Salmo salar (Atlantic salmon): 106560791
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Entry
106560791 CDS
T04363
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106560791
Membrane trafficking [BR:
sasa04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
106560791
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_9
LRRNT
LRR_EndoS
LRR_Zer-1
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
106560791
NCBI-ProteinID:
XP_013979537
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Position
ssa10:complement(61008456..61371474)
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AA seq
615 aa
AA seq
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MGAREASGHSYLVACWQPILILMLGTVLSGSTTGCPSRCECNAQERSVICHRKKLMSVPE
GIPTETRLLDLSKNRIKTINMDEFAAYPNLEELELNENTISAIEPGAFNNLYGLRTLGLR
SNKLKLIQLGVFTGLSNLTQLDISENKIVILLDYMFQDLYNLRSMEVGDNDLVFISHRAF
HGLSSLEQLTLEKCNLTSVPTEAFTHLHSLIFLRLRHLNIYVIKDYSFKRLYRLKVLEIA
NWPYLDTMTSNCLYGLNLTSLTITNGNLTSIPYVALRHLVYLRFLNLSYNPIHTIEGNKL
HDLLRLQEFHLVGGRLAMIEPYSFRGLNYLKIFNVSGNALSTLEESAFHSVGNLETLALY
DNPLACDCRLLWVFRRRWRLNFNRQQPTCASPEFVQGKEFKDFPDVLQPNYFTCRKSRIR
DRKAQQKFVDEGTTVHFVCQADGDPAPVIMWLSPQKQFITTKTIGRLTVFPDGTLEVRYA
QIQDNGTYVCIASNAGGNDTSLAHLHVHSYSPDWPHQPNKTFAFISNQPNENGANGTRTN
VPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGATKHNIEIEYVPRKSDAGMS
SSNADAPRKFNMKMI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgggggccagggaagcgagtgggcacagctacctggtggcttgctggcagcccattctg
attctgatgctgggcaccgtactgtccggttccaccacaggctgcccgtcccgctgcgag
tgcaatgcccaggagcgctcggtcatatgccaccgcaagaagcttatgtccgtccctgag
ggcatccccacagaaacgcggctactggacctcagcaagaaccgcatcaagaccatcaac
atggacgagttcgcagcctaccccaacctggaggagctggagctcaacgaaaacactatc
tcggccatcgagcccggcgccttcaacaacctgtacggcctccggacattggggctgcgc
agcaacaagctcaaactcatccagctgggtgtgttcacgggcctcagcaacctcacccag
ttggacatcagtgagaacaagatagtcatcctgctggactatatgttccaagacctgtac
aacctgcgctccatggaggtgggcgacaatgacttggtgttcatctcccaccgggccttc
catggtctcagcagcctggagcagctgactttggagaagtgcaacctgacctcggtgccc
accgaggccttcacccacctccacagtttgatctttctcaggctgcgccacctcaacatc
tacgttattaaggattactccttcaaaagactgtaccggctgaaagtgctggagatagcc
aactggccctacctggacaccatgacctccaattgcctctatggactgaacctcacctcg
ctgaccatcaccaatggcaacctgacctctatcccatacgtggctctccggcacttggtc
tacctacggtttctgaatctgtcctataaccccatccacaccattgaggggaataagctc
catgaccttctgaggctccaggagtttcacctggttgggggcaggctggctatgatcgaa
ccctactcgttccgaggcctaaactatctgaagatattcaatgtgtctggcaatgccttg
agcaccttggaggagtctgcgttccactcggtaggcaacctggagactctggcgctttac
gataaccccttggcatgtgactgccggctgctgtgggtgttccggagacgctggaggctc
aacttcaaccggcagcaacccacctgcgcttcacccgagttcgtacagggaaaagagttt
aaagatttcccggacgtcctgcagcccaactacttcacgtgtcgcaagtccaggatccgg
gaccgcaaggcgcagcagaaatttgtggacgagggaactactgttcattttgtatgccag
gcggacggtgatcccgccccagtcatcatgtggctctcaccccagaagcagttcatcacg
accaaaaccatcgggcggctcacagtattccccgatggcacccttgaggtgcgctacgca
cagattcaggataatggcacgtatgtgtgtatagccagcaacgccggtggcaacgacaca
tctctcgcccacctgcatgtccatagctactcaccagactggcctcaccaacccaacaag
acctttgccttcatctccaaccagcccaatgagaatggtgccaatgggacgcgaaccaac
gtccctttcccctttgacataaagaccttaatcatcgccaccaccatgggtttcatatct
ttccttggtgtcgtcctgttttgtctggtgctactctttctgtggagtagaggtaaaggg
gccacaaagcacaacatagagattgagtatgtgccacgcaagtcagacgctgggatgagc
agcagcaatgcagacgcccctcgcaagtttaacatgaaaatgatttaa
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