Salmo salar (Atlantic salmon): 106561490
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Entry
106561490 CDS
T04363
Name
(RefSeq) paired box protein Pax-6-like
KO
K08031
paired box protein 6
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106561490
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
106561490
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
Homeobox_KN
HTH_Tnp_IS1
TrmB
Motif
Other DBs
NCBI-GeneID:
106561490
NCBI-ProteinID:
XP_013980980
UniProt:
A0A1S3KQT3
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Position
ssa10:100617553..100637393
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AA seq
467 aa
AA seq
DB search
MPQKEYYNRATWESGVASMMQNKVYDYNEGHSGVNQLGGVFVNGRPLPDTTRQKIVELAH
SGARPCDISRILQTHGDAKVQVLDNENVSNGCVSKILGRYYETGSIRPRAIGGSKPRVAT
PEVVGKIAVYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSVSVSSINRVLRNLASEKQ
QMGADGMYEKLRMLNGQTGTWGTRPGWYPGTSVPGQPNPDGCPQSDGGGENTNSISSNGE
DSDETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ
VWFSNRRAKWRREEKLRNQRRQASNSSSHIPISSSFSTSVYQPIPQTTAPGWMSFSSGSM
LGRPDTALTNTYSALPPMPSFTMANNLPMQAPVSSQTSYSCMLPTSPSVNGRSYDTYTPP
HMQAHMNSQSMAGSGGNSTGLISPGVSVPVQVPGSEADMSQYWPRLQ
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaaaaagaatactataaccgggccacgtgggaatctggcgtcgcgtccatgatg
caaaacaaggtgtatgactataacgaaggtcacagcggagtgaatcagctcggcggagtg
ttcgtcaacggcagacccctgcccgacaccaccagacagaaaatagtcgagcttgctcac
agtggcgcgcggccgtgcgatatatccaggattctgcagacccatggtgatgcaaaagtt
caagtgctggacaatgaaaacgtgtcaaacggctgtgtgagtaagattctgggcagatac
tatgaaaccggctccatccgaccaagggcgatcgggggtagcaaaccaagagtagcaact
cccgaggtggtcggaaaaattgcagtatacaagagggagtgcccttcaatcttcgcgtgg
gaaattcgtgacagactgctatccgagggggtctgcacaaacgataatatacccagtgta
agttcagtgagtgtgtcgtcgataaacagagtactgcgcaacctggctagcgagaagcaa
cagatgggcgcagatggcatgtatgagaagttgagaatgctgaacggtcagactgggacg
tgggggacccggccgggctggtaccccggaacctcagtgccaggacagcccaacccagat
ggttgtccacagtcagacggtggaggtgagaacactaattcaataagttcgaatggagaa
gactcggatgagacccaaatgagacttcagctcaaaagaaaactgcaaaggaaccgcact
tcgttcacacaagaacagatagaagcgcttgagaaagagtttgaaagaactcactatcca
gatgttttcgcaagggaaagacttgctgcaaaaattgacctcccagaggccagaatacag
gtgtggttttcaaatagaagggcaaagtggaggagggaggagaaactacggaatcaaaga
cgacaagccagtaactcctccagtcacatccctatcagcagcagtttcagcaccagtgtc
taccagcccatcccacagaccacagcaccaggttggatgtcgttctcgtcaggatccatg
ttgggaagaccagacacagcccttacaaacacatacagtgccctgccacctatgccaagc
ttcaccatggccaacaacctgcctatgcaagcccctgtgtccagccagacctcctactcc
tgcatgctgcccaccagtccctcagtcaatggacggagctatgacacgtacacccctcct
catatgcaagcacatatgaacagccaatcaatggctggttcaggaggcaactcaacaggt
ctcatctctcctggagtatctgttcctgttcaagtcccaggcagtgaagcagacatgtcg
cagtactggcccaggctacagtag
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