Salmo salar (Atlantic salmon): 106561980
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Entry
106561980 CDS
T04363
Name
(RefSeq) cytoplasmic dynein 1 light intermediate chain 2-like
KO
K10416
dynein cytoplasmic 1 light intermediate chain
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04145
Phagosome
sasa04814
Motor proteins
sasa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106561980
09142 Cell motility
04814 Motor proteins
106561980
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
106561980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106561980
03036 Chromosome and associated proteins [BR:
sasa03036
]
106561980
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sasa04812
]
106561980
Membrane trafficking [BR:
sasa04131
]
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
106561980
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
106561980
Cytoskeleton proteins [BR:
sasa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
106561980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DLIC
ABC_tran
Arf
AAA_22
AAA_16
SAP130_C
AAA_7
AAA_29
Roc
PduV-EutP
ATPase
AAA_24
SRP54
G-alpha
Motif
Other DBs
NCBI-GeneID:
106561980
NCBI-ProteinID:
XP_013981955
UniProt:
A0A1S3KTM7
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All DBs
Position
ssa11:10406398..10423340
Genome browser
AA seq
494 aa
AA seq
DB search
MAPVLEKKYLGAAGTGDTMENSNEDEEGQNLWTSILSEVSTRSSSKLPSGKNILVFGEDG
SGKTTIMSKLQGAEHNKKGRGLEYLYLNVHDEDIDDLTRCNVWILDGDLYHKGLLKFAVT
AESLNDSLAVFVADMSRPWTIMESLQKWASVLRDHVDKLKIPPEEMREMEQRMVKAFQEY
TEPEGADPASPQRRAPPAGGDDEGVVLPLGENVLTHNLGIPVLIVCTKCDAVSVLEKEHD
FREEHFDFIQSHIRQFCLQYGAALIYTSVKEEKNLDLLYKYIVHKIYDFQFTTPALVVEK
DAILIPSGWDNEKKIAILHENFTTVRPEDPFEDFIMKPPVRKLVHDKEVNAEDEQVFLMK
QQSLLAKQPATPTRGSTESPGRTASGSPRPTGRTGPTNVASVSPMTAVKKPDPNMKGAAA
NEGVLANFFNSLLSKKTGSPGSPGTGAAGAGSPGSVKKTGQKPVLTDVQAELDRMTRKPD
SMVTANNTPTENEA
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgttctggagaagaagtacctgggcgcagccgggacaggcgacactatggaa
aatagcaacgaagacgaggaaggacaaaacctatggacttcaattctcagtgaggtttca
acacgttcaagttctaagctgccatccgggaagaacatattggtgtttggtgaggatggg
tcaggaaaaacaacgattatgtcaaaactccaaggagcagagcacaataagaaaggaaga
ggcctagagtatctgtatctgaatgtccacgatgaggacatagatgaccttacacgctgt
aacgtgtggatcctggatggggacttgtatcacaaaggcctgctaaagtttgcagtgaca
gcagagtcactgaacgacagcttggcagtatttgtggcagacatgtcaagaccctggacc
atcatggagtcgctccagaagtgggccagcgtgctgcgtgatcatgtggacaagctcaag
atcccgccggaggagatgagagagatggagcagaggatggtgaaggctttccaggaatac
acagagccggagggagccgacccagcctctccccagagacgggctcccccagcagggggg
gatgacgagggtgtggtgctaccgctcggggaaaatgtactcacacacaacctgggcatt
ccagtgctaatagtttgcacaaagtgtgatgcagtcagtgttttagagaaggaacacgac
ttcagagaggagcacttcgacttcatccagtcccacatccgacaattctgcttacagtat
ggagctgcattgatttacacctctgtcaaagaggagaagaacttggacctcctatataaa
tacatagtgcacaaaatatacgacttccagttcaccacgcctgccttagtggtggagaag
gatgctattttgattccatctggatgggacaatgagaagaagattgcaattctgcatgaa
aattttacaacagtgagacctgaagacccctttgaagacttcatcatgaagcctccagta
cggaagctggttcatgataaggaggtcaacgcggaggacgagcaggtgttccttatgaag
caacagtctttgctggccaagcagccggccacaccaacaagaggatcgacagaatctcct
ggacggactgcttctggctcgcctcgacccactggccgtacaggccctaccaatgtggcc
agcgtctcgccaatgaccgcggtcaagaaacctgaccccaacatgaagggagcagcagca
aacgagggagtgctggccaacttctttaacagccttttgagtaaaaagactgggtcccct
gggagtccaggcaccggagctgcaggagcaggatctccaggatctgtcaagaaaacaggg
cagaagccggttttgactgacgtccaggcagagttggatagaatgactcgcaaaccggac
tccatggttacagctaacaacacaccgacagagaacgaagcgtga
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