Salmo salar (Atlantic salmon): 106560835
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Entry
106560835 CDS
T04363
Name
(RefSeq) transcriptional repressor CTCF-like
KO
K23195
transcriptional repressor CTCF
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106560835
03036 Chromosome and associated proteins [BR:
sasa03036
]
106560835
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106560835
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
106560835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_7th_ZNF462
zf-C2H2_REST
zf-met
Zf-C2H2_ZNF451
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451_C
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
106560835
NCBI-ProteinID:
XP_013979664
UniProt:
A0A1S3KMV7
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All DBs
Position
ssa10:complement(79969071..79989430)
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AA seq
801 aa
AA seq
DB search
MKYSFLVQVLPMDGGPTDVVVEAKDFITYEGEEVVADLLQQAAEGVMDQQPEGVAGLDTQ
QLVEGVNVEMMVMDSLDPALLQMKTEVMDAPVATAHEATVTTVDETQIITLQVVNMDEQQ
LGGLGELQLVQVPVSAVPVTQATVEALQGTFVDTTAMPKDGNPVICHTLPLPEGFQVVKV
GANGEVETVEQDELQHQEEQQVHPEEEELHCEPEPEEPQWAKDPDYQPPAKKTIKKAKKS
KLRYNTEGDKDNMDVSVYDFEEEQQEGMLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQC
ELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCQDCD
MAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYAS
RDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIAR
KSDLGVHLRKQHSFIEQGRKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYCCRQER
HMLMHRRTHTGEKPYACSQCEKTFRQKQLLDMHFRRYHDPNFVPTAFVCTKCGKAFTRRN
TMARHAENCNGDPSEGENGSPPKRGRGGRKRKMRSRKDDDDDDDDDDDDSEDNADPELDD
IDEEDEEAEAALLEEEEEEEMELEQAPPTKPIPAPVEPPVKRKRGRPPKNIPKPSPPAKA
SKAAPKGKAAAAAAIIQVEDENTGAIENIIVKKEPEVEQAAPEVVVEQPEEAGVETVELP
VADTAPNGDLTPEMILSMMDR
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgaagtattcctttctagtgcaggtgttaccgatggacggaggaccaacagatgttgtg
gttgaggccaaggacttcatcacctatgagggggaggaggtggtggcagacctgctccag
caagcagcagagggggtgatggaccagcagccagagggagttgctggtctggatacccag
cagctggtggagggagtcaatgtggagatgatggtaatggactccctggacccggccctg
cttcagatgaagactgaggtgatggacgcccctgtggctacagcccacgaggccacggtc
accacggtggatgagacccagatcatcacactgcaggttgtcaacatggatgagcagcag
ctgggaggcctcggggagctacagctggtccaggtccctgtctctgctgtccctgtcacc
caggccactgtagaggcgctacagggcaccttcgtggacaccacggccatgcccaaagac
ggaaaccctgttatctgccacaccctgcccctgccagagggatttcaggtggtgaaggtt
ggtgcgaatggtgaggtggaaacagtggagcaggatgagctccagcaccaggaggagcag
caggtccatcctgaggaggaggagctgcactgcgagcccgagcctgaagaaccacaatgg
gccaaggaccccgactaccagcccccagccaagaagaccatcaagaaggcaaaaaagagc
aagctgcgctacaacacagagggggataaagacaacatggacgtgtctgtgtacgatttt
gaggaggagcagcaggaagggatgctctctgaggtcaatgcagagaaggtggtgggcaac
atgaaaccccccaaacctaccaaaattaagaagaagggtgtgaagaaaacattccagtgt
gagctgtgtagctacacctgtccccgccgctccaacctggaccgacacatgaaaagccac
acagatgagaggccccacaagtgccatctgtgtggaagggccttcaggaccgttaccctg
ctgaggaaccacctcaacacacacacaggtaccagaccacacaagtgtcaagattgtgac
atggccttcgtgaccagtggagagctggtccgacatcgtcgctacaagcacacacatgag
aaacccttcaagtgctccatgtgtgactatgccagtgtagaggtgagcaagttaaagcgg
cacatccgttcccacactggggagcgtccgttccagtgcagtttgtgcagctatgccagc
agagacacctacaagctgaagagacacatgaggacacactcgggagagaagccgtacgag
tgctacatctgccacgcccgtttcacccagagtggaaccatgaagatgcacatcctgcag
aagcacacagagaacgtggccaagttccactgcccccactgtgacacggttatcgcccga
aagagtgacctgggcgtccacctgcgaaaacagcactcgttcattgagcagggcaggaaa
tgtcgttactgtgatgctgtgttccacgagcgctacgcactcatccagcaccagaagtcc
cacaagaacgagaaacgcttcaagtgtgaccagtgtgattactgctgcagacaggagcgc
cacatgctgatgcacaggcgcacccatacaggagagaagccttacgcctgtagccagtgt
gagaagaccttccgtcagaagcagctcctggacatgcacttccgccgctaccatgacccc
aactttgtgcctaccgcctttgtgtgcaccaagtgtggcaaggccttcacccgcaggaac
accatggccagacatgcagagaactgtaacggggatcctagtgaaggagagaacggatcc
ccacccaagagaggacgaggtgggaggaagaggaagatgcgctcaaggaaggacgatgac
gatgatgatgatgatgacgatgacgacagtgaggacaatgctgatcctgagctggatgac
attgatgaagaggatgaggaggctgaggcagcattgctggaggaagaggaggaggaggag
atggagttggagcaggctccacccaccaaacctattcctgcccctgtagagccgcctgtc
aagaggaaacgcggcagaccccccaagaacatccccaaaccctccccacccgccaaagcc
agcaaggctgcccccaaaggcaaggctgctgcagctgcagccatcatccaggtggaggat
gagaataccggcgccatagagaacatcatagtgaagaaggagccagaggttgaacaggct
gccccagaggtggtggtggagcagccagaggaggcgggggtggagacggtggagctgcct
gtagcagacactgcccccaacggagacctcacccctgagatgatcctcagcatgatggac
cggtga
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