Salmo salar (Atlantic salmon): 106561524
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Entry
106561524 CDS
T04363
Symbol
tdrd12
Name
(RefSeq) tudor domain containing 12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106561524 (tdrd12)
Enzymes [BR:
sasa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
106561524 (tdrd12)
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Gene silencing
piRNA pathway
106561524 (tdrd12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
Motif
Other DBs
NCBI-GeneID:
106561524
NCBI-ProteinID:
XP_013981048
UniProt:
A0A1S3KQS3
LinkDB
All DBs
Position
ssa10:102161166..102190419
Genome browser
AA seq
1536 aa
AA seq
DB search
MLEINMLKVENPSCLWGRFVKGPGIEAVENKKKYDDLQMKMNLFYHEVNLDVQKIKPSTI
EAGQVCVVYWSALRSWCRAIVESLFLGTVGTQAMCFLVDHGERVIVSSDEIRALLDTFLQ
LPFWVRKFQLAGVHPMTLHVSGDCLEKAELIPSTQWDSSATRYLHNLLQASTEMEAVLCE
TQADCIAIELYLTVKNVKICVNDDLVSKKFAYFTSQKAHQTSGKNGVVDRSPAVLACDIF
SETQNFLATDGCTVRSLSDFLLRQQDTIVHNQVADQCQLTTSVKEASTASNEVSNPKKSL
ENGRNPLEGGKKKAAQQQNKKSKTFSEIDGDEDESYDEPGEDTDTSLVSELFKSLNLLRF
MKFLNPASSTQRAAIPNTELIEQKEERGVQRISAITEKAEEEPVTAAQQTGQQTETAVCT
PSDLEDRTQEFVFTEQPTIEEELVCARLLQLLNPDSLNPDVDSSEVTIVHTDPSRSGIMV
HSAFTLDPCTSLANAPITDTFRRILMRKKYVGPSVAESYCWPAVARGCDTVLISHSGDQP
LTYIPPFLAHMQLSSVFSALSSRTGPIAVILCPGWEKAQTVIDLLEESQTVQVLHPMVIL
LGLGKDEAKTVKIQNNCQVVVTTPFSLVRLLRLHCFLFLRLCHLALDEVDLLFSRAPDEM
TTILQHFQRVTASEERVSCPRQIIAVGKRWSRHLEGLLHNHMSNPTVVVTVMEEAALYGN
VHQIILLCLDCTKISVLLGALDFTPDVAQKTLVITNSSEEAEHVFKAVSSTSAFSLKVHE
ELTYQFDFVTEQWKKPIGPGTHVILVTTNECMKSLGICDATCVVHYGFPSSPKLFGSRLF
CMSQNFQNLSDKERAAESTAHPAKSVLLLSERNARHVIGVLRYLKRTETSLPPELLHFAQ
GVLRAKEEQKSDRPLCSYLKSFGFCRDSSVCSYRHCISPITDQPLQPDSGTIVVLPLFIK
TASVYYGRIVSKKEDSYESLAAEMTTYYAAEKLGAKEVLEGGLYGVQEDEVYHRVRVTSV
PDKGEWMFCNVRALFLDEGREQEVKSHQLLQLPAQFHTLPPQALEIIVCRAMPIDAEVKW
NPKVTRAISQKIKGLQHQAKVVLCLGNTVFVDPMVRMTRLPGLKTFINEYNVHAEILSTG
MGTCNPQHLDLLKELCQGAGPGASAGDAPLTTVPDDSGVTLEDKVQAAEEALVHRMRAAV
ERLHCGQEVSVDLPQTQTSVLHAQTDLSQCHMKASADLHQMDQKVFAHAPQPRMNHVFVY
PTQLSPKPQEAPLAAVPDPSEAQLPTLMDRAQIPSPLPTPSEAQISAPLPTTSEPQLPAP
TTTHNDPKMEQWRSLIANLQGATQTRRHTALQGFTPKDWISAVPRPIENGNLVDEKQVNG
QQVINGEKVISVDKVAVDAPKRYLSFHPQIKWFQRDDTVTLNIKLREPVDQRCEFFPDRV
VYSACVNDRPYRADLELHSNVTAERCSWEMKCNEPVIRLVKQERGDWKMLLKQKSAFVSL
DFDRFEEDEKKTSNGLCFVGHTGEEGCYVSSDSSSD
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaaataaatatgttgaaagtggagaacccgtcctgtctgtggggtcggtttgtg
aagggtccagggatagaagcggtcgagaataaaaaaaaatatgatgatctgcaaatgaaa
atgaaccttttctatcatgaggtcaacctagatgtgcagaagatcaaaccctcaactata
gaggcgggacaggtgtgtgtggtgtactggtctgccctaaggagctggtgccgagccatc
gttgagtctcttttcctgggcaccgttggaacccaggccatgtgtttcctagttgaccac
ggagagcgtgtcatcgtcagctcagacgagattcgggctctgttagatacgtttttgcag
ctgcccttctgggtgaggaagtttcagctcgctggtgttcatcccatgacgctgcatgtg
tctggagactgcctggagaaagctgagctcataccatcaacgcaatgggacagctctgcc
acacgctatttgcacaatctcttacaagcttctaccgagatggaggcagtgttgtgtgaa
acacaggcagattgcattgccattgagctctacttgacagtcaaaaatgtcaagatctgt
gtgaacgacgatctggtctcaaagaagtttgcttacttcacaagccagaaggcccatcaa
accagtggaaaaaatggtgttgttgatagatccccagccgtcttggcttgtgacatcttt
tctgaaactcagaacttcctggctactgacggctgcaccgtacgatcactttcagatttc
ctgctccggcagcaggacacaatcgttcataatcaagtggctgatcagtgccagctaacg
acatctgtgaaagaggcatcgacggcttccaatgaggtatcaaatccaaagaaaagtcta
gaaaatggaagaaatcccttagagggaggaaaaaagaaggcagcgcagcagcagaacaag
aaatccaagacgttttcagagattgatggcgacgaagacgagagctatgacgagcccgga
gaggacaccgacacatctcttgtgtcagaactgttcaaaagtctgaatctgttaagattc
atgaagtttctgaatcctgcttcgagcactcaaagggctgctattcccaacactgagctt
attgaacagaaggaggaacgtggtgttcagaggatctctgcgatcacggagaaagcagag
gaagagccggtcactgcagctcaacagaccggacaacagactgaaacggctgtatgtact
cctagtgacctagaagaccggacacaagagtttgtcttcacagagcagccaaccattgag
gaggagctcgtctgtgctcggttgttgcagttgctaaaccctgactctctgaacccagat
gtagactcatcagaagtcactattgtccatactgatccaagcaggagtgggataatggtg
cattctgcctttactctggacccctgcaccagtctggccaatgctccaatcactgacacc
ttccggaggatcttgatgaggaaaaagtatgtcggcccgtctgtggctgagagttactgc
tggccggcggtggccaggggctgtgacacggtcctcatctcccacagcggagaccagccc
ctcacctacatcccaccgttcctggcccacatgcagctctcctccgtcttcagcgccctc
tcttctcgtaccgggcccatagcggtgatcctgtgcccggggtgggagaaagcccagact
gtgattgaccttctggaggagagccagaccgtccaggttctccaccccatggtcatactg
ttgggactgggaaaggacgaggcaaagaccgttaagatccagaacaactgccaggtggtg
gtgaccactccattcagccttgtgcgtctgctgcgtttgcactgtttcctgttcctgcgg
ctgtgtcacctggcgctggacgaagtggacctgctcttttctagagccccggatgagatg
accaccatcctgcagcacttccagagggtgacagccagcgaggagcgtgtgtcgtgcccc
agacagatcatcgcagtgggaaagcgctggagccgccacctggagggcctgctccacaac
cacatgagcaaccccaccgttgtcgtcacagtgatggaggaggccgcactctatggaaat
gtgcaccagattatcctgttgtgtctggactgcactaagatctctgtcctgctcggggca
ctggacttcacccccgacgtggcccagaagaccctcgtcatcaccaactcttctgaagag
gccgagcatgtcttcaaggctgtttcaagcacatcggcgttctccctgaaggtccatgag
gagttaacctaccagtttgactttgtgactgagcagtggaagaagcccattggacctggc
actcatgtcattctggtcaccaccaatgagtgtatgaagtctttgggtatctgtgatgct
acgtgtgttgtgcactacggcttcccaagctcacctaagctgttcggcagccgtctgttc
tgcatgtcccagaacttccagaacctttcagacaaggagcgtgctgcagagagcacggcc
caccctgccaagtcggtgctgctgctatctgagaggaatgcccgtcacgtaatcggggtc
ctgcgctacctaaagcgtactgagacctcgctgcctccagagctgctgcactttgcccag
ggagtcctgcgggctaaggaggaacagaagtcagacaggcctctgtgcagctacctcaag
agctttggcttctgcagggacagcagtgtatgttcttatcgacactgcatcagccccata
acagaccagccactgcaaccagactctggaactattgtggttctgcccttgttcatcaag
actgcttccgtctactacggacgcattgtgagtaagaaggaggacagttatgagagcctg
gcagcagagatgactacatactacgccgctgagaagctgggtgctaaggaggttctggag
ggagggctgtacggagtacaagaggatgaggtctaccacagggtgcgggtgacttcggtg
ccggacaagggtgagtggatgttctgcaacgtgagggctctgttcctggatgaggggcgt
gagcaggaggtgaagtcccaccagctgctgcagctgccggcccagttccacacactgccg
ccccaggctttggaaatcattgtctgcagggccatgcccatcgacgctgaggtcaaatgg
aaccccaaggtcaccagggccatcagtcagaagatcaaaggcctgcagcaccaagccaag
gttgttctgtgtttgggaaacacggtcttcgtcgatcccatggtgcggatgacccgacta
ccaggtctgaagaccttcataaatgagtacaacgtccacgctgagatcctgagcacgggg
atgggcacctgtaaccctcagcacctggacctgctgaaggagctctgccagggggctggg
cctggagccagtgctggggatgccccgctcaccacggtgccggatgactctggggtgacc
ttggaggacaaggtgcaggctgcagaggaggccctggtccacaggatgagggcagctgtc
gagcgcttacactgtggccaggaggtttctgtagacctgccccagacccaaacgtctgtg
cttcatgcccagacagacttgtcccagtgccatatgaaggcctcagcagatctgcaccag
atggaccagaaggtctttgctcatgcaccccagcctcggatgaaccatgtctttgtatac
ccgacccagctctcgcccaagccacaggaggccccattagcagcagttcctgatccaagc
gaggctcaactaccaacactcatggacagggcccagataccttcccctctcccaacacct
agcgaagcccagatatctgccccactcccaacaactagcgagccacagttacctgcccca
acaaccacgcacaatgaccccaaaatggagcaatggaggagcctcatagctaacctccaa
ggcgccactcaaacacggaggcatacagctctacaaggattcacccccaaagactggatt
tctgcagttccccgccccattgaaaatggtaatttggtcgatgagaagcaagtcaacggc
cagcaagtcatcaacggtgagaaagtcatcagtgttgacaaggttgctgtggatgcacca
aaacggtatttgagtttccatccacagatcaagtggttccagagagatgacacagtcaca
ctgaacataaagctcagagaaccagtggatcagagatgtgaattcttccctgacagagtg
gtgtacagtgcgtgtgtgaatgacaggccttatcgtgctgacctggagctccacagtaac
gtcactgcagagaggtgctcctgggagatgaagtgcaatgagccagtcatcaggctcgtc
aaacaggagaggggagactggaagatgctcctcaagcaaaagagtgcttttgttagtttg
gatttcgaccgatttgaggaagatgaaaagaagacttcaaatggtctctgctttgtgggg
cacactggggaggaaggctgctacgtgagctcagacagtagcagtgactga
DBGET
integrated database retrieval system
