Salmo salar (Atlantic salmon): 106561875
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Entry
106561875 CDS
T04363
Name
(RefSeq) WD repeat-containing protein 43-like
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106561875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sasa03009
]
106561875
Ribosome biogenesis [BR:
sasa03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
106561875
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_THOC3
WD40
WD40_Prp19
Utp12
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
ANAPC4_WD40
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
EIF3I
Beta-prop_WDR41
Beta-prop_VPS8
Beta-prop_SPT8
Beta-prop_Aladin
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_RIG_2nd
WD40_2
Beta-prop_ACSF4
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_RSE1_2nd
Tricorn_2nd
Beta-prop_IP5PC_F
SGL
Motif
Other DBs
NCBI-GeneID:
106561875
NCBI-ProteinID:
XP_013981622
UniProt:
A0A1S3KSK4
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All DBs
Position
ssa11:complement(1095980..1146792)
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AA seq
637 aa
AA seq
DB search
MAADGGSFSLGLPCVFSPKSRQYLALCAQDGRLRIWNTDIKTLNQEYVPSAHLSATCTCI
SWGPCRKAKEGPQRKKRKSEAGQVENQVDLLALGTAAGSVIIYSTVKGALHCTLDGGHSG
GVNCVQWHPEDCLLYSGSDDTHIVEWDLQTGKARCKWKADRASVTSLCVSPDGKLLLSAG
HTIKMWDLETKEVYRKFTGHSTAVTTLRFATTRPPDSNGLYFISGAAHDRLLSVWQVRED
GKDKNSVVSFNLTDEPHHIDLFTSNSKEEAVRLAVVCRDGQLHLFEHFLNGPCKKPLSPL
CTVQITGVEDSPVPVPLLAAALTTDTHSLLLAYGNHLQPVMERVEVNTAERHVCLTRDVH
TTLSLTMATTVSKVKTPVANPKGKVLVPGLPGHQAPVKGSLGSEKRKGTDAKEMSIEERL
GKIQMSPEKGVKGAPSLQMDNFAVLLVQGLESKDANILNKVFQNRKDFFIKTTIARLPLP
AVLPLVEEITKRMQGHPYTAVLMVRWLKAVLMQHTSYLASLPDLVFQLGVLYHMIESRVK
MFHKLTKLHGKLYLLMTQVATSDSGNEVKDVDHTAKLVYEEESSDEDDASGDEGLPDEDS
DNWEEDETMDDEAEGMRMESKVNGDSDIEPGNESEEE
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgatggaggtagtttttcgttggggctaccctgtgttttttctccaaaatca
cgtcaataccttgctttatgtgctcaggatggcagacttcgtatttggaacacagatatt
aaaacacttaatcaagaatacgtgccttcagcccacttgagtgccacttgtacctgcata
tcttggggaccatgccgaaaggccaaggagggacctcaacggaagaagaggaaatcggag
gcaggacaggtggagaatcaggtggaccttttggctctgggcacggctgcgggcagcgtt
atcatctacagcacagtgaagggagcactgcactgtacactggacggaggtcacagtggc
ggggtgaactgtgtgcagtggcaccctgaggactgcctgctatacagtggctcagacgac
acacacatcgtagagtgggacctacagacgggcaaggcgcgctgtaagtggaaggctgat
cgtgcctccgtaaccagtctgtgtgtgagtccggatggcaagctgctgctctcagcggga
cataccatcaagatgtgggacctcgagaccaaggaggtgtaccggaagttcacaggtcac
tccacggctgtgactaccctgcgcttcgccaccacgcgccccccggatagtaacggcctc
tacttcatctccggcgcagcccacgacagactcctcagcgtgtggcaagttcgggaggac
ggcaaggacaagaactcggtggtgtccttcaacctgactgacgagcctcaccacatagac
ctcttcacctccaacagcaaggaagaggcggtgaggctagcggtggtgtgtagagacggc
cagcttcatctctttgagcattttttgaacgggccctgtaagaagcccctgtccccgttg
tgtacagtgcagataactggggtggaggacagccccgttcccgttcccctgttggccgcg
gccctcaccacagacacacacagcctgctgctggcctacggcaaccacttgcagcctgtc
atggaaagagtggaggtgaacacggcagagagacatgtttgcctgacccgtgatgtccac
accaccctctccctcaccatggcaaccacagtctccaaggtgaaaaccccagtagctaac
cccaagggcaaagttctagtccctggacttcccggtcaccaagcgccggtcaaaggatcc
ctgggatccgagaagagaaagggcacagatgccaaagagatgtcaatagaggagcgactg
ggcaagattcagatgtcacctgagaagggtgtcaagggggccccttctctgcagatggac
aactttgcggtgctgctggtgcagggtctggagagcaaggacgccaacatcctcaataaa
gtgtttcagaaccggaaggacttcttcataaagacaacgattgcacggttacccctacct
gccgtcttgccattggtggaggagatcaccaagagaatgcaagggcatccatacacggca
gtgctgatggtgcgatggctcaaggctgttctcatgcagcacacctcctacttagcctct
ttgccagacctggtgtttcagctgggagtgctgtaccacatgattgagagtagagtcaag
atgttccacaagctgaccaagctgcacggcaagctctatctgctcatgacacaggtggcg
acaagcgacagcggcaacgaagtcaaagacgtggaccacacggctaagcttgtctatgaa
gaggagtcctctgacgaagacgatgcttcaggtgacgaaggtcttccagatgaggattct
gataactgggaggaggatgagactatggatgatgaggcggaaggcatgaggatggaatca
aaagtgaatggcgattctgacatagaaccggggaacgagagcgaggaagagtga
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