KEGG   Salmo salar (Atlantic salmon): 106560878
Entry
106560878         CDS       T04363                                 
Name
(RefSeq) protein transport protein Sec31A-like
  KO
K14005  protein transport protein SEC31
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    106560878
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sasa04131]
    106560878
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sasa02044]
    106560878
Membrane trafficking [BR:sasa04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    106560878
Secretion system [BR:sasa02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   106560878
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_RIG_2nd WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WD40_Prp19 WD40 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML EIF3I Beta-prop_EIPR1 TPR_Sec16 Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_2nd MIOS_WD40 Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF4 Beta-prop_WDR11_1st MukF_M
Other DBs
NCBI-GeneID: 106560878
NCBI-ProteinID: XP_013979745
UniProt: A0A1S3KMB4
LinkDB
Position
ssa01:107828149..107841782
AA seq 1056 aa
MRLKEIQRTAHPAWSPAPHHPICLALGTSAQQLDASFNTTAALEIFQVDFADPSLDMKLK
GSLPTSNRLHSLVWVNFGAGEDGLGGRLIGGSDNGMVTVYSPEAIVTSGAEAIIGQSDKH
TGPVRALDFNPFQSNLLASGANDSEIYIWDLNNFSNPMTPGTKSQLCEPPEDISVVSWNR
QVQHILASANPSGKAVVWDLRKNEPIIKISDHSNRMHCSGMLWHPEVATQLVLASEDDRM
PVIQMWDLRFATSPLKVLENHTRGLLSIAWSQADPELLLSSAKDNRILCWNPNTGEVIYE
LPTTNQWCFDIQWCPRNPALLSAASFDGWISIYSVMGGSLEAQQQSRADQISSSFDTMDP
FGTGQVLPPLQVPQPTPQTTLVAPLKKPPKWVRRPVGASFAFGGKLITFESPKAPVQSPQ
AVPVPRQVFVSQVTTETELLQRSRELQAALQSGSLSDYCQAKIHKAPTDSEQDIWRFLLV
NFEDEARVKFLSLLGFSKEDLERKISTCLGKNLQPNGHGVDANDLAEKIQLLSTQRSEES
GDAVDSTKTPGSSSPSDFFSQIPAQPQDKEKISFQIPVSADADGLISQALLVGNFEGAVD
LCLNDGRYAEAILLAISGGQELLQKTQQTYLDKQRNSISMLISSVVTQNWGDIVQSCDLD
NWKEALAALLTYAHPKEFAHLCETLGSRLEGERTEKRCLQACLCYICSGNIEKLVECWAL
QRDCSSPLVLEDLVEKMMVLRKSVERLRNSEVAVQSPILADKLTRYAGLLASQGSLATAL
SYLPDTSDQACIMMMRDRLFHAQGERGAAWGQQPPPFPYNIVRVTGGDPDPTRAPAVPPQ
AQPPAQTTQTPGPYQPPLPVMPVVGQPPLYSVTSQTLLQIALDVTCLSPVCSGFSPIQPF
QPQQQPMSAGLGGPGLSAFPPGPTMPGSSLSGHPLPPFSAPGSLATMPSPRLPPSGFTPT
SLPSGPMPPSYQQPGAPVGMYPPGGSHLHSQGPPAGPPSGPYSPLGPGYPQGGPGAPAVK
SFSAPSVAPPPTGTDHDAIDVLRPKCHPMHDIVHFC
NT seq 3171 nt   +upstreamnt  +downstreamnt
atgaggctgaaagagatccagaggacagctcatccagcatggagtcctgccccccatcac
cctatctgcctggctttaggcacgtcagctcagcagctggatgcgtcattcaacaccact
gccgccttggaaatattccaggtggattttgccgatccttccctggacatgaagctcaag
gggtctctacctacttctaacaggctgcatagtctggtgtgggtaaactttggagcagga
gaagacggtttgggagggagactgattggaggcagtgataatggcatggtaacagtgtat
agcccagaagccattgtaacatcaggggcagaggcaataataggacagtctgacaaacac
actgggcctgtcagagcactagacttcaacccctttcagagtaatctgttggcgtcaggg
gcaaacgattcagagatctatatctgggatctgaacaatttcagcaatccaatgacaccc
gggacaaagtcacagctttgtgagcctcctgaagatatcagtgtagtgtcgtggaacagg
caggtccaacacatcctggcctctgcaaaccccagtgggaaagcagtggtctgggacctg
aggaagaacgagcccatcatcaagattagtgaccacagcaaccggatgcactgttcaggg
atgctctggcaccctgaggtggccacacagttggtcctggcctcagaagatgaccgcatg
ccagtcattcagatgtgggacctgcgctttgccacatcccctctcaaagtcctggagaac
cacacaaggggacttctgtccatagcgtggagccaagcagacccagagctgttgctcagt
agtgctaaagacaacaggattctctgctggaaccccaacactggagaggtgatctatgaa
ttaccaaccaccaaccagtggtgctttgacatccagtggtgtcccaggaacccagcgctg
ctgtcggcggcctcgtttgacgggtggatcagtatttacagcgtgatgggaggaagcctg
gaggcccagcagcagagcagggctgatcagatctcctcgtcctttgacaccatggatccg
tttgggacaggccaggtgctgccccctctgcaagttccccaacccacccctcagaccacc
ctcgtcgctccgctgaagaagccccccaagtgggttcgtaggcccgtaggagcctcattt
gcttttggtgggaagctgatcacctttgagagtcctaaggctccagtccagagcccacag
gccgtccctgtccccaggcaggtgtttgtgagccaagtcaccacggaaacagagctcctc
caacgttccagagagctgcaggctgctctgcaatctggttccttgtcagactactgccag
gccaagatccacaaggcccccacagactctgaacaggacatatggaggtttctcctggtc
aactttgaagatgaagcccgggtcaaattcctgagtcttttgggtttcagcaaagaggat
ttagagagaaagatatccacctgcttggggaagaacctgcagcctaacggacatggagtg
gatgccaacgatctggctgagaagatacagcttctctctactcagaggtcagaagaatcc
ggggatgcggtggactccaccaagactccgggttcatcctccccctctgactttttcagt
cagatcccagcacaaccacaggacaaggagaagatcagcttccaaatccctgtctcagca
gatgcagatggtctgatcagccaggctctgctggtgggaaactttgagggagcggtggat
ctgtgtctgaacgacgggcgttacgctgaggccatcctgctggctatcagtggaggacag
gagctactgcagaagacccagcagacatacctggacaagcagaggaacagcatctctatg
ctgatctcatccgtggtgacccagaactggggagacatcgtgcagagctgtgacttggat
aactggaaggaggctctcgctgctctcctaacctacgctcaccccaaagagtttgctcat
ctgtgtgagaccctggggtcgcgtctggagggtgagaggacagagaaacgctgtctgcag
gcatgtctctgttacatttgctctgggaacattgagaaactagtggaatgctgggccctg
cagagggactgctcatctcccctggttttagaggacctggtagagaagatgatggttctg
cgtaagtctgtggagcgtctgaggaacagcgaggtggctgtacagagtcctatcctggct
gacaagctgactcgctatgctggtctcctagcttcacaaggcagcctggctacagccttg
tcctacctgccagacacctcagaccaggcttgcatcatgatgatgagagaccggctgttc
cacgcccagggagagagaggagcagcatggggtcaacagcccccaccgttcccttacaac
atagtcagggtgacggggggcgaccctgaccccactcgggcccctgctgtccccccccaa
gcacaaccaccagcacagacaacacagacaccggggccctaccagcctcctcttcctgtg
atgccagtggttggccagcctcctctttattctgtcacctcccagacactactccagatt
gctcttgatgtaacatgtctgtctcctgtctgctcagggttctctccaatccagccattc
cagccacaacagcagcccatgtctgcaggactaggtggccctggcctctctgccttccct
ccaggacctactatgccaggctccagcctgtctggacaccccctgcctcccttctctgcc
cctggcagcctcgccaccatgcccagcccaaggctacctccgtcaggcttcacacccacc
tcgctcccttcaggccccatgccacccagctaccagcagcctggggcccccgtcggcatg
tacccaccaggggggtctcaccttcacagccagggcccacctgcaggtcccccctctggt
ccgtattcacccctgggacccgggtacccacaaggaggtcctggagccccggccgtcaag
tccttctctgctccgtcggttgctcctcctcctacaggtactgaccatgatgcaattgat
gtgttgcgtcccaaatgccatcctatgcatgatatagtgcacttctgttga

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