Salmo salar (Atlantic salmon): 106560928
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Entry
106560928 CDS
T04363
Symbol
usb1
Name
(RefSeq) U6 snRNA biogenesis phosphodiesterase 1
KO
K23093
U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
106560928 (usb1)
Spliceosome [BR:
sasa03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
106560928 (usb1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HVSL
Motif
Other DBs
NCBI-GeneID:
106560928
NCBI-ProteinID:
XP_013979863
UniProt:
A0A1S3KMH7
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Position
ssa10:complement(75766859..75773108)
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AA seq
282 aa
AA seq
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MLVSYSSSSEEETEHLRLGGDVTKRKQSWHKDDNSLRKKYKSEERTPNAREDDDSKSRLP
VPGSVLDMFTEEDEDPLTDDSMQHGGRIRSFKHESGNWATYVYFPYIPEEGFLELLDEMT
EVAASHSFSLTHTDEFHLSLSKTVVLRHHWIQPFIQSLRTGLTHSRRFICSAEKLKVYSN
DERTRTFLAMEVSTGQAQLLELVKAVDSTMGEFNLDTFYKNPSFHISLAWCVGDCTEHIR
KECLQELQGLVDSHEDGPFLLRLDCQELRCKAGNKTFSIPLH
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgttagtcagttatagtagcagctctgaagaggagacagaacatttacgattaggaggg
gatgtaacaaaaaggaagcaaagttggcacaaagatgacaactcattgaggaagaagtac
aaatcagaagagcgcacccccaatgcaagggaggacgatgactccaagtcaagactgcct
gttcctggcagtgtgctggacatgttcacagaggaagatgaggacccactgactgacgac
agcatgcaacatggtggacggattcgatcatttaaacacgagagcggaaactgggccact
tacgtgtactttccatacatcccagaggaagggttcttggagctgcttgatgagatgact
gaagtagcagcatcccatagcttctccctcactcatacagatgagtttcacctcagttta
tctaagacagtggttctgaggcatcactggatccagcctttcatacagtccctcagaaca
ggcttgacacatagcaggaggttcatttgttcggctgagaagctgaaggtctactctaat
gatgagagaaccaggacgttcctggctatggaagtctccacaggacaggctcagctacta
gagcttgtgaaagcagtggatagcactatgggggagttcaaccttgacactttttacaag
aatccttccttccatataagtctggcctggtgtgttggtgactgcactgaacacattcgc
aaagagtgtctgcaggagttgcagggtctggttgactcccatgaggatggacccttcctc
ttgagactggactgtcaagagctgcgctgtaaggctgggaacaagaccttttccattcca
ctacactga
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