KEGG   Salmo salar (Atlantic salmon): 106561557
Entry
106561557         CDS       T04363                                 
Symbol
poc1b
Name
(RefSeq) POC1 centriolar protein B
  KO
K16482  centriolar protein POC1
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sasa03036]
    106561557 (poc1b)
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:sasa03037]
    106561557 (poc1b)
Chromosome and associated proteins [BR:sasa03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    106561557 (poc1b)
Cilium and associated proteins [BR:sasa03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   106561557 (poc1b)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 EIF3I WDR55 WD40_Gbeta Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st NBCH_WD40 WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_EML ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_Aladin Beta-prop_SCAP WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_WDR41 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 Beta-prop_IP5PC_F Beta-prop_HPS5 Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_NUP159_NUP214 Ge1_WD40 Beta-prop_Nup120_160 eIF2A Beta-prop_IFT122_2nd Tricorn_2nd Beta-prop_WDR75_2nd Cytochrom_D1 Beta-prop_ACSF4 TolB_like WD40_like DUF6986 THSD1_N HAT
Other DBs
NCBI-GeneID: 106561557
NCBI-ProteinID: XP_013981126
UniProt: A0A1S3KQZ2
LinkDB
Position
ssa10:103677333..103746798
AA seq 510 aa
MASVMEDPTLERHFKGHKDAVTCADFNSKHKQLASGSADKTLMIWNLNPKARAFRFFGHK
DVITGVQFSPAGDLVVSASQDKTVRLWTPSIKGESMVFKAHTATVRSVSFSHDGQRLVTA
SDDKSVKVWSVHRQRFVYSLNQHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSTKQCIN
CFTEYGGSATFVDFNTSGTCIASSGADNTLKIWDIRTNKLLQHYQVHSAGINCFSFHPSG
NYLISGSSDSTVKILDLLEGRLIYTLHGHKGPVLTVAFSRGGDFFASGGCDAQVLMWKTN
FDYFDYREVLSRHSQRVTPDPPPHLTDIYPRGPHLHSAQSGAIEISPMVADTQTTAPAVI
EVGQALYTATTAVNGHANNLPARRIASTSLNPNEDCHSSGQGSTSGSQSGQMGGRREEGE
QGMTFPLEMRSDLPMNFSSTLERIVQQLDVLTQTVSVLEERLTLTEDKLKECLFNQSQIL
LQVRGEEKDRRRERVEEEREGESGSPVASA
NT seq 1533 nt   +upstreamnt  +downstreamnt
atggcatcagttatggaggaccccaccctcgagcgacacttcaagggccacaaagatgct
gtcacctgtgcagacttcaattccaaacacaaacagctggcctcagggtctgcagataag
actctgatgatttggaatctgaaccctaaggccagggcgttccgtttttttggacacaaa
gatgtcatcacaggggtccagttctcccctgcaggagatctggtcgtctctgcgtcccag
gacaagactgtacggctgtggacgcccagcattaaaggagagtcgatggtgttcaaagcc
cacacggctacagtacgcagtgtcagcttttctcacgacggccagaggctggtgactgcg
tcagacgacaagtctgtcaaggtgtggagtgtccacagacaacgttttgtctactcactc
aaccagcacaccaactgggtccgctgcgccaggttttctcctgacggccgtctaattgcc
tcctgtggcgacgaccgcacagtgcgactgtgggacacctccaccaaacagtgcatcaac
tgcttcacagagtatggaggatcagcaacatttgtagacttcaacaccagtggcacctgc
atagcatcctctggagcagacaacacgctgaagatctgggacatacggacaaacaaactg
ctccagcattaccaagtccacagtgcagggatcaattgcttttccttccacccgtctgga
aactacctgatcagtggctccagtgacagcacagtgaagatcctggacctgctggaggga
cgcctcatctacaccctccacggacacaagggtcctgtcctgacggtggccttctccagg
ggaggagacttcttcgcctcagggggttgtgatgctcaggttttaatgtggaagaccaac
tttgattattttgactaccgtgaggtcctgagcagacacagccagcgggtcacccctgac
ccccctcctcacctgacagacatctacccccgaggaccacacctccactccgcccagtct
ggggctatagagatcagtcccatggtggcagacacccagaccactgccccggctgtcata
gaggtgggccaggccctctacacagccactacggctgtcaacggccatgcaaacaatttg
ccagcacggcggattgccagtaccagcctcaaccccaatgaagactgccacagtagtgga
cagggttcgacatctgggtcccagtccgggcagatgggaggcaggagggaggagggggaa
caggggatgacgttccctctggagatgcgctcagacctccccatgaacttcagcagcacc
ctggaacgcattgtccagcagcttgacgtcctcactcagactgtctctgtgttggaagaa
cgtctcaccctgacagaggacaaactgaaggagtgtttattcaaccagagtcagatcctg
ctgcaggtgcgaggggaggagaaggaccgaaggagagagagggtggaggaagagagggaa
ggtgagagcggatcccctgtcgcctcagcctaa

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