Salmo salar (Atlantic salmon): 106562016
Help
Entry
106562016 CDS
T04363
Name
(RefSeq) platelet-activating factor receptor-like
KO
K04279
platelet-activating factor receptor
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04020
Calcium signaling pathway
sasa04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
106562016
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
106562016
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
sasa04030
]
106562016
G protein-coupled receptors [BR:
sasa04030
]
Rhodopsin family
Others
Platelet activating factor
106562016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
DUF2298
7TM_GPCR_Srx
7tm_4
PEN-2
Motif
Other DBs
NCBI-GeneID:
106562016
NCBI-ProteinID:
XP_013982036
UniProt:
A0A1S3KTK1
LinkDB
All DBs
Position
ssa01:complement(10849528..10852169)
Genome browser
AA seq
399 aa
AA seq
DB search
MMSSKEALSLKTELLALAEPTVESTMGMQEDLAVTRTVNLSTVVNRTFLDSDFRYTLFPV
FYGVLFVLGLIANSYVLFVLQRLRNAKAMSEIRIYMTNLTVADLLFVCALPFWIGYYHHR
GDWLYGDFLCRITGVFFFINTYCSILFLAAISVNRYWAITRPLAAASSDCWRRGVAITAV
IWVLTLSMSVPYLLETGIQVDEGNVSRCFEGYHDKTDDEKRSVATTHLIIVGCFVLVFFL
VVVCNLLIAHALLAQSPTQTRGSSSSQPRGVKGQALQMLCAVVGVFVVCFLPHHVVQGPW
TLAVLEIKEGWGRMDWGQRTRQRLNDTHQVTLMLMGLNCLLDPVVYCFATRKFRLYIKDH
LKQVGRGKRCSETAITHISMVEGKNVSQRLHSKQQQLKV
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcaagcaaagaggcactgagtttgaagacggagttgcttgctttagcagaacca
acagtggagtcgaccatggggatgcaagaggacttagcagtgaccaggacagtgaactta
tcgacagtcgtcaacagaaccttcctggactcggacttccgctacaccctcttcccagtg
ttttacggtgttttgttcgtccttggtctgatagccaacagttacgtgctgttcgtgctg
cagcgcctgcgcaacgccaaggccatgagcgagatccgcatctacatgaccaacctgact
gtggccgacctcctcttcgtgtgcgccctccccttctggattggctactaccaccaccgc
ggtgactggctctacggcgacttcctgtgccgcatcaccggtgtgttcttcttcatcaac
acctactgctccatcctcttcctcgccgccatcagcgtcaaccgttactgggccatcacg
cgcccgctggctgccgcctcgtccgactgttggcgccgcggggtggccatcacggcggtc
atctgggtgctcactctgtcaatgtccgtgccgtacctcttggagacgggcatccaggtg
gacgagggcaacgtgtcgcgctgctttgagggctaccacgacaagactgacgacgagaag
cggagcgtggccaccacccacctcatcatcgtggggtgctttgtcttggtcttcttcctc
gtagtagtctgtaacctgctcattgcccatgccctgcttgcccagtcccctacccagact
cggggctccagttcttcccagccccggggggtgaagggccaggccctgcagatgctgtgt
gccgtggtgggggtgttcgtggtgtgcttcctcccccaccacgtggtccagggcccctgg
actctggctgtactggagatcaaggagggctggggcagaatggactggggccagcggacc
aggcagaggcttaacgacacccaccaggtcaccttgatgctgatggggctcaactgcctc
ctggaccctgtggtgtactgcttcgccaccaggaaattccgcctatacatcaaggaccat
ctgaaacaggtggggaggggcaaaagatgctcggaaacagccatcacacacatttctatg
gtggagggcaagaatgtgagccagcggctccatagcaaacagcagcagttgaaggtttaa
DBGET
integrated database retrieval system
