Salmo salar (Atlantic salmon): 106561543
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Entry
106561543 CDS
T04363
Symbol
lgr5
Name
(RefSeq) leucine rich repeat containing G protein-coupled receptor 5
KO
K04308
leucine-rich repeat-containing G protein-coupled receptor 5
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
106561543 (lgr5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
sasa04030
]
106561543 (lgr5)
G protein-coupled receptors [BR:
sasa04030
]
Rhodopsin family
Others
R-spondin
106561543 (lgr5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
7tm_1
LRR_9
LRRNT
DHU1_N
Motif
Other DBs
NCBI-GeneID:
106561543
NCBI-ProteinID:
XP_013981091
UniProt:
A0A1S3KQV5
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Position
ssa10:complement(102879287..102913563)
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AA seq
837 aa
AA seq
DB search
MVIMCFLAIIMLTFLLGVADCAGTERTGVLDTDTDCPSLCNCEDDGMLLRVDCVDLGLAE
LPSKLSVFTSYLDLSMNNLTLLPNRALSNLHFLQELRLAGNDLTDIPEGAFSGLFNLKVL
MLQNNHLKQIPSKALENLRNLQSLRLDANQIASVPESSFRGLASLRHLWLDDNTLTEVPV
HALAILPTLQAVTLALNSITHIPDHAFANLTSLVVLHLHNNQIQSLGDRCFDGLLSLETL
DLNYNDLAMFPTAIRALPNLKELSFHSNNIRSVPEQAFVGNPSLVTIYFYNNPIQFVGKS
AFQHLPALRMLSLNGATDITEFPDLTGTNSLETLAVTGTHISSLPGTLCDQLPNLIQLDL
SHNLIQHLPSFSGCRKIQKIDLSSNLLTSVPMEGFQDLTHLRLAGNTALRHALPVQRLPK
LRVVEMPYAFQCCAFVPGENSKSPYVWKTENISKDLVTGKEIHIIANQEDARDQNNFLVE
SEVDARPQHSVHCSPAQGPFQSCQSLFGSWLVRVAVWIIVILSLVSNSLVLLSIALSSKS
PTSPTQHLLGVLAWVHLLNGVSSAALAVLDGISFDHYTDYGAWWEGGPGCWIFDFLSVFS
SEASVFLLTAVVLDRGCTVRDSQWSETEARRIPLGWGCAQGISALCCFLAGAIAALPPLT
MGEYGVSSLCVASPYGHSSRFGFSYATALVLLNSLCYLLMTAIYTRHYCHMDRDTADKEG
VTVQDYSVTKLMACLLFTNCLLSFPVTLPSFSSLLQLSSPKVAKAILLFVGPLPSCLDPL
LYMLLSPHFREDLSRLLYWTTHRLKKGQRRTSLFSVNSEDMEKKSCDSMQALVSLTL
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggttattatgtgttttcttgcaattattatgctcacttttctgcttggagtggcggac
tgcgcgggcacagaacggaccggggttcttgacaccgacaccgactgcccgtcgctttgt
aactgtgaagacgacggcatgcttctgcgcgtggactgtgtggacctcggtctcgcggag
ttgccgtcaaaattgagcgtatttacttcctaccttgatctgagtatgaacaacctcacc
ctgctgcccaacagagccctttccaacctacacttcctccaagagctacgactagcagga
aatgacctaacagacatccctgaaggggctttctctggcctcttcaatctcaaagtacta
atgctacagaacaatcacctaaagcagattcccagcaaggctcttgagaacctgaggaac
ctacagtctctgcggttggatgccaaccaaattgccagtgttcctgagagctcctttagg
ggcctggcatccttacgccacctgtggctggatgataataccctaacggaggtgcccgtc
catgcactggccatcctgccaaccctgcaggcagtgaccctggccctcaacagcatcacc
cacatcccagaccacgctttcgccaatctcaccagtctggtggtcctgcatctccataac
aaccagatccagtcgttgggtgataggtgttttgatgggcttctcagcctggagactcta
gatttgaactacaacgaccttgccatgtttcccacggccatcagagccctccctaacctc
aaagagctgagtttccatagcaacaacatcagatctgtcccagagcaagccttcgtggga
aacccgtccctcgtcacaatatacttctacaataatcccatccagtttgtaggcaaatca
gctttccagcatttgccagcgctacggatgctatcactcaacggagccacagatatcaca
gagtttccagacctcactggcacaaacagtttggaaaccctagctgtcacaggtacacac
atctcatcactgccaggtaccctctgtgaccagttacccaacctgatacagctggatctc
tcccataacctgatccagcatcttcccagcttcagtggctgcagaaagatccagaaaatt
gacctcagctctaacctgctgacctccgtccctatggaaggctttcaggacctcacacac
ctcagactcgctggcaacactgccctgagacacgcactacctgtccagagactacctaaa
ctcagggtagtggagatgccctacgccttccagtgctgtgcctttgtacctggagaaaac
tcaaagtccccctacgtctggaaaacggagaacatcagtaaagatctcgtcactggaaag
gaaatacacatcatagccaaccaagaggatgctagagaccagaataacttcctggtggag
agtgaggtagatgccagaccccagcactctgtccactgttccccagcccaaggtccgttc
cagtcatgtcagagtttatttgggagctggctggtgcgagtcgctgtttggattattgtc
atcctttccttggtgtccaactccctggtcctgctatccatcgccctctcctcgaagtcc
ccgacctctcctacccagcatctactgggagtcctggcctgggtccacctcctcaatggc
gtctctagcgccgccctggctgtactagatggcatttcatttgaccactatactgattat
ggtgcatggtgggagggtgggccaggttgctggatctttgactttttgtcggtcttctcc
tcagaggccagtgtcttcctgttgacggcagttgtcttagatcgtggatgtactgtccgt
gactcacagtggtctgaaactgaggccaggaggattccattggggtgggggtgtgctcaa
ggtatctcagctctgtgttgcttcctggctggagccattgccgccttacctcccctcact
atgggtgagtatggggtctcctctctctgcgtggcctctccctacggacactcttcccgt
tttggcttcagctacgccacggccctggtgctgctcaactccctgtgttacctcctgatg
acagccatctataccagacactactgccacatggacagagacacagcagacaaagaggga
gtcactgtccaggactactctgtgaccaaacttatggcctgcctcctcttcaccaactgc
ctcctctctttccctgtgacacttccctccttctcctccctcctccagctctccagccct
aaggtggctaaggccatcctgctgttcgtggggcccctgccctcctgtctggaccccttg
ctctacatgctcctcagccctcatttcagggaggatctcagcaggcttctctattggaca
acacacaggctaaagaaagggcagcgccgcaccagtttgttctcagtgaactccgaagac
atggagaaaaagtcatgtgactccatgcaagccctcgtctctctcacactgtaa
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