Salmo salar (Atlantic salmon): 106561231
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Entry
106561231 CDS
T04363
Symbol
shank3
Name
(RefSeq) SH3 and multiple ankyrin repeat domains 3
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
sasa
Salmo salar (Atlantic salmon)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
SH3_2
Ank_5
SH3_9
PDZ_6
FERM_f0
PDZ
SH3_1
Motif
Other DBs
NCBI-GeneID:
106561231
NCBI-ProteinID:
XP_013980425
LinkDB
All DBs
Position
ssa10:87561918..87943496
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AA seq
1747 aa
AA seq
DB search
MPLRPAAGKHEPPSSPQQDQHTHSHPYRHTNGSQGASSDSSSSREEDSGIPVSVSVFSFR
PARERSPSAGGGMAQAQGNTLVIRIGIPDLAQTKCMKFDVDAPIWLSKQHILCTLNQSLK
DVLNYGLFQPAHNGKAGKFLDEERQLKEYPLPSVTPVPYLEFRYKRRLYTQSHLDDKQLS
KLHTKANLKKFMEYVQQRNIEKVSKFLEKGLDPNFHDPESGECPLTMASQLEGCAELIKV
LKSGGAHLDFRTRDGITALHKAVRTKNHTALITLLDLGASPDYKDSRGLSPLYHSSMVGG
DPYCCELLLHDHAQVGCVDENGWQEIHQACRHGHVQHLEHLLFYGADMTAQNASGNTALH
VCALYNQDSCTRVLLFRGANKEIKNYNSQTAFQVAIIAGNFDLAEIIKIHKVSDVVPFRE
TPSYTNRRRVLVGGLPSPRSLLRSASDNNLNGDSSQGLGQGLGQGHGRQGQSPVPSLRSL
PALGQHQQHASLGETRHGEMPDSSLQSTGSSRSSHSRSPSLHSHLHEGDQGIRKTHGHPL
GHVPRGRLSPGTVQRDPSPPTHTPPAIAGASGPKRKLYSAVPGRTFIVVKPYTPQGEGEI
QLNRGERVKDYDSNDVEVLSIGEGGFWEGTVKGRTGWFPADCVEEVQMRQYDPRLETRED
RTKRLFRHYTVGSYDNVTSYSDYIIEEKNAMLQKKENEGFGFVLRGAKAETPIEEFTPTP
AFPALQYLESVDVEGVAWRAGLRTGDFLIEVHGVNVVKVGHKQVVSLIRQGGNSLLMKVV
SVTRKPESEEVVRKKAPPPPKRAPSTTLTLRSKSMTAELEELASVRRRRGERLDEMLAPQ
EPVTLRSQPTEADYRAATVKQRPTGRRITQSEISSLFERQGMALHGGLHPRMERAHMQLP
RGMSRTKSFGATEEDRLSVLAGEHRFPRSSSMTDSLRDHSHSHSIPPPPQTAPPPPPSLY
YLDTGPPPAFCPPPPPARGHGQGHDPGGRSSFKPSSLDLDRPYDPSPRQSSHIERQKKAR
SMIILQDSSHLPVEPTDIPRPSASATPPERIKRKGRVIDNPYANVGQFSIGLYTPTKPQR
KKSPLVKQLQVEDAQERASIALAAAHSRETSPSGRHTHTHGHTHTSRADYYQQQLMVERE
RMRLQGEALLQGKGPFAVAIAGAVKDRERRLEERRKSTVFQSVGTMEGGSGSAPEPPSYT
TSRSIDERLLSRELGQLPPPALALRPSPGGTTFIHPLTGKPLDPNSPLALALAARERALT
SQSQSPASSPEPRTKQDRAGVGGQGASLFIESQTKEPQHGGGRPGSPQAGKSQWGVSSPA
LLRQEMEGRGEERKEVRRTEDKKSMLISIMDTSQQKTAGLIMVHATSNGQAVGLGPGLEK
TPTSPATEPIKPSLSRALSPSPSASQLQAQGPSSPAQAPLAQGSSEEDVEPYTVSLPPAM
LSSSDEETREELKKIGVLPPPDEFSNGLLANSQAQAQGTPVPQSKSTTSPTTPTLLTPST
PNPSLTPTSSLTPTQPQGPPLQPTPGGAVVSGKPSYPDQPHPPALLAESGSAADSGVEEA
DTRSSSERERDHHLETTSTVSTVSSMSTLSSESGEPADTHTSYADGQTFVLDKPPVPPKP
RLKSHIGGNKGPVTFRDPLLKQSSDSELLSQQQAAALAAAAAGGAGLGHGGLGSGGLGHG
GLGSGGLGHGGLGSGGLGHGGLGSGGLGHGGLGSGGLGSGSISSLVGGPGRPRYLFQRRS
KLGGNHR
NT seq
5244 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgcgtcctgcagccggcaaacatgagccacccagctctccacagcaggaccag
cacacacactcacacccctacagacacaccaacggcagccagggggccagctctgacagc
agcagctcacgggaagaggacagcggcattcccgtttctgtcagtgttttctctttccgt
cccgctcgggagcggagccccagtgcaggaggaggcatggcgcaggcacagggcaacacg
ctggtgatccgcatcggaataccggacctggcacagacgaaatgtatgaagttcgatgtg
gatgctcctatctggttatctaagcagcatatcctgtgtactctgaaccagagcctgaag
gacgtgctgaactacggcctcttccagccagctcacaatggaaaggctggcaagttcctg
gatgaagagagacagctgaaggaatacccactgccttctgttacacctgtaccatacctg
gagttccgctataagagacgtctctacacacagtcccacctggatgacaagcagctctcc
aaactacacaccaaggcgaacctgaagaagtttatggagtatgtacagcagaggaacatc
gaaaaggtgtccaagttcctggagaaaggtctggaccccaacttccacgaccctgaatcg
ggagaatgtcctctgaccatggcatctcagctggagggctgtgcagagctcatcaaggtg
ctgaagagtggaggagctcacctggacttcaggacccgagacggcatcactgcactgcac
aaggctgtccgcaccaagaaccatacggccctcataacgttgctggacctgggtgcgtct
cctgactataaggacagtcgggggttaagtccgctttatcacagctctatggtaggagga
gacccctactgctgtgaacttctgctccacgaccacgctcaggtgggctgtgtggacgag
aacggctggcaggagatacaccaggcatgccgtcatggtcatgttcagcacttggagcac
ctgctgttttacggagccgacatgactgctcagaacgcctctggaaacaccgcccttcac
gtctgtgccctctacaaccaggatagctgtaccagagttttactgtttcggggagcgaat
aaagagatcaagaactacaacagccagacagcctttcaggtggccattatagcaggaaac
tttgatctggctgaaatcatcaagatccacaaagtgtcagacgttgtgcctttcagggag
accccctcctacaccaaccgtagacgtgtgttggtgggaggactgccctcgccccgctcc
ctgctgcgctcggctagcgacaacaacctcaatggggacagcagtcaaggtctgggtcaa
ggtctggggcagggtcacggtcgacagggtcagtctcctgtcccctctctgagaagcctc
cctgcactgggacaacaccaacaacatgccagcctgggggagactcgtcatggagagatg
ccagacagcagtctccagagcacaggcagctctcgctcctcccactcccgctctccctca
ctacacagtcatctgcatgagggcgatcagggcatcaggaagacacacggacaccctcta
ggacacgtccctcgaggacggctcagcccgggtacggtgcagcgggaccccagtcccccc
acccacacccctcctgccattgccggtgccagcgggcccaagcggaaactctacagcgcc
gtaccgggacgtaccttcatcgtggtcaaaccgtacacaccacagggcgagggagagatc
cagctgaaccgtggagagagagtgaaagactatgactctaatgacgtagaagtgttgagt
ataggagaaggaggtttctgggagggcacagtcaaggggagaacaggctggttccctgcc
gactgtgtggaagaggttcagatgagacagtatgaccctcggctagagacaagagaggac
cgcactaagagactgttcagacactacactgtgggatcttacgacaacgtcacctcatac
agtgattacatcatagaggagaagaatgctatgctgcagaagaaagaaaacgaaggcttc
ggcttcgtcctgcggggagccaaagctgagacgcctattgaggagttcaccccaacacct
gcattccctgccctccagtacctggagtctgtcgacgtagagggagtggcctggagggct
gggcttaggacaggagacttcctcatagaggtgcacggagtgaacgtggtgaaggtgggc
cataagcaggtggtgtctctgatcagacaggggggcaacagcctgctgatgaaggtggtc
tctgtcacacgcaaacctgagtctgaggaggtggtccgcaagaaagctcccccgccaccc
aagagagcccccagcaccactttgacactgcgctccaagtctatgaccgccgaactggag
gaactggcttccgtccggaggaggagaggagaaaggctagatgagatgctagcacctcag
gagcctgtgacgttacgttcccagcccacagaggctgactacagagctgctactgtcaaa
cagagacctaccggcaggagaatcacacaatcagagatcagttcgttgtttgagaggcag
ggcatggcattacatggtgggctccacccaaggatggagagggctcatatgcagctgcct
agagggatgtccaggaccaagtcatttggtgcgactgaggaggaccgtctgtcggtgttg
gctggagaacatcgtttcccccggagctcctccatgacggacagcctcagagaccactcc
cactcccattctatcccgccccctccccagaccgcacctcctcctcccccttccctctac
tacctggacactggccctcctcctgctttctgcccccctcctccccctgccaggggtcat
ggtcagggtcatgaccctggaggtcgttccagcttcaagccctcctccctggacctggac
cggccctacgacccatcgccccgccagtcctcccacatcgaacgccagaagaaggctagg
tcaatgattattctacaagattcctcccacttacccgtggagcccaccgacatcccccgc
ccctccgcatccgctacaccaccagagcgaatcaaacggaaaggccgggtgattgacaac
ccgtacgccaatgttggccagtttagtattggattgtacacacccaccaagccccagcgc
aagaagagccctctggtgaaacagctacaggtggaggacgcacaggagagagccagcatc
gccttggccgctgcccactcccgagagacctccccctctggtcgacacacacacacccac
ggccacacacacaccagccgggccgactactaccagcagcagctgatggtggagcgcgag
cgtatgcgtctccagggagaggccttgctgcaggggaaagggccgttcgctgttgctatc
gctggcgccgtgaaggaccgagagcgccgactagaggagcggaggaaatccacagtcttc
cagtcagtggggaccatggagggggggtcggggtccgcccctgagcccccctcctacacc
acatctcgatccatcgatgagcgcctactcagcagagaactaggccagctgccacccccc
gctctggccctgcgcccctcacctggcggcactaccttcatccacccactcacagggaag
cccctggaccctaactcaccccttgctcttgcgctggccgcaagggagcgggcacttacc
tcccagagccagtcccccgccagcagccctgagcccaggactaaacaggacagggctggt
gttggaggtcagggggcttcgcttttcatcgaaagccagaccaaagagcctcagcatggg
ggcgggaggccggggtcgccccaggctggtaaatcccagtggggagtgtcatcacctgcc
ttgcttcgccaggagatggagggaagaggggaggagaggaaggaggtgaggagaacggag
gataagaagagtatgttgatcagtatcatggacacatcacaacagaagacagctggacta
atcatggtccatgccaccagtaacggccaggcggtggggctgggaccagggctggagaaa
acccccacctccccagccaccgagcccattaaaccctccctcagtcgggctctgtcaccc
agcccctctgcctctcagctccaggcccagggcccttccagcccagcccaggctcccctg
gcccagggcagttcagaggaagacgtggagccctacacagtgagcctacctccagccatg
ctgtcctccagtgatgaagagaccagagaggagctgaagaagattggggtgctcccacct
ccggatgagttttccaacgggttgttggccaattcacaagcccaagcccaggggacccct
gtaccccagtctaaatccaccacttcccctacaacccctactctcctcaccccttcgacc
ccaaaccccagcctgacccccacctctagcctgacacccacccaaccccagggccctccc
ctccagcctacccctggaggagcagtcgtctcagggaaaccctcatacccggaccagccc
catcctccagccctgctggctgagtctggttcagcagcagactctggtgtggaggaggca
gacacacgcagctccagtgagagagagcgagaccaccacctggagaccactagcactgtg
tccaccgtctccagcatgtccactctgtcctcagagagtggcgaacccgctgacacacac
acctcctatgccgacgggcagaccttcgtgctcgacaagccgccagtgcctcccaagccc
cggctcaagtctcacattggaggcaataaaggcccggtcaccttcagggacccgctgctg
aagcagagctctgacagcgagctgttatcccagcagcaggcggctgctctagccgcagca
gcagccggaggggcagggctggggcatggaggcctagggtctggaggcctggggcatgga
ggcctcgggtctggaggcctggggcatggaggcctcgggtctggaggcctggggcatgga
ggcctcgggtctggaggcctggggcatgggggcctgggttctggaggcctagggtcaggc
tctatatctagcctggtgggaggccccgggaggccccgctacctcttccagaggaggtcc
aagctggggggaaaccatcggtga
DBGET
integrated database retrieval system
