Salmo salar (Atlantic salmon): 106561945
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Entry
106561945 CDS
T04363
Name
(RefSeq) activating molecule in BECN1-regulated autophagy protein 1-like
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04137
Mitophagy - animal
sasa04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106561945
04137 Mitophagy - animal
106561945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106561945
03029 Mitochondrial biogenesis [BR:
sasa03029
]
106561945
Membrane trafficking [BR:
sasa04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
106561945
Mitochondrial biogenesis [BR:
sasa03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
106561945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
EIF3I
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
eIF2A
Acyl_CoA_thio
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
106561945
NCBI-ProteinID:
XP_013981878
UniProt:
A0A1S3KU92
LinkDB
All DBs
Position
ssa11:9352168..9464323
Genome browser
AA seq
1388 aa
AA seq
DB search
MTVYPKNSVRILSARERGARGLGSQRLLQQLVEEKTRRMKWQSQKVELPDSPRSTFLLAF
SPDRTLIASTHVNHNIYITEIKTGKCVHSLVGHRRTPWCLTFHPTIPGLVASGCLDGEVR
IWDLHGGSESWFTESNVAIASLAFHPTAQLLLIATNNEVHFWDWSRREPFALVKTASETE
RVRLVRFDPLGHYLLTAIVNPSNQQQSDDDSEVPMDSMEMPHFRHRSFLQSQPVRRTPIL
HNFLHILSSRNSGSQSEEQHPPAPAVNSAADSPSLSSGRYSALRNRSRPPYQGCVQHLGM
VCFCSRCSAIQAPSPSGEDPSDPESLETQSYASTFSSARTEPRQPSEPRSSHRPSAFSSV
YSGARGHSLRTPSSGHQQPGRECSGRLAGADWMGSMLNMRPERSGSIGVSPPRTSASSVS
LLSVLRQQDCSYQSPVYTSATEGGSFPPAVMSPHTSGNSSVDGPSTSSGHHSLGEGGSNS
PTSIRNVLQCNLNRYFMEYDRMQEMEQSGGAGRESSQEQQTREMLNNNIDSERPVMPHYQ
PPHSIDGGSGPSRGHMNRCRVCHNLFTFNQGTQRWERTGQTPSQEGSTSWQHPSPNPAFH
NMRQTVLQDPQSSDRRQLAQIQPSADEPGGDTAFPHRGTPSPQREQAVGLVYNQETGQWE
RVYRQSASPSPAVNVPQEALNQEMPDESPDDDYLRRRLLESSLMSQSRYDISGSRDHPIY
PDPARLSPAAYYAQRMIQYLSRRDSIRQRSLRYQSRLRPLSSTSDSPGSNSSPSIENNEV
EFEEFEDNGDRARHRAPRHARMSAPSLGRFVPRRFLLPEYLPYPGIFHHERGQPGLATHS
SVNRVLAGAVIGDGQSAVASNIANTTYRLQWWDFTKYDLPEISNSSVNVLVQNCKIYNDA
SCDISADGQLLAVFIPSSQRGFPDEGILAIYSLAPHNLGEMLYSKRFGPNAISVSLSPMG
HYVMVGLASRRILLHHNTDHMVAQVLRLQQPHGGETSMRRMFDVVYPMAADQRRHVSINS
ARWLPEPGLGLAYGTNKGDLVICRPVDAQSDGDGPAEHSELVFAVNNNRGGGTGESHDGE
RPGSSRAPLRSERDMGLMNAIGLQPRHPTPVVTSQGTQTPVLQLQNAETQTDRDPQVPST
SQASGATDIAGHIRDLHPGSSAETTPSLSAEASTEASTTLANPGESQDRGSGEDAVSRLR
GLIPEGGTTAVVQREQSTTMGSFGNSVIVSHRGSQTGTEAQGGGRGTQGRGQGGGDGWTS
LSPPHRGTLSFTEPTSRILTHQSMQLGESSAFLLEPSEAHSRTVTPLPSQYITVSSHLSP
QGPIGVEEGADGTPVDTDDAFEGVGLVDDLDPHSPSASSSSSSTLSPVVSPLNNNSYSAS
YHGDPYSR
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atgactgtctacccaaagaattcagtgcggatcttatctgcccgggagcgtggggcccgt
ggccttggctcccagcgcctcctgcagcagcttgttgaagagaagacccggaggatgaaa
tggcagagtcagaaagtggagttgccggacagccctcgttctaccttcctgttggctttt
agcccggacaggaccttaattgcctccactcatgtcaaccataacatttatatcaccgag
attaagacagggaagtgtgttcactctctggttggccatcgccgcactccttggtgtctg
acctttcaccctaccatccctggtttggtggcttcgggatgtctggatggagaggttcgc
atctgggacctgcatggtggcagtgagagctggttcactgagagcaatgtggccattgcc
tccctggcgtttcaccctactgcccagctccttctcatagcaacaaacaatgaggttcac
ttctgggactggagtaggagggagccatttgccctggtcaagactgccagcgagacagag
agagtcagactggtgaggtttgacccactgggtcattacctgttgaccgctatagtgaat
ccctctaaccaacagcagagtgatgatgactctgaggtccccatggatagcatggagatg
ccccactttcgccatcgatccttcctacagtcccaaccggtccgccgtacccccattctc
cacaacttcctgcacatcctgtcatcgaggaactcaggctcacagtctgaggaacagcat
cctcctgcacccgctgtcaatagtgctgctgactctcctagtctttcctctggacgttat
tccgccctgcgtaatcgctcccgacctccctaccagggttgtgtgcaacaccttggtatg
gtttgcttctgcagtcggtgctctgccatccaagccccttcaccatctggagaggacccc
tctgacccggagagcctggagacccagtcctatgcctccaccttctcctctgctcgcact
gagccccggcagccctctgagcctcgctcctcacaccgtccctctgccttcagcagtgtg
tacagcggtgctagaggacactctttacgcactccatcttcaggccaccagcagccaggc
cgggagtgttctgggcgactggcgggggcagactggatgggtagcatgctcaacatgcgg
cctgagcgtagtgggagtattggggtatctccacccaggactagtgcatcgtctgtcagc
ctgctgtctgtgctgagacagcaggattgctcttatcagtcgcctgtctacacctctgcc
acagagggaggaagctttcccccagcagttatgagcccccacaccagtggaaacagctct
gtagatggacccagcactagtagtggacaccactctcttggggagggagggagcaacagc
cccacctctatccgtaacgtgctgcagtgcaacttgaatcgctacttcatggagtatgat
cgcatgcaggaaatggagcagtcaggtggcgctggtagagagagcagccaagagcaacag
acacgggagatgctcaataataacatagactctgagcggcctgtcatgcctcattatcag
cccccccacagcattgatggtggttctggtccctcccgcggccatatgaaccgctgcaga
gtctgccacaacctgttcacatttaatcaaggtacacagcgctgggagcgcaccggccag
accccatcacaagaggggagcacctcatggcagcatccaagccccaaccctgcctttcac
aacatgaggcagactgtgctacaggatccccagtcctctgacagaagacagttagcacag
atacagcccagtgctgatgaacctggaggggacacagccttccctcaccggggaaccccc
agcccgcagagagaacaggcagtagggttggtgtataatcaggagacaggccagtgggag
agggtttacagacagtctgccagtccaagtccagcggtgaatgtaccacaagaggcctta
aaccaagaaatgcctgacgaaagccctgatgacgattacctgagaaggagacttttggag
tcatctcttatgtcgcagtctcggtatgacatatctggctcccgggaccatcccatttat
ccagatcctgccaggttgtcacctgctgcatattacgcccagcggatgattcagtactta
tctcggcgggacagcattcgccaacgatcactgcgctaccagagccgactgcggcctctc
tcatccacctcggatagcccaggaagcaactcttccccctccattgagaacaacgaggtg
gaatttgaggagtttgaggataacggtgatcgcgccagacacagggctccgcgccacgct
cgtatgtctgccccctcacttggcagatttgttccccggaggttcctactgcctgagtat
ctaccatatcctggcatcttccaccatgagaggggccagcctggcctggccacccattcc
tctgtcaacagggtcctagcaggtgcggttattggtgacggtcagtcagctgtggctagt
aacatcgccaacactacctaccgcctccagtggtgggacttcaccaagtacgacctacct
gaaatcagcaactcctctgtcaatgtgctggtgcagaactgcaagatctacaatgacgcc
agctgtgacatctctgcagacgggcagctcctggctgtgttcatacccagcagccagcgg
ggcttcccagacgagggcatcctggctatctactctctggcgcctcacaacctgggagag
atgctctactccaagagattcggtcctaatgccatttctgtcagcctgtccccaatgggc
cactacgtgatggtgggcttggcctctcgccggatcctgctccatcacaacacagaccac
atggtagcgcaagtgttacgcctgcagcagccccatggtggagagacttccatgaggaga
atgtttgatgtggtgtaccccatggccgctgatcagcggagacacgtcagcatcaactcg
gcccgctggctcccagaacctggcctgggtcttgcctacggtaccaacaagggtgacctc
gtcatctgcagacctgtagatgcccagtcagacggagacggccccgctgagcacagtgag
ctcgtatttgctgtcaacaacaatcgaggcggtggtaccggtgagagccacgacggagag
cgaccagggagcagcagggcccccttgaggtctgaaagggacatgggacttatgaacgcc
atcggtctccagccccgtcaccctacccccgttgtgacatcacaaggcacacagacaccc
gtcctacagcttcagaatgccgaaacacagaccgaccgagatccacaggttcccagcaca
tcccaggcctccggagcaacagacattgctgggcacataagggaccttcatccaggcagc
agcgcagagacgacaccgtctctgtcagccgaggcctccacagaggccagcaccaccttg
gctaacccaggggaatctcaagaccggggcagtggggaggacgccgtttctcggctccgc
gggctgatccctgagggtggtacgacggccgtggtccagagggagcagagcaccaccatg
ggcagcttcggtaacagcgtcatcgttagccaccgcggatcccagactgggacagaggct
cagggtgggggcagaggcacccagggcaggggtcagggtggtggtgatggttggacgtcc
ctctctccgccccaccgtggcactctgtcgttcacagagcccacctcccgtattctgacc
caccagagcatgcagctgggtgaaagctcagccttcctgttagagccctctgaggcccat
agcaggacagtaacacctctcccttcccagtacatcacagtctcttctcatctcagccct
caggggcccattggggtggaggagggggccgatgggacccctgtggacacagacgatgcg
tttgagggtgtgggacttgtcgatgatctagatccacactcgccctctgcttcctcctcc
tcttcttcaaccctgtcccctgttgtctcccctctcaacaacaacagctacagtgccagt
taccacggagacccctacagtcgatag
DBGET
integrated database retrieval system
