Salmo salar (Atlantic salmon): 106561586
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Entry
106561586 CDS
T04363
Symbol
cercam
Name
(RefSeq) cerebral endothelial cell adhesion molecule
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa00310
Lysine degradation
sasa00514
Other types of O-glycan biosynthesis
sasa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
106561586 (cercam)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
106561586 (cercam)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sasa01003
]
106561586 (cercam)
Enzymes [BR:
sasa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
106561586 (cercam)
Glycosyltransferases [BR:
sasa01003
]
O-Glycan biosynthesis
O-linked Gal type
106561586 (cercam)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Anp1
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
106561586
NCBI-ProteinID:
XP_013981166
UniProt:
A0A1S3KR32
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Position
ssa01:complement(110581882..110596948)
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AA seq
591 aa
AA seq
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MFLWVLVLVAFVSRTVCYFSEEKYQEESKIQQPTIIIAIIARNAAHSLPYYLGALERLNY
PKNRISVWAATDHNADNTTAVLKEWLTVMQKFYHYVEWRPMEHPTSYPGEMGPKYWSNGR
YEYLMKLKQAALNFAKQRWADYIMYADTDNILTNPETLNLLIAENKSVVAPMLDSQGAYS
NYWCGITPQGYYRRTAEYFPTRHRHRLGCYPVPMVHSTFLLDMRKTGMKKLAFHPPHQDY
SWPFDDIIVFAFSCRVSEVQMYLCNKVRYGYLNVPAKPHHTIEDDSINFSHLILEAMIDG
PSMAPSKYVSLFPKRRDLMGFDEVYLINLRRRQDRRDRMLYSLNELEIDVKVVDAIDGGA
LNSSDIKILGVDILPGYYDPFSRRTLTKGEVGCFLSHYYIWKEMVDQQMDKALIFEDDVR
FQANFKRRVLRLMEEVEMVELDWDIIYLGRKQVTPSDEEEVVENVRNLVVAEYSYWTLSY
AISLQGAQKLLNAEPLSKMLPVDEFLPIMYDKHINEDYKSHFANRNLQAFSTRPLLVQPA
HYAGDPEWVSDTETSTLWDDDNVPTDWRGSHKTLKGAPQSDMLQATYKDEL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtttctttgggttttagttttagtggccttcgtttccagaacagtttgttatttttcg
gaggaaaaatatcaagaagaatcgaaaattcagcagccaacaattattattgcgatcatt
gctcggaacgcggcgcattctttgccatactacctcggagcgttggagaggctgaactat
cccaaaaaccgcatctctgtatgggcagctacagatcacaacgctgacaacactacagct
gttctgaaagaatggctgactgtcatgcaaaagttctatcactatgtggagtggaggccc
atggagcatcctacgtcttacccaggagagatggggcctaaatactggagcaatggcaga
tatgaatacctgatgaaactcaaacaggctgctctcaacttcgccaagcaacgctgggct
gactacataatgtatgcagacacagacaacatcttgaccaacccagagaccctcaacctc
ctgatagcagagaacaagtctgtggtcgcccccatgttggactcccagggagcctactct
aactactggtgcggcatcacgccacagggttactaccggcgtacggctgagtatttcccc
actagacaccgccaccggctgggctgctacccggtgcccatggtccactctaccttcctg
ctggacatgaggaagacgggcatgaagaagctggccttccacccccctcaccaggactac
tcctggcccttcgatgacatcattgtcttcgccttctcctgtcgcgtctcagaggtgcag
atgtacctgtgcaacaaggtgaggtatggatacctgaacgtcccagccaagcctcaccac
accatagaggacgacagcatcaacttcagccacctcatcctagaggccatgattgacggt
ccctccatggccccctctaaatatgtcagcctcttccccaaacggagagacctcatgggc
tttgatgaggtgtacctgatcaacctgcgtcggcgtcaggaccgtagggacaggatgctg
tactctctcaacgagctggagatagacgtcaaagtggtggacgccatagatggaggagct
ctgaacagcagtgatataaagatcctgggagtggacatactgcctggttactatgaccca
ttctctcgccgcaccctgaccaaaggagaggtgggatgcttcctcagccactattacatc
tggaaggagatggtagaccagcagatggataaggctctgatcttcgaggacgacgtgcgt
ttccaggccaacttcaagcggcgcgtgctccgtctgatggaggaggtggagatggtggaa
ctggactgggacatcatttacctgggccgtaagcaggtgacgccgagtgacgaggaggag
gtggtggagaacgtgaggaacctagtggtagcagaatattcctactggaccctgtcctac
gccatctctctccagggggcccagaagctgctcaacgctgaacccctctccaagatgctg
cccgtcgacgagttcctacctattatgtacgacaaacacatcaatgaggactacaagtct
cacttcgctaaccgtaacctgcaggcgttctctacgcgccccctactggtgcaaccggcc
cactatgctggggaccccgagtgggtgagcgacacggagacctccacgctgtgggacgac
gacaacgtaccaacagactggaggggttcccacaaaaccctgaagggggcacctcaatcc
gacatgctgcaggcaacgtataaggatgagctctag
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