Salmo salar (Atlantic salmon): 106561238
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Entry
106561238 CDS
T04363
Symbol
cpt1b
Name
(RefSeq) carnitine palmitoyltransferase 1B
KO
K08765
carnitine O-palmitoyltransferase 1, liver isoform [EC:
2.3.1.21
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa00071
Fatty acid degradation
sasa01212
Fatty acid metabolism
sasa03320
PPAR signaling pathway
sasa04148
Efferocytosis
sasa04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
106561238 (cpt1b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
106561238 (cpt1b)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
106561238 (cpt1b)
03320 PPAR signaling pathway
106561238 (cpt1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sasa03029
]
106561238 (cpt1b)
Enzymes [BR:
sasa01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.21 carnitine O-palmitoyltransferase
106561238 (cpt1b)
Mitochondrial biogenesis [BR:
sasa03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
106561238 (cpt1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Carn_acyltransf
CPT_N
DUF3128
Motif
Other DBs
NCBI-GeneID:
106561238
NCBI-ProteinID:
XP_013980437
UniProt:
A0A1S3KP75
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Position
ssa10:complement(87157462..87167347)
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AA seq
771 aa
AA seq
DB search
MAEAHQAVGFQFTVTPDGIDLHLSREVLKHIYLSGVTSWIKRAIRFKNGILTGVYPASPS
SWLIAVIAIMSTMYARIDPSLGMIDTIKRTLPVSDYMTVQTQTVLSAILFATGLWLSLIL
MLRYILKALLSYHAWIFESHGKMSFCTKLWLSLVKMFSGRRPLLYSFQASLPRLPVPSVD
DTITRYLESVRPLLDDEQYNQMEVVANDFKRDEAPKLQKYLILKSWWATNYVSDWWEEYI
YLRGRSPIMVNSNFYAMDLLYVIPTHRQAARAGNVVHAMLQYRRKLERGEHAPLRALGVV
PMCSYQMERMFNTTRIPGIETDFVQHLSDRKHLVVYHKGRFFKVWLYYGGRHLWPSELET
QFQRILDDTTEPQPGELKLAALTAGNRVPWARARLKYFSQGVNKASLEAIETSAFFLTLD
DEEHGYDPDKLGSLDLYAKSVLHGKCYDRWFDKSFTLIAYKNGKLGVNAEHSWADAPIVG
HMWEYVLATDCFHLGYTEEGHCKGDINKGLPPTAKLQWDIPLECQEVIEDSYMVAKEIAD
DVDFHGCLFDEFGKGLIKKSRTSPDAFIQLALQLAQFRDKGEFCLTYEASMTRMFREGRT
ETVRSCTIESTAFVRAMEDKNTKSAQRLDLFRKAADKHQNMYRLAMTGSGIDRHLFCLYI
MSKYLNIDSPFLKQVLSEPWRLSTSQTPQQQLNMVDINKFPRYVGAGGGFGPVADDGYGV
SYIIVGENLITFHISSKFSSPETDSYRFGQNIRQAMLDIRALFDQNDKKEM
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcacatcaggcggttggcttccagttcaccgtcaccccagacggcatcgac
ctccacctgagccgcgaggtactcaaacatatctacctgtcgggagtgacgtcatggata
aagcgcgccataagatttaagaatgggatattgacaggcgtctaccctgccagcccatcc
agttggctgatcgcggtgatagccatcatgagcaccatgtatgccaggatagacccatca
ctgggaatgatagataccatcaagaggaccctgcctgtcagtgactacatgacagtgcag
acccagacagtgctgagtgccatcctgtttgccacgggcctgtggctctctctcatcctc
atgctgaggtacattctcaaggcccttctctcctaccacgcctggatctttgagtcccac
ggcaaaatgagcttctgcaccaaactctggctgagtctggtgaagatgttctctggccgc
agacctctcctctacagcttccaggcctccctacccagactacctgtgcctagcgtggac
gacaccataaccaggtacctggaatcagtgcgccccctgctggatgatgagcagtacaac
cagatggaggtggtggccaatgacttcaagagagacgaggcacccaaactccagaaatac
ctcatcctcaaatcctggtgggctactaactacgtgagtgattggtgggaggagtacatc
tacctgagaggcaggagtcccatcatggtcaacagtaacttctacgccatggatctgctg
tacgtgattcccacacacagacaggcagctcgggcagggaatgtggttcacgctatgctg
cagtaccgacgcaaactagagagaggagaacatgcaccgttgagggctctgggggtggtg
cccatgtgttcctatcagatggagaggatgttcaacaccacacgtatccctggcatagag
acagactttgttcagcacctgagtgaccggaagcacctggtggtgtaccataagggccgc
ttcttcaaggtgtggctgtactacgggggacgccacctctggccctctgagctggagact
cagttccagaggatcctcgacgacaccacggagccacagcctggggaactcaaactggct
gccctcacagccggcaacagagttccttgggcgcgggctcgtctgaagtacttcagccag
ggtgttaacaaagcctctctggaggccatcgagacgtcagccttcttcctcacccttgac
gacgaggagcacggttacgaccctgacaagctgggatcattggacctgtacgccaagtcc
gtgctgcacgggaagtgttatgacaggtggtttgacaaatccttcaccctgattgcttat
aagaatggtaaactgggggtcaatgcagaacactcgtgggcagacgctcccattgtagga
cacatgtgggagtacgtcctagcaacggactgcttccatctgggttacacagaggagggg
cactgcaaaggagacatcaacaagggcctgcctcccaccgccaaactgcaatgggacatt
ccattggagtgccaggaggtcattgaggattcctacatggttgccaaggagatagctgat
gacgtggacttccatggctgcctgtttgatgagtttgggaagggcctgatcaagaagagt
aggaccagtcctgatgccttcatacagctagcactgcagctggctcaattcagggataag
ggggagttctgtctgacgtatgaggcctcgatgacccggatgttccgtgagggtaggaca
gagacggttcgctcctgcaccatagagtccacagccttcgtcagagccatggaagacaag
aacactaagagtgcccagaggttggatctcttccggaaggctgcagacaaacaccagaac
atgtatcgtctggccatgacaggctctggcatcgacagacacctcttctgtctttacatc
atgtccaagtacctcaacatcgactcaccattcctcaaacaggtgttgtcagagccctgg
aggttgtccactagtcagactcctcaacagcagctcaacatggtcgacatcaacaagttc
ccaagatacgtgggtgcaggaggggggtttggccctgtggctgatgacggctatggcgtc
tcttacatcattgtaggagagaacctcatcacattccacatctccagcaagttctccagc
cctgagacggactcgtaccgctttggacagaacattcgacaggccatgctggacattcgt
gcgctatttgaccaaaacgacaagaaagagatgtga
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