGPVVSNIDKIGADHVQSLLLK
HCASVIAKTRPLPDNMEQYRADYGYLGPMLCSHVVKARAQAALQAQQVNRTTLTITQPRP
TLTVSQSGIGGSGGSRSPSIIKVPSSLTLMSTRPGTPTQPSPPATKYIVMATSAGASSTQ
QVITLSSSSGSSVTSTVASATSTLQPLVKLESRGAGGLGGSRPLQKYIVVSLPTSASSSL
ESKSGMLPPSSSSTSPISLEAGMKMDRSDSPGASTQSPH
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagcggaggccgaagcagtgcactgtggttttgcccactgagtccatgaag
gccatggcagagtccataggagtggggcagctacaggaggagagctgtgctgccctgagc
gaggaggtcagctacagaataaaggagatcgcccaggacgcgttgaagtttatgcaccac
ggaaagagacgtaaactgacaaccagcgacatagatcatgctcttaaactgaagaatgta
gagcctctgtatgggttccagtcgcaagagttcatcccgttccgctttgccagcggagga
gggagagagcttcacttctacgaggaaaaggaggtggaccttagtgacatcatcaacaca
cccctccctagagtcccacttgatgtttcactcaaagctcattggttaagtattgaaggt
gtccagcctgctataccagaaaacccacccccagcccccaaagagcagcagaaggctgag
tctacagagcccctcaaggtggtcaagcctggtcaggaggaggaaggctccatccagaag
ggccagggagctacatctgcagaggctaaaggtaagaaggagggtctgatgaggatgaag
ccccgcagtactcacgagctctcagtggaacagcagctctactacaaggagatcacagag
gcctgcgtcgggtcctgtgaggccaagagagctgaggctctacagagtattgctacagac
cctgggctctaccagatgctccccagattcagcacttttatctctgagggggtccgtgtg
aacgtggtgcagaacaacctggccctgctcatctacctgatgaggatggtcaaggccctc
atggacaaccccaccctctacctagagaaatatctgcatgagttgatcccagcggtggtg
acgtgtatagtgagtaagcagctgtgtttgcggcctgacgtggacaaccactgggctctg
agggacttcgctgcccgtctgatggcccagagctgtaagaccttcagcaccaccaccaac
aacatccagtcacgcatcaccaagaccttcaccaagagctggttggatgagaagacccag
tggacgacacggtatggctgcatcgctggactgtctgaactaggacctgacgtgatcaag
acgttgatcctgcccaggctcactatagaaggagctcgtatcaaagctgtgtctgaggga
cccgtggtctccaacatcgataagataggagcagaccacgtccaaagccttttactgaaa
cactgtgccagcgttattgccaagactcgtcccctgcctgacaacatggagcagtaccgg
gcagactacggttacctggggcccatgctctgttcccacgtggttaaggcccgggcccag
gcagcactacaggcccagcaagtcaacagaactacactcaccatcacacagcctcggccc
accctaacggtgtctcagagcgggataggagggtcgggggggtcccgttcccccagcatc
atcaaggttcccagctccctcaccctcatgtccacccgaccaggcaccccaacacagcca
tcgccccctgcaaccaagtacatcgtcatggcaaccagtgcaggggcatcttccacccag
caggtgatcaccctgagttcctcctcgggatcctcggtgaccagcacggttgccagcgct
acctccaccctgcagcctctggtcaagctggagtccagaggggctggcggcctggggggg
tcgcgacccctccagaagtacattgtggtgtctctccccacgtccgcctcttcctccctg
gagagtaagagtggcatgctccctccctcctcttcctccacctctcccatctcgctggag
gccgggatgaagatggatcgctcagactctcccggggccagcacacagtccccgcactaa
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