Salmo salar (Atlantic salmon): 106561557
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Entry
106561557 CDS
T04363
Symbol
poc1b
Name
(RefSeq) POC1 centriolar protein B
KO
K16482
centriolar protein POC1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106561557 (poc1b)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sasa03037
]
106561557 (poc1b)
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
106561557 (poc1b)
Cilium and associated proteins [BR:
sasa03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
106561557 (poc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
WD40_Gbeta
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_EML
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_Aladin
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
Beta-prop_IP5PC_F
Beta-prop_HPS5
Beta-prop_NWD2_C
Beta-prop_DCAF4
Beta-prop_NUP159_NUP214
Ge1_WD40
Beta-prop_Nup120_160
eIF2A
Beta-prop_IFT122_2nd
Tricorn_2nd
Beta-prop_WDR75_2nd
Cytochrom_D1
Beta-prop_ACSF4
TolB_like
WD40_like
DUF6986
THSD1_N
HAT
Motif
Other DBs
NCBI-GeneID:
106561557
NCBI-ProteinID:
XP_013981126
UniProt:
A0A1S3KQZ2
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Position
ssa10:103677333..103746798
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AA seq
510 aa
AA seq
DB search
MASVMEDPTLERHFKGHKDAVTCADFNSKHKQLASGSADKTLMIWNLNPKARAFRFFGHK
DVITGVQFSPAGDLVVSASQDKTVRLWTPSIKGESMVFKAHTATVRSVSFSHDGQRLVTA
SDDKSVKVWSVHRQRFVYSLNQHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSTKQCIN
CFTEYGGSATFVDFNTSGTCIASSGADNTLKIWDIRTNKLLQHYQVHSAGINCFSFHPSG
NYLISGSSDSTVKILDLLEGRLIYTLHGHKGPVLTVAFSRGGDFFASGGCDAQVLMWKTN
FDYFDYREVLSRHSQRVTPDPPPHLTDIYPRGPHLHSAQSGAIEISPMVADTQTTAPAVI
EVGQALYTATTAVNGHANNLPARRIASTSLNPNEDCHSSGQGSTSGSQSGQMGGRREEGE
QGMTFPLEMRSDLPMNFSSTLERIVQQLDVLTQTVSVLEERLTLTEDKLKECLFNQSQIL
LQVRGEEKDRRRERVEEEREGESGSPVASA
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagttatggaggaccccaccctcgagcgacacttcaagggccacaaagatgct
gtcacctgtgcagacttcaattccaaacacaaacagctggcctcagggtctgcagataag
actctgatgatttggaatctgaaccctaaggccagggcgttccgtttttttggacacaaa
gatgtcatcacaggggtccagttctcccctgcaggagatctggtcgtctctgcgtcccag
gacaagactgtacggctgtggacgcccagcattaaaggagagtcgatggtgttcaaagcc
cacacggctacagtacgcagtgtcagcttttctcacgacggccagaggctggtgactgcg
tcagacgacaagtctgtcaaggtgtggagtgtccacagacaacgttttgtctactcactc
aaccagcacaccaactgggtccgctgcgccaggttttctcctgacggccgtctaattgcc
tcctgtggcgacgaccgcacagtgcgactgtgggacacctccaccaaacagtgcatcaac
tgcttcacagagtatggaggatcagcaacatttgtagacttcaacaccagtggcacctgc
atagcatcctctggagcagacaacacgctgaagatctgggacatacggacaaacaaactg
ctccagcattaccaagtccacagtgcagggatcaattgcttttccttccacccgtctgga
aactacctgatcagtggctccagtgacagcacagtgaagatcctggacctgctggaggga
cgcctcatctacaccctccacggacacaagggtcctgtcctgacggtggccttctccagg
ggaggagacttcttcgcctcagggggttgtgatgctcaggttttaatgtggaagaccaac
tttgattattttgactaccgtgaggtcctgagcagacacagccagcgggtcacccctgac
ccccctcctcacctgacagacatctacccccgaggaccacacctccactccgcccagtct
ggggctatagagatcagtcccatggtggcagacacccagaccactgccccggctgtcata
gaggtgggccaggccctctacacagccactacggctgtcaacggccatgcaaacaatttg
ccagcacggcggattgccagtaccagcctcaaccccaatgaagactgccacagtagtgga
cagggttcgacatctgggtcccagtccgggcagatgggaggcaggagggaggagggggaa
caggggatgacgttccctctggagatgcgctcagacctccccatgaacttcagcagcacc
ctggaacgcattgtccagcagcttgacgtcctcactcagactgtctctgtgttggaagaa
cgtctcaccctgacagaggacaaactgaaggagtgtttattcaaccagagtcagatcctg
ctgcaggtgcgaggggaggagaaggaccgaaggagagagagggtggaggaagagagggaa
ggtgagagcggatcccctgtcgcctcagcctaa
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