Salmo salar (Atlantic salmon): 106561897
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Entry
106561897 CDS
T04363
Symbol
apc
Name
(RefSeq) APC, WNT signaling pathway regulator
KO
K02085
adenomatosis polyposis coli protein
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04310
Wnt signaling pathway
sasa04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
106561897 (apc)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
106561897 (apc)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sasa01009
]
106561897 (apc)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106561897 (apc)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sasa04812
]
106561897 (apc)
Protein phosphatases and associated proteins [BR:
sasa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106561897 (apc)
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
106561897 (apc)
Cytoskeleton proteins [BR:
sasa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
EB / APC
106561897 (apc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm_APC_u3
APC_basic
APC_r
EB1_binding
APC_rep
APC_u5
APC_u9
APC_N_CC
SAMP
Arm
APC_u14
APC_15aa
Suppressor_APC
APC_u13
APC_u15
ARM_ARMC5
Sec7-like_HUS
DUF5399
Motif
Other DBs
NCBI-GeneID:
106561897
NCBI-ProteinID:
XP_013981694
UniProt:
A0A1S3KSN6
LinkDB
All DBs
Position
ssa01:complement(112959982..113017404)
Genome browser
AA seq
2782 aa
AA seq
DB search
MAAASYDQLLKQVEILKMENSNLRQELEDNSNHLTKLETEASNMKEVLKHLQGSIEEETT
DSSEQINLLERLKEISLDPNSYPGVKLRPKLPSMQGSGSGRSGDSSPSPSPMGSFPRRGV
SNGGRDSAGYLEELEKERSVLMAELEKEEKEKDWYYAQLQNLTKRIDSLPLTENQFSLQT
DMTRRQLEYEARQIRAAMEEQLGTCQDMEKRAQVRVARIQQIEKDMLKLRQHLQSQSAEP
ESKHDQAGQSEGPQASGDSGGPSAEYSQGSSCRLDHDSASEISLGVGSYSVPRRLTSHLG
TKVEMVYSLLSMLGTHDKDDMSRTLLAMSSSQDSCIAMRQSGCLPLLIQLLHGNDKDSVL
LGNSRGSKEARARASAALHNIIHSQPDDKRGRREIRVLHLLEQIRVYCETCWEWQESHER
GVDQDKNPMPSPVEHQICPAVCVLMKLSFDEEHRHAMNELGGLQAIGELLQVDCEIYGLT
SDHYSVTLRRYAGMALTNLTFGDVANKATLCSMKGCMRAMVAQLKSESEDLQQVIASVLR
NLSWRADVNSKKILREVGSVRALMECALEVQKESTLKSVLSALWNLSAHCTENKADICAV
EGALAFLVSTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHL
KSHSLTIVSNACGTLWNLSARNAKDQEALWDMGAVSMLKNLIHSKHKMIAMGSAAALRNL
MANRPAKYKDANIMSPGSSLPSLHVRKQKALIEELDSQHLSETFDNIDNLSPKASHRGKP
SRHKQTVYSDYDGVSRSDGFSPNSVPVRPPYVNTPVLSSPSPRENPRGNIDSVRAERDRS
QDRDRPRGAPGGFHPDHDSKRMQMPATTAAQIAMVMEEVKSIHLLTGLDDRSPESPNQDP
HRTTAEHGHSNVYPYTKPDHSGRPCPMPKLEYRASNDSLNSVNSTDGYGKRGQMKPSVDS
YSEDDEGKCCVYRKYPADLAHKIHNANHMEDDDGEVDTPINYSLKYSDEQLNSGRQSPSQ
NERWARPKHMEEEMKRTDQRSMRSQSPGYPMYTEGNSEGEEKLKYKPRFVQTEMPQGFRS
RNANQQDQSNAGPTQGINKKMNNQTMCQSVDDYSDDKPTNYSERYSEEEQQDEQPTNYSM
KYNEEHHAEQPIDYSLKYSDSSSQKSMFSHSKSSSTQSSVKDNLSPDGSTSSMSSIKNAG
RQMQLHPSAQMRSGPTRPGQKNTICKPPTVNQETLQTYCVEDTPICFSRGSSLSSLSSEE
DEMEGCKRNVNATSNYPTLPISEKESTGSHTQEQRRTESQSSVQYVRMKPPRNSQVHGDG
SRHHKAVEFSSGAKSPSKSGAQTPKSPPEQYVQETPLMFSRCTSVSSLDSFESHSIASSI
QSELCSGMPSGIISPSDLPDSPGQTMPPSRSKTPPPPQNQHPPPMKHKKVPPPPPPRADM
APRHAAVHAAVQKVQVLPNNDALLHFATESTPEGFSCASSLSALSLDEPYIQKDELKIMP
SVHEDDQGIEAEHENDDTTEPPSQGKRETEKDILDDSDDDDIEILEACINSAMPTKSSRK
LKKQSPSNTTSRIPPPTARKPSQLPVYKLHPSQTRGQQKTVNFAHGEDMPRIYCVEGTPI
NFSTATSLSDLTIDSPPNELANAESRAPPRAEISSSQRRDTIPEGKCTEEKDAGVTSSTQ
AAGTENEGDDILAECISSAMPKGKIHKSFRVQKMYDQPLHPSASPVSLVQQEVEKKPTSP
VKPMPQSSEYRARMIKKPQPPFNFSSYPDKNKETKMQQTKMASRDFTDKPPNVERPRPGF
AFDSPQHYTPIEGTPYCFSRNDSLSSLDFEDEEPNLAKEKAELRKDKDQRKASTKNCGKP
SLRANRANLPQTAPTKPQQQNQAVFPQASKENMGPVPDEKQKFSIEDTPMCFSRNSSLSS
LSDIDQENNNKDLQPKEEDVTQVEAPTRPQASGYAPKAFHVEDTPVCFSRNSSLSSLSID
SEDDLLQECISSAMPKKKKQTARNKEGNDQADATEERSMDGILAEEPELILDLTDTHSPV
SEQALSPDSESFDWKAIQEGANSIVSSLHQAAASLSRQGSSDSDSILSLKSGISLGSPFH
LPLNSEDNKSASDKGRPRILKPGEKSTLEAKKKEKEEEAAKALKGGKKVYKSLITGKPRA
ITETPASLQQRQTAPTLPISRGRTMIHVPGVRSSSPSTSPVQKKPPARGPASVSKLPPTQ
GQSSSNSNRSIKPPAKSDPSPARDQPGSQSGSSKASSRSGSRDSTPSRPAQQSLTTRPMQ
SPGRSSVSPGRNGLGSSNKLSQLPRTASPSTSSTKSSGSGRMSYTSPGRQMGQQTQPKQT
GLTRSTSGIPRSESASKSLNQCGVTGTSKKQDLSRITSTKSSGSESDRSEKPALVRQSTF
IKEAPSPTLKRKLEESASFESLSPSSTSQSQTPVSSPSLPDMSLTLPYQGSQGSNWKKSP
QSQNSSENEDGKPQRGGKHDISRSHSESPSRLPNLNRTGTWKREKSKHSSSLPRVGTWKR
TGSSSSILSASSESSEKGKSEDERQPLSPAQRSPHGKDGNPLKGTWRKMKDSEISQSEGH
DSSSIDSNTMAMGHQMSPAVSKTEDVWVRIEDCPINSPRSVKSPTANTPPVIDSVLVKIP
SVDLLSSETHPKRSKNESVNARRLGPETNLNLFRSSESLDKKGPDLKPAQSIIPEAHELP
VAERTPFSSSNSSKHSSPSGAVAARVSPFNYTPSPRKSSADSATPPRPSQIPTPVSVTNS
AKKRESKGESAGESGSYIVTSV
NT seq
8349 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagcatcttatgatcagctgctgaagcaagtggagatactgaagatggagaac
tccaaccttcgacaagagcttgaggacaactcaaaccacttgaccaaactggagaccgaa
gcctccaatatgaaggaggtgctgaaacacctacagggaagcattgaagaagagactacc
gattcatccgaacaaatcaatctcctagaaagactgaaggaaattagcctggaccctaac
agttacccaggggtgaagctaagacctaagctgccctccatgcagggctcaggctctggg
cggtcaggggacagcagccccagtcctagccccatgggctccttccccaggagaggggtg
tccaatgggggccgagacagtgctggctacctggaagagctggagaaggagaggtctgta
ctgatggcggagctggagaaagaggagaaggagaaagactggtattacgcacagctccag
aacctcaccaagaggatcgacagcctgccactgactgagaatcaattctccctgcagact
gatatgacccgtaggcaactggagtatgaggcgaggcaaattagagccgccatggaggaa
cagctgggaacctgccaggatatggagaagagggcacaggtgagggtggctcgcattcag
cagattgagaaggacatgctgaagctccgacagcacttacagtcccagtctgcagaacca
gagagcaagcacgaccaggctggccagagtgaaggaccccaggcttcaggggacagtggt
gggccaagtgctgagtattctcagggttcaagctgtcgcctggatcacgactctgccagt
gaaataagtttgggtgtgggtagttactctgtgccccgccgactgaccagtcacctgggc
accaaggtggagatggtatattcccttctttcaatgctggggacccacgataaagatgac
atgtctcgcactctgcttgccatgtccagctctcaggacagctgcatcgccatgcgtcag
tctggctgccttcccttactcatccagctcctccacggcaacgacaaggactctgtgctg
ctggggaactcacggggaagcaaggaggcccgggcgagagccagcgccgcccttcataac
attatccactcccagcctgatgataagagaggtcgcagggagatcagagtgctgcacctc
ctggagcagatcagggtctactgtgagacctgctgggagtggcaggaaagccatgagaga
ggagtggaccaggacaaaaaccccatgccctctcccgtggagcatcagatctgcccagcg
gtgtgtgttcttatgaagctgtcctttgacgaagagcacaggcacgctatgaatgagctc
gggggcctgcaggctattggggagctgctccaagtggactgtgaaatctatggcctcacc
agcgaccactacagtgtcactctgaggagatacgctggcatggccctcaccaacctcacc
tttggggatgttgccaataaggcaacactgtgttccatgaagggatgcatgagggccatg
gtggctcagctgaagtctgagagtgaggatctacagcaggtgattgccagtgtgttgagg
aacctgtcctggcgggcggatgtgaacagtaagaagatcctccgcgaggtgggcagcgtc
agggctctgatggagtgtgcattggaggtacagaaggagtctactctgaagagtgtcctc
agtgccctgtggaacctgtcagctcactgcactgaaaacaaagctgatatctgtgctgtt
gagggggctttggccttcctggttagcactctgacgtaccgaagccaaaccaacaccctc
gccatcattgaaagtggaggaggcatcttgcgcaacgtgtctagtctcattgccacaaat
gaagatcacaggcaaatcctgagagagaacaactgtcttcagacactcctgcagcacctg
aagtctcacagcctgacaattgtgagcaacgcgtgcggcactctgtggaacctctctgcc
cgcaacgcaaaggaccaggaggccttgtgggacatgggtgctgtgagcatgctgaagaac
ctaatccactccaaacacaagatgatcgccatgggcagcgctgcagcactgaggaaccta
atggccaacaggcccgccaaatacaaggacgccaacatcatgtcgcctggatccagcctg
ccctctcttcacgtcaggaaacagaaagccttgatcgaggaactggactctcagcacctc
tctgagacatttgacaacattgacaatttaagccccaaggcttcccacaggggtaaacca
agcaggcacaagcagactgtctacagtgattacgatggtgtttctagatcggacgggttt
agccccaacagtgtgcctgtgcgccccccttacgtgaacacaccagttctgtcaagcccg
tcacccagagagaatccaagggggaacatagacagtgttagggctgagagggatcgaagc
caggacagagacagaccgaggggtgcacccgggggtttccacccagatcatgactctaag
agaatgcagatgcctgccacaacagctgctcagatcgccatggtgatggaggaggtgaaa
agcattcacttgctgactggtctggatgaccggtcaccagagagccctaatcaagaccct
caccgtaccactgcagaacatggtcattcaaatgtatatccctacactaagcccgatcac
tcgggcagaccttgtccaatgcccaagttagaatacagggcgtcaaacgacagtctcaac
agtgtcaacagcactgatggctatggcaaaagaggccagatgaagccatctgtggactct
tactctgaggatgatgaggggaagtgttgcgtctatagaaaatatcctgcagacctcgct
cacaagatccacaatgcaaaccacatggaagatgatgatggagaagttgacacacccatc
aattacagcctgaagtattctgacgagcagctgaactctggtcggcaaagtccaagccaa
aatgaaaggtgggctaggcctaagcacatggaggaggagatgaaacggacagatcagagg
tctatgcgatctcaaagcccaggctaccccatgtacacggagggaaacagtgagggtgag
gaaaaactgaagtacaagcccaggtttgtgcaaacagaaatgccacagggattcagatca
aggaacgccaatcaacaagatcaaagcaatgctggccccactcaaggaattaacaaaaag
atgaacaaccagactatgtgccagtctgtggatgattacagtgatgacaaaccaaccaat
tatagtgagcgatactcagaggaagaacaacaagatgagcagccgaccaattacagcatg
aagtacaacgaagaacatcacgcagaacaacccattgattacagtctgaaatattcagac
tcctcctcccaaaaatccatgtttagtcattcaaagtcatcctccactcagagctcggtg
aaagacaatctgagcccggatggttccacatcatccatgtcatccataaagaatgcagga
agacaaatgcagctccatccctcggctcaaatgagatcagggccaactcggccaggccag
aagaacacaatatgcaaaccccctaccgtcaatcaagagacactacagacgtactgtgtt
gaggacacacccatctgtttctcaaggggtagctctctgtcatccttgtcctcagaggag
gacgaaatggagggctgcaagaggaatgtaaatgctactagtaactacccaactcttccc
atctctgagaaagagtccactggcagtcacacacaagaacaacgcagaaccgagagccag
tcatctgtgcagtatgtccgaatgaagcctccaaggaatagtcaagttcatggagatgga
tccagacatcacaaagctgttgagttttcatctggagccaaatccccatccaaaagtggt
gcccagacccccaaaagccccccagaacagtatgtgcaggagacacctctcatgttcagc
agatgcacatctgtaagctctctcgacagctttgagagccattccatcgctagctctata
cagagtgaattgtgtagcggtatgcccagtggaatcatcagtccaagcgatctgcccgac
agccctggtcagaccatgcctccgagtcgaagcaaaacaccaccacccccacaaaatcaa
catccacccccaatgaaacacaaaaaggtgccgcctccgccacctccgagggcggatatg
gctccaagacatgctgctgtacacgctgctgtccagaaagtccaggtgcttccaaataat
gacgccctcctacactttgcgacagagagtaccccagaaggattctcttgcgcatccagc
ctcagtgctttaagcttagatgaaccttacattcagaaagatgagctcaagatcatgcct
tctgttcatgaagacgaccagggaattgaggctgagcatgagaatgatgacactacagaa
cccccaagccaagggaagcgtgagacggaaaaagatattttggatgattccgatgatgac
gatatagaaatactggaggcttgcataaactcagccatgccaacaaagtcatcaagaaaa
ctcaaaaagcaatccccttccaacactacttctagaataccaccacctactgcccgtaaa
ccaagccaacttcctgtgtacaaattacacccttcacaaaccagaggacaacagaagacc
gtgaactttgcccatggagaggacatgcctaggatttactgtgtagagggaacccctatc
aatttctcaacagccacatctctcagcgacctaaccattgattcaccccctaatgagctg
gccaatgctgaaagccgtgctcctcctcgtgcagaaatatcatccagtcaaagaagggac
actattccagaaggtaaatgtacagaggaaaaagatgcaggtgttacttcttccacacaa
gctgctgggacagaaaatgaaggggatgatattttagcagagtgtatcagttcagccatg
ccaaaaggtaaaatccacaaatcctttagagtacagaaaatgtacgatcaaccactgcac
ccgtcagcttctcctgttagcctagtccagcaggaggttgaaaagaagcccacttcccct
gttaaaccaatgccacagagtagtgagtacagagctaggatgattaagaaaccccagcct
ccattcaacttttcttcataccctgataaaaacaaagaaaccaaaatgcaacagacaaaa
atggcatccagagatttcacagataagccaccaaatgtggagaggccacggccagggttt
gcttttgactcgccacagcattacacaccaatagaaggtacaccctattgcttctcacgc
aatgattcactgagttcattggactttgaggatgaggaacctaacctcgccaaggaaaag
gcagaacttagaaaagacaaagaccagagaaaagcttcaacaaaaaactgtggaaagcca
tccttaagggcaaacagggcaaatctaccacagactgctccaacaaaacctcagcaacaa
aaccaggcagtatttccacaagcatccaaagaaaacatggggccagtgccagatgagaag
cagaagttttccattgaagacacaccgatgtgtttctctagaaactcatctctcagctct
ttaagtgacattgaccaagagaacaacaacaaagacctccagccaaaagaggaggatgta
actcaggtggaagctcctacaagaccccaagcctctggttacgcaccaaaagcctttcat
gttgaagatacccctgtgtgtttttcaagaaacagttcactcagctcactaagcattgac
tcagaagatgaccttctacaagagtgcatcagttcagccatgccaaaaaagaaaaaacag
accgcaagaaataaagaggggaatgaccaagcagatgccactgaggagagaagcatggat
ggcattttagctgaggagccagaactcatattagatctcactgatacacatagtccagtt
tctgaacaagccttatcgccagattctgagtcttttgattggaaggccatccaagagggt
gccaattccatcgtcagcagtttgcaccaggcagctgctagcctctcaagacaaggctca
tctgactctgactccatactctccctcaaatctggaatatcccttgggtctccctttcat
ttacccttaaattcagaggataataaatctgcatctgacaaaggacgcccacggatatta
aaacctggtgaaaagagcactttagaagcaaaaaagaaagaaaaggaagaggaggcagca
aaagctcttaaagggggcaagaaagtctacaaaagtctcataacaggaaaaccacgtgca
atcactgagaccccagcctcattacagcagaggcagacggcccctactcttccaatctct
cgtggtaggacaatgatccatgtccctggtgttagaagcagttctccaagcactagccca
gtccaaaagaagcctccagcccgcggtccagcctcagtctcaaaactcccccctacccaa
gggcagagctccagtaattcaaacagaagcattaaaccacctgctaaatctgacccaagt
cctgccagggatcagcctggatctcaatcgggatcaagtaaagcttcatcacgatctgga
tccagagactccacaccatccaggccagctcagcagtccttgaccaccagacccatgcag
tcacctggtcgctcctctgtgtcacctggaagaaatggtctgggctcctcaaacaaacta
tcccaactgcctcgcactgcttctccaagcacatcgtcaaccaagtcttctggttctggc
aggatgtcctacacctcccctggaagacagatgggtcagcaaacgcaacccaagcagact
ggcttgactagaagcactagcggaatccctaggagtgaatctgcctcaaagagcctgaat
cagtgtggagttactggcacatctaagaagcaagatttgtccaggataacatccacaaag
tcaagtggaagtgagtcagaccggtcggagaaacctgccctagttcgccagtcaacgttc
atcaaagaggcccctagtccaacactgaagaggaaattggaagagtctgcctcgttcgag
tctctgtccccctcctctaccagccagtctcaaacgcctgtgtcaagcccgtctttgcca
gatatgtcgttgactttgccctatcaaggaagtcagggaagcaactggaaaaagtcccct
cagagtcaaaactcttcagaaaatgaggatgggaaacctcaaaggggagggaaacacgac
atttccagatcccattcagaaagcccctccagactccctaatcttaacaggacagggaca
tggaagagggagaaaagcaaacactcctcctctcttccaagggttggcacctggaagaga
actggcagctcctcttccatcctctctgcctcctctgagtcaagtgaaaagggcaaaagt
gaggatgaacgacagccactgagtccagcccaaaggtccccacacggtaaagatggaaac
cctttaaaaggaacatggaggaagatgaaggacagtgaaatctctcagtcagaaggccac
gattcttcctccatagactctaacaccatggccatggggcaccaaatgagccctgcagtg
tccaagactgaggatgtgtgggtgaggattgaggactgtcccattaacagtccaaggtct
gtaaaatctccaacagcaaacacacctccagtaatcgacagtgttctagtcaaaataccc
tctgttgatctcttgtcaagtgaaacccatcccaaacggtccaaaaatgaaagtgtaaat
gctcgtaggctaggtccagagactaatttaaacttgtttcggagcagtgagagtcttgat
aagaaagggccagacctcaagcctgctcagagcatcatcccagaggcccatgaactgcct
gttgctgaacgcaccccttttagctcctccaactctagcaaacacagctcacctagtggt
gctgtggctgccagggttagccctttcaattacactcctagccccaggaagagcagtgct
gacagtgccacaccaccacgaccctcacagatacccacgcctgtcagtgtcaccaacagt
gcaaaaaagagagaatctaaaggagaaagtgctggagaaagtgggtcctacattgtaacc
tcagtttaa
DBGET
integrated database retrieval system
