Salmo salar (Atlantic salmon): 106561714
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Entry
106561714 CDS
T04363
Symbol
CAPR1, Caprin-1
Name
(RefSeq) caprin-1-like
KO
K18743
caprin-1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106561714 (CAPR1)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
106561714 (CAPR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
Fes1
Motif
Other DBs
NCBI-GeneID:
106561714
NCBI-ProteinID:
XP_013981403
UniProt:
A0A1S3KRS7
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All DBs
Position
ssa10:complement(109860096..109895431)
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AA seq
841 aa
AA seq
DB search
MELKAVGWNLKMPSAMNGNRTVQSASPDGGSAPGQITLGGGQSSGAQTEAMKQVLGVVDK
KVRNMEKKKGKLDDYQSKKNKGERLNRDQLDALTKYQEVTNNLEFARELQKSFLSLGQDI
QKAVKKAARREQLQREESEQKRLKTILELQFLLDRLGEDSVRQELRQGAASVDTPSLLTD
TELTALDELYKLVGPEPDQNTRFTDQYEEASQHLMDLLEGKDKAVAGTTYKALKDSLDRV
LLSGYFDQAQSHQNGVCEEAEEQAVDPEGEIVEEYIEPIEVEATEFVNRQFILDTTYNDK
EQGDEWTTETEAVSTILQQPVQSAPPPITTEAHPLNGATPPGTPPADPVVRKQEVQNLLS
QMQGPYNFMQDSMLEFDGQPIDPAIVSAQPIDPAIVSAQPIDPAIVSAQPIDPAIISAQP
IVSAQPIDPAIVSAQPIDPAIVSAQPIDPAIVSAQPIDPAIVSAQPIDPAIVSAQPIDPA
IVSAQPIDPAIVWAQPIDPAIISAQPIVSAQPIDPAIVSAQPIDPAIVSAQPIDPAIVSA
QPMKPQPQNMDLPQMGCPPVHPESCLSPHTVPVQPESTQVPMVSPTPEVYSTPPPMYRSS
HTAEPRPQTDSIDTIQVSLSSEQPPASSQPQQVFQPVSPRPPHSSGINVNAAPFQSMQTV
FNLNAPVPPANETEALTQASQYQNSYSQQGFSSQSQQLPVEQTEMQTEQLQSGVGAFHSQ
DLSLPSQDLSQGQQLSQQGPGFGPGASRQAQSFYNSRGMTRGGPRNARGLTNGFRGYDSY
RSPFTNTPNSGYQQAQFNPPRDYSNGGNYQRGEGYNPNYKRGVGQGPRGVSRGGNAQAMR
S
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggagttgaaggctgttgggtggaatttgaagatgccctcagcaatgaatggtaacagg
acagtgcagtcggccagcccagatgggggatctgctcctggacagatcaccctgggcgga
gggcagtcctctggggcccagaccgaggcaatgaagcaagtcctgggcgtcgtcgacaag
aaagtccgcaacatggagaagaaaaagggcaagctggacgattatcaatctaagaagaat
aaaggggaacgtctcaaccgggaccaactggatgccctgaccaagtatcaggaagtgact
aataacctggagtttgccagggagttacagaagagctttctttcactgggacaagatatc
cagaaggcggtgaagaaggcagcgcgacgggaacagctccagagagaagagtctgagcag
aagaggctgaagactatcctggagctccagttcctcctggacaggctgggagaggacagt
gtgaggcaggagctgagacaaggggctgccagtgtagacacaccttcactcctcaccgac
acggagctcactgccctggacgagctctataaactagtgggaccagaaccagaccaaaac
accaggtttactgaccagtacgaggaggcttctcaacacctcatggatctgttggaggga
aaggacaaagctgtggcaggaactacgtacaaagctctgaaggacagcctggaccgagtg
ctgctaagcgggtactttgaccaagcccagtctcaccagaatggagtgtgtgaggaggcc
gaggagcaggccgtcgacccagagggcgaaatagttgaagagtacatagagcccattgag
gtggaagctacagagttcgttaacagacaattcattctagacaccacatacaacgacaag
gagcaaggagatgagtggaccactgaaacagaggcggtgagtaccatcctgcaacagcct
gtacagtctgcccctccccctatcaccacagaggcccaccccctgaacggggccacgccc
ccaggcacaccccctgcagacccggtggtcaggaagcaggaggtccagaacctgttgtca
cagatgcaggggccttacaacttcatgcaggactcaatgctggagtttgatgggcagccc
atcgacccagccatcgtctcggcccagcccatcgacccagccatcgtatcggcccaaccc
atcgacccagccatcgtatcggcccaacccatcgacccagccatcatatcggcccaaccc
atcgtatcggcccagcccatcgacccagccatcgtatcggcccagcccatcgacccagcc
atcgtatcggcccagcccatcgacccagccatcgtatcggcccagcccatcgacccagcc
atcgtatcggcccagcccatcgacccagccatcgtatcggcccagcccatcgacccagcc
atcgtctcggcccaacccatcgacccagccatcgtatgggcccagcccatcgacccagcc
atcatatcggcccaacccatcgtatcggcccagcccatcgacccagccatcgtctcggcc
caacccatcgacccagccatcgtatcggcccagcccatcgacccagccatcgtatcggcc
cagcccatgaagcctcaaccacagaacatggacctgcctcagatgggctgtcccccagtc
cacccagaatcctgcctctcaccacacactgttcctgtacagcctgagtccacacaagtc
cccatggtgtcccccacgcctgaggtctactccacgccgcctcccatgtaccgctcatca
cacacggcagaaccccgaccacagactgactccatcgacaccatccaggtgtccctgtcg
tcagagcagccccctgcctcttctcagccccagcaggtcttccagcctgtcagccccaga
cccccacacagctccggcatcaatgtcaacgcagcaccattccagtccatgcaaacagta
ttcaacctcaacgcccctgtcccgccagccaatgagacagaagccttgacccaggccagc
caataccagaacagctacagccaacagggcttcagcagccaatcacagcagctccctgtg
gagcagacggagatgcagacggaacagctgcagtctggagttggtgccttccactcccag
gacctatccctgcccagccaggacttgtcccaggggcagcagctcagccagcagggtccg
gggtttggccctggggccagtcgccaggcccagtccttctacaacagcagaggaatgacc
cgcggagggccacgtaatgcccgtggcctgaccaacggattcagaggttatgacagttac
cggtctcccttcaccaacactcctaactctggataccaacaggcccagttcaacccacct
cgggactactccaacggtggcaactaccagcggggggaaggttataatccgaactacaaa
cgtggagtgggtcagggacccagaggtgtgtctcgaggaggcaatgcccaggccatgagg
tcctga
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