Salmo salar (Atlantic salmon): 106561546
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Entry
106561546 CDS
T04363
Name
(RefSeq) nuclear pore complex protein Nup160-like
KO
K14303
nuclear pore complex protein Nup160
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106561546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106561546
03036 Chromosome and associated proteins [BR:
sasa03036
]
106561546
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106561546
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
106561546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_Nup120_160
TPR_NUP160_120_M
TPR_Nup160_C
NUP160_helical
HEAT_Nup120
TPR_1
TPR_2
Motif
Other DBs
NCBI-GeneID:
106561546
NCBI-ProteinID:
XP_013981098
UniProt:
A0A1S3KQX2
LinkDB
All DBs
Position
ssa10:complement(102988934..103024438)
Genome browser
AA seq
1412 aa
AA seq
DB search
MLKGQKRRRYISLLIPQRSAGKMAAVLERSFIEISGFERETLPTFREITVNLGLNALPGS
VIYPDSAGGFHYEGSGKLLSITSNRFIHWSTSGDTVQLVEQSLDTNLLNNAVKLKITHCP
LLPGGVHVQETLNNVTILIVTNQTVHRLVLPHPTRMYRSELVTELQMQSIFTDVGKMSLQ
DPAHSAVIPSPVGQTVGPTASAAWLSHQGEAHYALASPAGGILVVTLPQHDTKASLTILE
LKTSSVMQRLAGWMPTAIRGEQSPGDLALSLAVRELEDDTFILALCQDHKLRMWSYRDQA
CLMEADMLEYMPACRGVKRSSGQGHRLRLAFSSTGLCLAIYLAVPSRGQFTVLQLVATDN
NRYSLDHISSLFSTQETLVDFALTSTDIWGLWLDDTNQTVVKYINFEHSTAGQWNQVFVQ
PAPEEEVHIGADQDPRETYLDMLFSPLRFTASALVKALQIYRRGTERITDLPWETLKKEV
TVAVEKELQSSVTEFEFSQEEYRQLQVEFWSKFYTCCLQYQEALATPLGLLLNPHTHMVC
VLKKGFVSFLVPCFAVEHLYLSFDEYLFSEEETPVAEDPEVGRDVLQLVQCLRLVSDAVP
GDMAYEMEKALEHLQSPERAAEMVLENLLANDNENVIEDIHNKLQDVRNPLAAMAVLIRE
MDLETDSEPGEGSLTIAGQSLSWRISLSQLYGSSVAVAVVCQAVCQMAMTRALFCRDLLI
LQQLYLRQGDNVFPGGGSQLQQDLIPRSSQLLSSYYLLKHITQSLTTTVPLDIIDANLQH
LSVLELSDSPAMASNRSVRSPQTVVELFYQSVARKAIITQIYSKQHSLSPGTALLHWPHM
VSSVVTLLAQQLWPNNLGFQFPECLMGNCQYAQLQEYVRLIGPWCQVNVGSCRFMLGQCY
LANGEGQKALQCFQEAAVEVEREEFLLRLTGAKEKAAAAPRLQYYNKVLRLLEDVGLPEL
VIHLATLAITEAVNDPRSQAALWTRIFKHHLDLGHNSQAYEALTQNPDSSSQLDCLRQLV
VVLCERSQLQDLVQFSYVNLHDEVVSIIESRARAVDLMSHNYYELLYAFHINRHNYRKAG
TVMFEYGMRLGREVRTQLGLQKQVNCCLASLNCLRLIRSDYAWIVQPTSGAVYVRPAASP
KRNYDGEFTTGPVSGQIDILELKDLQKEYALARSRLTLAQHHPPSAAIAGSASAVEMVSL
LVQSGLFDCALSLCQTFKLSLTSVFEGLAFKCIKLQYGGEEDQNEAWNWLAANQLCTITT
KESSATDEAWRLLASYLEKHPTQNAQHHRCVINKLLSHGVPLPDWLVNAYKGVDAAALLR
LYLNYDLLEAAAGLVLEYVDALLGKGHQYFGIERPLSATAPLVWLPYTSIDQLLQSLNET
QTNARMYKKLQDKLNDYHKLVDQTTRRRLQAQ
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaaggccagaagagaaggcggtacatttccttgttaatcccacaacgcagtgcg
gggaagatggcggcggttttagaaaggagtttcatagaaataagtgggtttgagagggaa
accctaccaacattccgggaaataactgtaaacctaggtctgaatgctcttcctggcagt
gtgatatacccagacagcgcaggaggctttcactatgagggaagtggaaaactcctgtcc
atcacaagcaacagattcatacactggtccacctccggggacacagtgcagctggtggag
cagtctctggacaccaacctactgaacaatgctgttaaactcaagatcacacactgccct
ctgctgcccggaggcgtacacgtccaggagaccctcaacaatgtcaccatcctcatcgtc
accaaccagactgtgcaccggttggtgctgccacaccccacacgcatgtaccgcagcgag
ctggtgacagagctccagatgcagtccatatttacagacgtggggaaaatgagtctgcag
gacccggcccacagcgcagtcatccccagccctgtgggccagacagtaggccccaccgcc
tcagcagcctggctcagccaccagggagaggcccattacgcccttgcatcacctgcaggg
ggtatcctggtcgtcacactgccccaacacgacacaaaggccagcttgaccattctggag
ctgaagacaagctctgtgatgcagagactggctggctggatgccaactgccatcagaggt
gagcagagccctggggacctggccctgagtctggctgtgagggaactggaggacgacacc
ttcatcttggctctgtgtcaggaccataaactacgcatgtggtcctatagggaccaggca
tgtctgatggaggctgacatgttggagtacatgccagcgtgccggggggtgaagcgttcc
tcaggacagggccatcggctgcggctagccttctcctccacggggctgtgtctggccatc
tacctggccgtaccttccaggggacagttcactgtgctgcagctggtggccacagacaac
aaccgctacagcctggaccacatctcctcactgttttccacacaggagacactggtggac
tttgctctcacttctacggacatctggggcctgtggctggacgataccaaccaaaccgtg
gtgaaatacatcaactttgaacattccacggcaggtcagtggaaccaggtctttgtgcag
cctgcccctgaggaagaggtccacatcggagcagaccaggaccccagggagacctacctg
gacatgctcttctcccccctgagattcactgcctctgctctagtcaaagccctacagatt
tacaggagaggcacagagcgaatcactgatctcccctgggagaccctcaagaaagaggtg
acggtggctgtggagaaggagctgcagagcagtgtgacagagtttgagttcagccaggag
gagtacaggcagctacaggtggagttctggtccaagttctatacctgctgtctacagtac
caggaggctctggccacaccgctgggcctgctgctcaacccacatacacacatggtctgt
gtgctgaagaagggctttgtgtcattcctggtgccctgctttgctgtggagcacctgtac
ctgtcttttgatgagtacctgttctcagaggaagagacacccgtggctgaagacccggag
gttggtcgtgacgtgctgcagctggtgcagtgtctgaggctggtgagtgacgcggtgccg
ggggacatggcctatgagatggagaaagccctggaacatctccagtcacctgagagggct
gcggagatggtgctggagaacttactggccaacgacaatgagaatgtgatcgaggacatc
cataacaaactacaggatgtccgtaaccctttggcagccatggccgtgctgatcagagag
atggacctggagactgactcggagccaggagaggggtctctcaccatagcaggccagtcc
ctgtcgtggcggatcagtctgtcccagctgtatggtagcagtgtggcggtggctgtggtg
tgtcaggctgtctgtcagatggccatgaccagagccctgttctgtagggacctgctcata
ctgcagcagctctacctacgtcaaggagacaatgtgttcccgggtggagggtctcagcta
caacaggacctgatcccccgctcctctcagcttctctcctcctactatctcctcaaacac
atcacccagagcctgaccaccaccgtgcctcttgacatcatagatgccaacctgcagcac
ctgtcagtcctggagctgtctgattctccagctatggccagcaacagatcagtccggagc
ccccagacggtggtggagctgttctaccagagcgtagcgcggaaggccatcattacccaa
atctactcaaagcagcacagcctctccccgggcacagccctgctccactggccccacatg
gtctccagcgtggtcaccctgctggctcagcaactctggcccaacaaccttggcttccag
ttccctgagtgtctgatgggcaactgccagtacgcacaactacaggagtatgtgcgtctc
attgggccgtggtgtcaggttaacgtgggctcctgccgcttcatgctgggccaatgttac
ctggccaatggagagggacagaaggcactacagtgtttccaggaggcggcagtggaggtg
gagagggaggagtttcttctgagattgacaggagccaaggagaaagctgcggctgcaccg
agactacagtactacaacaaggtgctgcggttgctggaggacgttggtctgccagagctg
gtcatccatctagccactctggccatcacggaggccgtcaatgaccccaggagtcaggct
gccctgtggacccgcatcttcaagcatcacctggacctaggacacaacagccaagcctac
gaagccctcacacagaaccctgactccagcagccagttagactgtttgcgtcagcttgtt
gtggttctgtgtgagcgttctcaacttcaggacctggtccagttctcctacgtcaacctg
cacgatgaggtggttagcatcatagagtccagagccagagcagtggacctgatgtcccac
aactactacgagctgctctacgccttccacatcaacagacacaactacaggaaagcgggt
acggtgatgtttgagtacggcatgcgtctgggccgggaggtgaggacacagctgggtcta
cagaaacaggtcaactgttgcctggcctccctcaactgtctacggctcatcagatctgac
tacgcctggattgtccaacccacctctggagcggtgtatgtgaggcccgctgcatcacca
aagaggaactacgatggagagtttactactggtccagtgagtggtcagatagacatcctg
gagctgaaggaccttcagaaggagtacgccctggctcgtagccgcctcaccctggctcag
catcatccaccctctgctgccattgcaggcagcgcctctgcagtggagatggtgtcccta
ctggtccaatcaggactgttcgactgtgccctctctctctgccagaccttcaaactctcc
ctcacttcagtcttcgagggacttgccttcaagtgtataaagttacagtacggtggagag
gaggatcagaatgaagcctggaactggctggctgccaatcagctgtgtaccatcacaacc
aaagagtcaagtgcgacagatgaggcgtggcgccttctggcctcttacctggagaagcat
cctactcagaatgctcagcaccatcgctgtgtcatcaacaagctgctgtcacacggtgta
ccactgcccgactggctggtcaacgcctacaagggggtagatgctgcagcgttgttacgg
ctctacctgaactacgacctgctggaggcagcagctgggctggtgttggagtatgtagat
gccctcctggggaagggacaccagtactttggcatcgagaggcccctctcagccacagcg
ccgttggtgtggctcccatacacatccatcgaccagctcctccagtcgctcaacgagacc
cagaccaacgccagaatgtacaagaaactgcaggacaagctgaatgactaccacaaactg
gtggaccagacgacgaggagaaggctccaggcccagtag
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integrated database retrieval system
