Salmo salar (Atlantic salmon): 106561621
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Entry
106561621 CDS
T04363
Name
(RefSeq) spermatid perinuclear RNA-binding protein-like
KO
K13200
spermatid perinuclear RNA-binding protein
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
106561621
Spliceosome [BR:
sasa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
106561621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_C
DZF_N
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
106561621
NCBI-ProteinID:
XP_013981225
UniProt:
A0A1S3KRK8
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Position
ssa01:110818595..110934736
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AA seq
761 aa
AA seq
DB search
MVRTHTHGTGQGVNRAEQTGLLEDMLPGQTFVWPSVEAERSFRSFGNDDRHVMAKHSTIY
PSSSELEAVQTLVSTVEGALKHVSDWIDQSNVQSVQSNSQADAAAGQTDGQPNPTDSTMP
EDGSADHGDDLNDDPDVSPSASPDDCTDSSSSREPGGGVLCGVMRIGLVAKGLLIKEDMD
LELVLMCREKPTDALLCTVCDNLPLQIQKLTEEKYEVQRCVPEAAILVCSSTEPKLTLKV
TLTSPQMRKDSDTDEQVEGVELTDPADMLDRHRCLVALAALRHAKWFQARVNGLKSCVII
LRILRDMCNRLPAWEPLKGWPLELICEKAIATCNRPLGAGEALRRVMECLASGILLPGGP
GLHDPCEKELTNTLTAMTDEEAEAITYSAQHALRLMAFGHIYKVLEMDPLPSSKPSQKYP
WSDKEGSGLKRPYEDGPTDDKDLIKKMKRNLRKVLDSKAIDTNQPMNALMRLNQIRPGLQ
YKLLSQSGPVHAPVFTMSVDLDSTVYEASGSSKKTAKLHVAVKVLQAMGYPTGFDADLDC
SADEKSDGEGKSESSTHSSNNTAHSDNSNTLEVRTQGPILTASGKNPVMELNEKRRGLKY
ELISESGGSHDKRFVMEVEVDSQKFRGAGPNKKVAKASAALAALEKLFSGPNAAANNKKK
KIIPQHATKGALAAAAAASAVAAQVARGRGRAAALTRGAFVSAAAPGYTQIPGTCFGTPY
GYSAAAAPAYGGLFIDNPFYQPRTIAPFIIHLGPQDLFSDF
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggtgagaacacacacacacggcacagggcagggtgtgaacagagcagagcagacaggg
ctgttagaggatatgttacctgggcagacgtttgtttggccatccgttgaagctgagagg
tccttccgttcgttcggtaatgatgaccgtcacgtcatggccaaacactccaccatctac
ccatcgtcgtctgaactggaggcggtccagaccctggtgtccaccgtggagggtgccctc
aaacacgtctctgattggatagaccagagcaatgtccaatcggtgcagagtaacagccag
gcagacgcagcagccggccagacagacggccagccgaaccccacagacagcacaatgccc
gaggacggtagtgctgaccatggcgacgaccttaacgacgaccccgacgttagtcccagc
gccagcccagatgactgcacagacagcagcagcagcagggagcccggtggaggtgtgctg
tgtggggtgatgaggatcggcctggtggctaaagggctgctcatcaaagaggacatggac
ctggagctggtgctgatgtgtagagagaaacccacagatgcactgctgtgcactgtctgt
gataacctgcccctgcagatacaaaagttaaccgaagagaagtatgaggtgcagcgctgt
gtgccagaggcagccattttggtgtgtagttcgacagagccaaaactcaccctgaaggtc
accctcacctccccgcagatgagaaaggacagtgacacggacgaacaagtggagggtgtt
gagctgacagaccctgcagacatgctggacaggcacagatgcctggtggccctggcggct
ctgcgacatgccaaatggttccaggccagagtaaacgggttgaagtcgtgtgtcatcatc
ctcaggatcctgagagacatgtgcaatagactaccagcctgggagccgctgaaaggatgg
cccctggagctgatctgtgagaaggccatagccacgtgtaaccggccgctgggtgcaggg
gaggccctccgtagggtcatggagtgtctcgcctcaggaatcctccttccaggaggacca
gggttacacgacccatgtgagaaggagctgaccaacaccctaacggccatgacagacgag
gaggcagaggccatcacatacagcgcacagcacgccctgagactgatggcgttcggtcac
atctacaaggtgctggagatggaccctctcccctctagtaaaccctcccagaagtaccca
tggtcagacaaggagggctcagggctgaagaggccctacgaggatgggcccacggacgac
aaagacctcatcaagaagatgaagaggaacctgaggaaagtcctcgacagcaaagcaata
gacaccaaccaaccaatgaatgctctgatgcgtctgaatcagatacgtccaggtctgcag
tacaagctgctgtcccagtccggcccggtccacgctcctgtcttcaccatgtctgtagac
ctagacagcaccgtctacgaagcctcaggctcctccaagaagaccgccaagctgcatgtc
gctgtcaaggttctgcaggcgatgggttaccccacagggttcgatgcggacctggactgc
agtgcagacgagaagtcggacggagaggggaagagcgaatcatcgacacactcaagcaat
aacacagcacactcagacaactcaaatacactggaggtccgaactcagggtcctattctg
acggccagtggtaagaaccccgtcatggagctgaatgagaagcgcaggggtctgaagtat
gagctcatatcagagagcgggggcagccacgacaaacgcttcgtcatggaggtggaggtg
gatagtcagaagttccgcggggcggggcctaataagaaggtagcgaaggcttcggctgcg
ttggctgctctagagaaactcttctctggtcccaacgccgctgccaacaacaagaagaag
aagatcatcccacaacatgccactaaaggagccctagctgcagcagctgcagcctcagca
gtagcagcccaggtggccagagggagaggtagagcggcagccctaaccagaggagccttc
gtcagcgctgccgcaccaggatacacacagataccaggtacatgcttcgggactccatat
ggatacagcgctgcagccgccccagcctacggtggtcttttcattgacaatcctttttac
cagcctcggaccatcgcaccatttattattcatttgggtcctcaagatctcttctctgac
ttctag
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