Salmo salar (Atlantic salmon): 106561528
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Entry
106561528 CDS
T04363
Symbol
papd5
Name
(RefSeq) poly(A) RNA polymerase D5, non-canonical
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106561528 (papd5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106561528 (papd5)
03016 Transfer RNA biogenesis [BR:
sasa03016
]
106561528 (papd5)
Enzymes [BR:
sasa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
106561528 (papd5)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
106561528 (papd5)
Transfer RNA biogenesis [BR:
sasa03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
106561528 (papd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
PAP_NTPase
TUTase
Motif
Other DBs
NCBI-GeneID:
106561528
NCBI-ProteinID:
XP_013981058
UniProt:
A0A1S3KQT2
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All DBs
Position
ssa10:complement(102512162..102528434)
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AA seq
598 aa
AA seq
DB search
MQGTINPKGDNKIEQLSDLLEENINQHPVGKGSSGAGIVGGTAFGSWRGREREYESGNRR
RGDNRASTFGFNRSLLSFSCNSTVDETGCRRVGYTDTPWKTRNYAAGILGLHEEIQDFYA
YMSPRPEEEKMRREVVERIERVIKDLWPTADVQVFGSFSTGLYLPTSDIDLVVFVKFREG
DTLPLWRLEEALRKHKVVEENSVKVLDKATVPIIKLTDSLTEVKVDISFNMKNAVKAAAL
IKDYKKKYPVLPYLVLVLKQFLLQRDMNEVFTGGISSYCLFLVAVSFLQLHSRENACSPN
ANTGVLLIEFFELYGRHFNYLKTGIRIKDGGCYLSKDEIQKSMLDGYRPSLLYIEDPLQP
GNDVGRSSYGAMQVKQVFDYAFMVLSHAVSPIAKYHLNNHGESILGRIIRVTQEVAEYRD
WITMKWAALSLNSLTLKGNVTLLVELQEMEECINNLSEEGAESHSSSSPPPSSSFSSPQS
SSASSSDADSDGIHCKPVTTTRGRRGSSAPSAGLTNHRDTSFSSSSRVSQSNKSKQVDRA
SLTSCQNSHANKQPSTGTGQSSGSNSRSHRDRKQSCPGRRRKPQPKHQCKPAVQDLCR
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgcaagggacgattaatccgaaaggcgataataaaatagaacaactatccgatttattg
gaagaaaatatcaaccagcatcctgtggggaagggcagtagtggtgccgggattgtgggt
ggcactgcattcggtagctggagagggagagagagagaatacgaatctgggaacagaagg
aggggagacaaccgagcgagcactttcggttttaaccgcagtttattgagttttagctgc
aactctacggtggacgaaactggatgccgtagagttggttacacggacacgccttggaaa
accaggaactacgctgcagggattttggggctccatgaggagatccaggacttctatgcc
tacatgtctccgcggccggaggaggagaagatgaggagggaggtggtggagaggatagag
agggtcattaaggacctttggcccactgctgacgttcaagtatttggaagtttcagcacg
ggtctctatctacccaccagtgacattgacctggtggtgtttgtgaagttcagggaagga
gacaccctccctctgtggaggttagaagaggcgctgaggaaacacaaagtggtggaggag
aattctgtcaaagttctggacaaggccacggtgccaatcatcaaactgacagactctctc
acggaggtcaaagttgacatcagtttcaacatgaagaatgccgtcaaagctgctgccctc
atcaaagattataaaaagaaatatcctgtgcttccatacctggtgctagtcctgaagcag
ttcttattacaaagagacatgaatgaagtgtttactggaggcatcagttcctactgcctc
ttcctcgtcgctgtcagcttcttacagctccatagcagggagaacgcctgcagtcccaac
gccaacactggtgtcctactcatagagttctttgagctgtacggccgccattttaactac
ctgaagacggggatccggatcaaggacgggggctgctacctctccaaagacgagatccag
aagagcatgctggatggatacagaccttccctgctgtacatcgaagacccactgcagcca
ggtaatgatgtgggccgtagctcatacggggccatgcaggtgaagcaggtgtttgactat
gccttcatggtgctgagccatgctgtgtcgcccatcgctaagtaccatctcaacaaccac
ggcgagagtatactgggcagaatcatccgggtgacccaggaagttgctgaatacagagac
tggatcaccatgaagtgggctgccctatcactgaactccctgaccttaaaaggtaatgtc
acgttgctggtggagcttcaggagatggaggaatgcatcaacaatctctctgaggaaggg
gcagagtcccacagctcctcctctcctcccccctcttcgtcattctcctcgccacagtct
tcatcagctagctccagtgatgctgattcggacggaatccactgtaaaccggtgactacg
acgcggggtaggcgaggctcatctgcacccagtgctggattgaccaatcacagggataca
agtttctcttccagcagccgcgtaagccagtcgaacaagagcaagcaggtggacagagcg
agtttgacgtcttgtcagaacagccatgctaacaaacagccaagcacaggaacaggacag
tcatcaggcagcaacagcaggagccaccgagacagaaagcagagctgtcctggcaggagg
aggaaaccccagccaaagcaccaatgtaaacctgcagtgcaggacctctgtagatag
DBGET
integrated database retrieval system
