Salmo salar (Atlantic salmon): 106560681
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Entry
106560681 CDS
T04363
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106560681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sasa03021
]
106560681
03036 Chromosome and associated proteins [BR:
sasa03036
]
106560681
Transcription machinery [BR:
sasa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
106560681
Coactivators
SAGA/TFTC/STAGA complex
106560681
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
106560681
STAGA complex
106560681
TFTC complex
106560681
SAGA complex
106560681
SLIK complex
106560681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CENP-S
CBFD_NFYB_HMF
Bromo_TP
Motif
Other DBs
NCBI-GeneID:
106560681
NCBI-ProteinID:
XP_013979262
UniProt:
A0A1S3KKY2
LinkDB
All DBs
Position
ssa10:complement(53058969..53069804)
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AA seq
639 aa
AA seq
DB search
MAEERRPKQCTVVLPTESMKAMAESIGVGQLQEESCAALSEEVSYRIKEIAQDALKFMHH
GKRRKLTTSDIDHALKLKNVEPLYGFQSQEFIPFRFASGGGRELHFYEEKEVDLSDIINT
PLPRVPLDVSLKAHWLSIEGVQPAIPENPPPAPKEQQKAESTEPLKVVKPGQEEEGSIQK
GQGATSAEAKGKKEGLMRMKPRSTHELSVEQQLYYKEITEACVGSCEAKRAEALQSIATD
PGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAVV
TCIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTKSWLDEKTQ
WTTRYGCIAGLSELGPDVIKTLILPRLTIEGARIKAVSEGPVVSNIDKIGADHVQSLLLK
HCASVIAKTRPLPDNMEQYRADYGYLGPMLCSHVVKARAQAALQAQQVNRTTLTITQPRP
TLTVSQSGIGGSGGSRSPSIIKVPSSLTLMSTRPGTPTQPSPPATKYIVMATSAGASSTQ
QVITLSSSSGSSVTSTVASATSTLQPLVKLESRGAGGLGGSRPLQKYIVVSLPTSASSSL
ESKSGMLPPSSSSTSPISLEAGMKMDRSDSPGASTQSPH
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagcggaggccgaagcagtgcactgtggttttgcccactgagtccatgaag
gccatggcagagtccataggagtggggcagctacaggaggagagctgtgctgccctgagc
gaggaggtcagctacagaataaaggagatcgcccaggacgcgttgaagtttatgcaccac
ggaaagagacgtaaactgacaaccagcgacatagatcatgctcttaaactgaagaatgta
gagcctctgtatgggttccagtcgcaagagttcatcccgttccgctttgccagcggagga
gggagagagcttcacttctacgaggaaaaggaggtggaccttagtgacatcatcaacaca
cccctccctagagtcccacttgatgtttcactcaaagctcattggttaagtattgaaggt
gtccagcctgctataccagaaaacccacccccagcccccaaagagcagcagaaggctgag
tctacagagcccctcaaggtggtcaagcctggtcaggaggaggaaggctccatccagaag
ggccagggagctacatctgcagaggctaaaggtaagaaggagggtctgatgaggatgaag
ccccgcagtactcacgagctctcagtggaacagcagctctactacaaggagatcacagag
gcctgcgtcgggtcctgtgaggccaagagagctgaggctctacagagtattgctacagac
cctgggctctaccagatgctccccagattcagcacttttatctctgagggggtccgtgtg
aacgtggtgcagaacaacctggccctgctcatctacctgatgaggatggtcaaggccctc
atggacaaccccaccctctacctagagaaatatctgcatgagttgatcccagcggtggtg
acgtgtatagtgagtaagcagctgtgtttgcggcctgacgtggacaaccactgggctctg
agggacttcgctgcccgtctgatggcccagagctgtaagaccttcagcaccaccaccaac
aacatccagtcacgcatcaccaagaccttcaccaagagctggttggatgagaagacccag
tggacgacacggtatggctgcatcgctggactgtctgaactaggacctgacgtgatcaag
acgttgatcctgcccaggctcactatagaaggagctcgtatcaaagctgtgtctgaggga
cccgtggtctccaacatcgataagataggagcagaccacgtccaaagccttttactgaaa
cactgtgccagcgttattgccaagactcgtcccctgcctgacaacatggagcagtaccgg
gcagactacggttacctggggcccatgctctgttcccacgtggttaaggcccgggcccag
gcagcactacaggcccagcaagtcaacagaactacactcaccatcacacagcctcggccc
accctaacggtgtctcagagcgggataggagggtcgggggggtcccgttcccccagcatc
atcaaggttcccagctccctcaccctcatgtccacccgaccaggcaccccaacacagcca
tcgccccctgcaaccaagtacatcgtcatggcaaccagtgcaggggcatcttccacccag
caggtgatcaccctgagttcctcctcgggatcctcggtgaccagcacggttgccagcgct
acctccaccctgcagcctctggtcaagctggagtccagaggggctggcggcctggggggg
tcgcgacccctccagaagtacattgtggtgtctctccccacgtccgcctcttcctccctg
gagagtaagagtggcatgctccctccctcctcttcctccacctctcccatctcgctggag
gccgggatgaagatggatcgctcagactctcccggggccagcacacagtccccgcactaa
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