Salmo salar (Atlantic salmon): 106561777
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Entry
106561777 CDS
T04363
Name
(RefSeq) DNA-binding protein RFX7-like
KO
K09175
DNA-binding protein RFX7
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106561777
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Other basic domains
RF-X
106561777
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX_DNA_binding
RFX5_N
Pox_D5
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
106561777
NCBI-ProteinID:
XP_013981490
UniProt:
A0A1S3KSB5
LinkDB
All DBs
Position
ssa10:112492181..112514212
Genome browser
AA seq
2327 aa
AA seq
DB search
MFCFPSLLPLILQQDVEKFTDIEKLYLYLKLPSGPSNDKRTENQRASTPGLCDQSGMSSS
RTQQMYAFNWIRNHLEEHPETSLPKQEVYDEYKSYCDSLAYHPLSAADFGKIMKHVFPNM
KARRLGMRGKSKYCYSGLRKKAFVHMPSLPNLDLQKSGDGCEPMEPSSGQSPSAEDEMRS
AACGLVCEWAQKVLSRQFDAVEDLARFLLNSHYIGTKSMAALTVMTGAPTGLKTPTPTSA
FVPTSEASSFQPQVKTLASPSVDAKQQLQRKIHKKQQEQKLQSPLPGEAQGQGQNQARRT
EASTPGPAIPCGSPALLSPQPTIGIVVAAVPSPITVQRSRQLMTSPSPVGSAEGKVMPTV
NFQVVTHTQSLTHRQSPKTPQNISASPVGDRLARHRYPQILPKPSATAAITLRSPPTLLI
TNSPMKTHHVIQPQLSSHVNVVKMTAISLAPSNTISTSSNSMVLRPASASAGVGTTTTFT
TIAALEEVQQQGQSQGGPPAPATPQCPAGRPGAPASNPTPIVAPEAIITDNNPGSNSDKR
STIQKSPGGSKGPERATKYRASSEPSLLVICSPGPERVTARTKSYPSSSSPPTSATNAAT
IRVEAKQDSNNNSSTASTCHQESPFYLTVVPSANQNAPNVSGKSSSSNGLSAVTLLSSID
SSSCASGSKSPRKRTGPGLDSSHVIPVKRVFISQQPLGVTFDPKPGITAAVKRVPARQGT
PARPESAPCRVTVKQRLVPTQILALSDLPVTNTEISSSSSQTVDVKPQSSSLLLVKREDQ
SSLTLSLSTVSSHTSSTEAPGTTTTTVTEQQQQALLQQITAGPVGAQQHSEASVSAMPVG
AQQHSEASVSVMPVGAQQHSVSAMPVGAQQHSVSAMPVGAQQHSVSAMPVGAQQHSVSAM
PVGAQQHSVSAMPVGAQQHSVSAMPVGAQQHSVSVMPVGAQQHSEASVSAMPVGAQQHSV
SVMPVGAQQHSEASVSAMPVGAQQHSVSVMPVGAQQHSVSAMPVGAQQHSEASVSAMPVG
AQQHSEASVSAMGNMNCTVLEESAAGHLVEQQKQTFIQTIAADHTEHQALDSTDQHQLSN
VMSQTSDSSDQLSGLHQEMLDFASSSSQHGSTMDYFSFNDDDMTQDSIVEELVQMEEQMK
LKGLQPLFSSCVDNISLQGQPGGPQGPILNTHHQGDSSSFYQSAHSSITPIQTPTPTPTL
TPTPTPTEMTLGGHRLTRESPYCHHSMAPITPVEVPLGGRHTPISSLSNCSSGIPPSPVE
CRNPFAFTPINSSMAGGYHDASVVSVSSSPIKPMQRPMATHPDKAKLEWINNRYNSSGTE
AIGGVGAGPGSGLSICNHSLGGLLPSYQDLVDDHFRKPHAFAVPGQSGQSFRVQSRQQDG
SHFGHLAPISPVQQQLTSVSTTPTNTATKQDESFAVPAPLDGKGGALSSGGGTFRCRSVS
PAVRQMNFSGTDTSTGTTTRLVVSQFSSPMTSQEILSILSNSQSVGGNLHSVAQRSQSVP
LNIMMQSVVEMQGIQGQNQSNATKITNVLLSKMDSDVNDTVRGLGINNLPSNYTARMNLT
QMLETQSQSQTAPGGFTAGGDGGGRGGNAHQSQLQAVSSSPASFELQQHGGYLTSTGGGG
GEMSFNQSQSGPGGEDVDLELQQIQELQEASGQLHPQLLQTQARLLQSPHPQLHIPQAQL
QRAQLQSAQLQSPQLQSPHPQLQSPQLQSAQLQSAQLQSPQLQSPQLQSAQLQSPQLQSP
HPQLQSPQLQSAQLQIPQLQSPQLQRPQLQRPQLQSPQLHIPQAQLQRAQLQRSQLQSPH
PQLQSPHPQLQSPQLQSPHTQLQSPHTQLQSPHTQLQSPHTQLQSPHTQLQSPQPQLQSP
HTQLQRPQLQIPQAQLQSPHPQLQGPNTQFQSPHPQLQNPQLQIPQAQLQRPQLQSPHAQ
LQSPQLQSPHAQLQSPHPQLQSPQAQSPQAQLQSPHPQLQSPQAQLQSPHPQLQSPQAQL
QSPHAQLQSPQLQIPQAQLQSPQLQSPHAQLQSPHPQLQSPHPQLQSPQAQLQSPHPQLQ
SPHPQLQSPQAQLQSPHAQLQIPQAQLQSPHAQLQSPQAQLQSPQAQLQSPHAQLQSPQA
QLQSPQLQSPHPQLQSPQAQLQSPHPQLQSPHPQLQSPQAQLQSPHPQLQIPQPQAQLQI
PQAQLQSPQAQLQSPQAQAGFQLLQPITTQQQQQQDEEDDAQQQLDFNNTVKDLLGDDGL
NVHAEGLNPSSQLVGQVASELDAAVASDFTNDIGLTSDLSSSIADLNTLDANLLFDPSNQ
QQEQYEDATLEELKNDPLFQQICSDTVNSSFDWLESKDQPTTVEMLG
NT seq
6984 nt
NT seq
+upstream
nt +downstream
nt
atgttttgtttcccctctctactacctctcattttacagcaagacgttgagaagtttaca
gacatcgaaaaactctacctctacttgaagttgccttctggtcccagcaatgataaaagg
actgagaaccagagagcctccactcctggactatgtgaccagagtggcatgtcgtccagt
cgaacacagcagatgtacgctttcaactggatccggaatcacctagaggagcatcctgag
acatcactgccaaagcaagaggtgtacgacgaatacaagagctactgtgacagtcttgcc
taccacccactgagtgctgcagactttggaaagatcatgaagcatgtctttcccaacatg
aaggctcgccgcctgggcatgagaggcaaatctaaatactgttatagtggactgaggaag
aaagcttttgttcacatgccttccctgcccaacctggacttacaaaaatcaggcgacggg
tgtgagccgatggagccgtcgtcgggccagtctcccagtgcagaggatgagatgcgctca
gcagcctgtggcttggtgtgtgagtgggctcagaaggtcctcagcagacaatttgatgcc
gtggaggatctggctcgcttcctgctcaacagtcattacataggaaccaagtctatggct
gccctcaccgtcatgactggggctcccacaggtctgaagactcccacgccaacctctgca
ttcgtgcccacgtccgaggcctcgtccttccagccgcaggtgaagacgctggcctctccc
tcagtggacgccaagcagcagctccagaggaagatccataagaaacagcaggagcagaag
ctccaatcccccctgcctggagaggcccagggacagggacagaaccaggccaggaggacc
gaggccagcaccccagggccagctatcccctgtggaagtcctgctctgctttcaccacaa
cctaccattggtattgtggtggcagccgtccccagccccatcacggtccagaggagcagg
cagctgatgacatcccctagtccggtggggtccgccgaggggaaggtaatgccaacggtc
aacttccaggtggtcacccacacccagtctctgacccacagacagtcacctaaaacgccc
cagaacatctcagccagccccgtgggagaccgcctggctaggcacaggtacccccagatt
ctccccaagccctctgccacggcggccatcaccttgcgttcgccccccaccctgctcatc
accaacagccccatgaagacccaccacgtgatccagccccagctcagttcccacgtcaac
gtggtcaagatgaccgccatctctctggcccctagcaacactatcagtaccagcagtaac
agtatggtcctcaggccagcttcagcctcggccggggtgggaaccaccaccacttttacc
accatcgctgccctagaggaggtccagcaacagggacagagccagggaggtcccccagcc
ccagctaccccacagtgtcctgcaggacgacctggcgctccagcctccaaccctactccc
atagtggctcctgaggccatcatcactgacaataacccgggctctaactcagataaacgg
agcaccatacagaagtcccccggtgggtccaagggtccagagagggccactaagtaccga
gcgtccagcgaaccctcgctcctggtcatatgctcaccaggacctgaaagagtgaccgcc
aggaccaaaagctacccttcttctagttcccctcccacctctgccaccaatgcagcgact
attagggtagaggccaagcaggacagcaataacaacagcagcaccgcatccacctgtcac
caagaaagtcctttttatctgactgttgtgccctcggccaatcagaacgctcctaacgtc
agcggaaagtcctcctcgtccaatggcttatcggctgttaccctattgtcttctatagac
tcctcctcctgtgcgtcaggttctaagagtccccggaagcgaaccggccctggtctggat
tcctcccacgtgatccctgtgaaacgtgtcttcatctcccagcaacctttaggtgtgacc
tttgaccccaaaccagggattaccgccgccgtcaagagggtcccagccagacaaggcacc
cccgcccgaccagagagcgccccatgtcgagtgacggtgaaacaacgcctagtgcccacg
cagatcctggcgctgtcagacttgcccgtcacgaacacggagatctcctcctcctcctct
cagactgtcgacgtgaagccccagtcctcctcgttgctgctagtgaaacgtgaagaccag
tcctctctaactctaagtctcagcactgtcagcagtcacaccagcagcactgaagcccct
ggtacgaccaccaccacagtgactgagcagcagcaacaggccttactacagcagatcaca
gcaggaccagtaggagcacagcaacactctgaggcctctgtctctgcgatgccagtagga
gcacagcaacactctgaggcctctgtttctgtgatgccagtaggagcacagcaacactct
gtctctgcgatgccagtaggagcacagcaacactctgtctctgcgatgccagtaggagca
cagcaacactctgtctctgcgatgccagtaggagcacagcaacactctgtctctgcgatg
ccagtaggagcacagcaacactctgtctctgcgatgccagtaggagcacagcaacactct
gtctctgcgatgccagtaggagcacagcaacactctgtctctgtgatgccagtaggagca
cagcaacactctgaggcctctgtctctgcgatgccagtaggagcacagcaacactctgtc
tctgtgatgccagtaggagcacagcaacactctgaggcctctgtctctgcgatgccagta
ggagcacagcaacactctgtctctgtgatgccagtaggagcacagcaacactctgtctct
gcgatgccagtaggagcacagcaacactctgaggcctctgtctctgcgatgccagtagga
gcacagcaacactctgaggcctctgtctctgcgatggggaacatgaattgcacagtgttg
gaagagtcagccgcaggacatctggtggagcagcagaaacagaccttcattcagactata
gcagcagaccacaccgagcaccaggccctggattccaccgaccaacaccaactctccaac
gtcatgtcccagacctcagactcctctgatcagttatctggtcttcatcaggagatgctg
gactttgcctcctcatcctcccagcacggctccaccatggactacttctcctttaacgat
gatgatatgacccaggacagcatagtagaggaactggttcagatggaagaacagatgaag
ctgaagggcctccagccgctgttcagtagctgtgtggataatatctctctccagggccag
cctgggggcccccaggggcccatcctcaacactcaccaccagggggatagctcttctttc
taccagtctgcccatagcagtattacccccatccagacccccaccccaacccccaccctg
actccaacccctacccccacggagatgactctcggcgggcacaggctgaccagagagagc
ccctactgccatcacagcatggcccctatcacgcccgtggaggtccctctaggaggccga
cacacccctataagctctctgtctaactgttctagcggcatcccgcccagcccggtggag
tgcaggaacccgtttgccttcacacctatcaactccagcatggcagggggttaccatgat
gcctccgtggtgtctgtctcctccagtcccatcaagcccatgcagagacccatggccact
cacccagataaggctaaactggagtggatcaacaaccgttacaacagtagtggtactgaa
gctattggaggagtcggagcagggccagggtctgggttatccatctgtaaccacagcctt
ggtggactcctgcctagttaccaggatctagtggacgatcacttccgtaagcctcacgcc
ttcgctgtcccgggtcaaagtggccagtctttccgggtccagtccagacagcaggacggc
agccattttggacatctcgcccccatctctccggtgcaacagcagttgaccagcgtatcg
accacacccaccaacacggcaaccaaacaggacgagagcttcgctgtgcccgcccctctt
gacggcaagggtggagccctgtcatcagggggcgggacgttccgttgccgtagcgtcagc
cccgccgtgcgtcagatgaacttcagcggtaccgacacaagcaccggcactaccactcga
ttggttgtctcgcagtttagttcccccatgacctcacaggaaatactcagcatcctgtcc
aacagccaatcggtgggcggcaacctccacagcgtggcccagcgcagccaatcggtgccc
ttaaacatcatgatgcagagcgttgtggagatgcaaggcatccagggacagaaccagagt
aatgccactaagatcaccaatgtcctcttgagtaagatggactctgacgtgaacgacact
gtgaggggcctgggcatcaacaacctcccttccaactataccgcccgcatgaacctcacc
cagatgctggagacccagtctcagagtcagactgcccctgggggcttcaccgctggagga
gatggaggaggaagaggagggaacgcccatcagtctcagctgcaggctgtcagctccagc
cctgcctctttcgagctccagcagcacgggggctacctcaccagtaccggaggaggcggg
ggggagatgagcttcaaccaatcacaatcaggccctggtggtgaggatgtggacctggag
ctacagcagatccaggagcttcaggaggcctcaggacagctccatccccagctactacaa
acccaggctaggctgctccagagtccccatccccagctccacattccccaggcccagctc
cagagggcccagctccagagtgcccagctccagagtccccagctccagagtccccacccc
cagctccagagtccccagctccagagtgcccagctccagagtgcccagctccagagtccc
cagctccagagtccccagctccagagtgcccagctccagagtccccagctccagagtccc
cacccccagctccagagtccccagctccagagtgcccagctccagattccccagctccag
agtccccagctccagagaccccagctccagagaccccagctccagagtccccagctccac
attccccaggcccagctccagagggcccagctccagagatcccagctccagagtccccac
ccccagctccagagtccccatccccagctccagagtccccagctccagagtccccacacc
cagctccagagtccccatacccagctccagagtccccacacccagctccagagtccccac
acccagctccagagtccccacacccagctccagagtccccaaccccagctccagagtccc
cacacccagctccagagaccccagctccagattccccaggcccagctccagagtccccac
ccccagctccagggtcccaacacccagttccagagtccccacccccagctccagaatccc
cagctccagattccccaggcccagctccagaggccccagctccagagtccccatgcccag
ctccagagtccccagctccagagtccccatgcccagctccagagtccccacccccagctc
cagagtccccaggcccagagtccccaggcccagctccagagtccccacccccagctccag
agtccccaggcccagctccagagtccccacccccagctccagagtccccaggcccagctc
cagagtccccatgcccagctccagagtccccagctccagattccccaggcccagctccag
agtccccagctccagagtccccatgcccagctccagagtccccacccccagctccagagt
ccccacccccagctccagagtccccaggcccagctccagagtccccacccccagctccag
agtccccacccccagctccagagtccccaggcccagctccagagtccccatgcccagctc
cagattccccaggcccagctccagagtccccatgcccagctccagagtccccaggcccag
ctccagagtccccaggcccagctccagagtccccatgcccagctccagagtccccaggcc
cagctccagagtccccagctccagagtccccacccccagctccagagtccccaggcccag
ctccagagtccccacccccagctccagagtccccacccccagctccagagtccccaggcc
cagctccagagtccccacccccagctccagattccccagccccaggcccagctccagatt
ccccaggcccagctccagagtccccaggcccagctccagagtccccaggcccaggccggg
ttccaactcctccagcccatcaccacccagcagcagcaacaacaggatgaagaagacgat
gcgcaacaacagctagacttcaacaacactgttaaagacctgttaggtgacgacggtctc
aacgtccacgctgaaggcctcaaccctagctctcagctggttggtcaggtggcctcggaa
ctcgacgccgctgtggcgtccgacttcaccaacgacatcgggctgacctccgacctctcc
agtagcatcgcagacctgaacacgttggacgccaacctgctgttcgatccgtccaatcag
cagcaagaacagtacgaagacgccacactggaagagctgaagaacgatcctctgtttcag
cagatatgtagtgatactgtgaactcctcgttcgactggctggagagcaaagaccagcct
actaccgtagagatgttgggctaa
DBGET
integrated database retrieval system