Salmo salar (Atlantic salmon): 106562040
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Entry
106562040 CDS
T04363
Name
(RefSeq) neural-cadherin-like
KO
K27892
neural-cadherin
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sasa04515
]
106562040
Cell adhesion molecules [BR:
sasa04515
]
Cadherins
Cadherin related
106562040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Ig_Shg
Cadherin_CELSR2_9th
CADH_Y-type_LIR
Cadherin_pro
EGF
Cadherin_2
RET_CLD1
hEGF
EGF_Hmr-1
cEGF
Motif
Other DBs
NCBI-GeneID:
106562040
NCBI-ProteinID:
XP_013982045
UniProt:
A0A1S3KTX4
LinkDB
All DBs
Position
ssa11:complement(13731301..13936146)
Genome browser
AA seq
2900 aa
AA seq
DB search
MIWTILICYFVSSVLGNKTEERIPFFHGHVFENSEPGSKVNGLSIPVKRVDAQRWCSNSG
MHLKLLGDGSKDFNVFAHHKRGHILLKTSIVLDREERSEYLLSLGLCCQSCAATDLVVAE
VASVKVDVLDTNDHEPTFPNADIKIHLEDSTALRSVVYKVTAEDTDHGKNAELIYFALPK
NCSFYVVPKTGDVLLVDSILGLTAPIKFNVFAMDHGWPSRTSQSIAIEINPRQWPAVPPP
SQGEPKIRLPRKSRSLLESDEPVVIHVSEDASIGSVVVNLYPVRFQAASFELMDPGADSS
PVTVSRDSGDIVITRRLDRETDPLVEITVKVQDKRGPDWYMVRVELTVTDVNDNVPEWTM
VPSPYLAVVSPNALAGSLVYKLHAQDGDEGNNGEVEYFLSDGGDGRFEVDRKSGHVRTTG
LPLQRDKEYLLTVVAADRLGSRSPPVVVSVIAGARAPQFSNASFTISLPENTPERQPFLA
TPAVSFQKQPISYSLLINPSSLFSMQADTGEITLTRTIDFEMDQHSFLLMVRASEDQDSL
SSAAEVRVIITDENDCVPEFLQSIYSKESVPETVTTATSLLQVSASDCDSDLNAELTYYT
LSPDFSISPHGTIFPAGQLDYERPNHLYEFVVMAVDKGDVPRTGTATVRIRMANVNDEVP
EFSQHVYRTFVSEDAGPNTLVATVLAKDPDGDGITYKITTGNDEGNFVIDSQKGLIRLRS
SPPPRLQGVEYILNVTATDDNASGGPQALSSTAQVIVGVDDVNNNKPVFGKCQQYRERTT
VLENQPAGTFVLQVHAVDADEGSNGRVTYGFMHKDSTVPAFSVHPDTGVIVTSRKFDRER
QREYAVTVTATDQAADPLIGICQLNILILDENDNSPKFENLRYEYFLREDTMIGTSFLRV
AAHDDDYSTNAAVTYSMSKEQPEYLRVNPLTGWVYVNQPISQRTYITREIVATDGGNRSS
SVELSVTITNVKNQPPQWDRDSFDVVIPENTVRDTPIVTIKATSPLGDPRVTYNLEDGMV
PETNMPVRFYLTPNREDGSASILVAEPLDYETTRNFILRVRAQNVAAVPLAAFTTVYLNI
TDVNDNVPFFTSSIYEASVTEGAEVGTFVTQVSSNDLDLGLNGKISYSLLNDRSGDYQYF
RIDPELGSIYTEAVFDRETKGSYLLEVKSVDGWESARPGKHGQPNSDTAYVRVFISDVND
NKPVFAQTVYEVDVDEDADVGFAILTVSANDEDEGANAKLRYQITSGNTGGVFDVEPEVG
TIFIAQPLDYEQNKGYKLLVLASDGKWEDYADVMVNVVNKNDEAPVFTVNEYYGSVTEEL
DGSPVFVLQVTATDPDKDADQEALRYSLHGQGAESEFIIDEVTGKIYAQRTLNREERAVW
RFVVLATDEGGEGLTGFTDIIINVWDINDNAPIFTCAPDCHGNVPENSAPGTSVMEMTAT
DLDDSAVGQNAVLSYRIVGNTGTGGGGGSDMFSINPSTGTISVAMSSLDREQAETYLLMV
EARDGGGMTGTGTATIRVTDVNDHAPRFTERSCLARVPESSEPNAVVLELSAEDWDTGEN
AQLTFSVVAGDPEQKFFMVSQRQEQRGTLRLKKRLDYERPSEQRFNLTLKVEDLDFSSFI
HCVIEVEDCNDHAPIFIALSQPLAPLPEDVPVGSSVARLTASDSDSGQNKEITYRILQES
DPLGQFSVDQTGLVTVTSALDRETAAQHNLVILASDHGSPPLTGSATIQLALLDVNDNGP
EFEATYAPVVWENVSGPQLVRLNQTSTLLRAVDRDSAENGSPFYFSLPLELHHSNDFYLQ
DNGNGTATITALRAFDRERQKEFLLQIIMSDSGHPPKTVTNTLTITIGDENDHAHQAGEK
EIFVNSHRGRMPTTVLGKVYAPDPDDWDNKTYAFEGQVPNYFILNKRTGFLIIKENTPPG
SYEFQVCVSDGVWPDSVSGVTVYVRELRDEAIYNSGSLRLADVTAKEFIEQRGSVKSRYE
LLVDFLSEMLAVGVDDINVFGLMDIRERTLDVRFAVHSSPFLRAEKLQGYLAAHKQKLQS
FLQVNVSQVHVDECANTDCGGSGGCSNVLSVSDTPTVVDSGSMSLVSVTVESTAVCSCSG
REHVHKICSSYPRNPCFNGGICVDTQSGYRCQCPAQFEGPECQQTKHSFHGNGYAWFPPI
RPCFESRLSLEFVTEVADGLLLYSGPLAQLQPWDLEDFMAIELIDGTPTLKINHGSGTLV
LQLPGNVNVADRRWHRLDVRSNSKEVRFTLDRCAGATIMEMEGVGSWLTTEDHSSCEVTG
VTPNLDRHLNGTQVLQLGGVNENLPYVYPQLQHKHFTGCIRNLIVDSKFYDLGTPADSVG
SSPGCLTTDGSCVNGGIPSCGPRGRCHGEWGSFSCQCIPGYTGNQCEQEVPEYSFDGRSH
VHYQLASPLPARRTQVQVLVRTRKHGSAILSLLSKEQTEYLQIEIYQGLLAVFYNLGDGD
YNLTLPSYRLDNGEWHEVYLDRLDNELTLRVDGGGGRRETSAAPSRSLEIITDPAVVMLG
NAFPSGSNKSFQGCMRDLRLNGRYVPLDGQSRDGVSVVSSQGLSVGCSSDSCKRNQCSPP
FTCVDLWRVHECRCPPGHMVKLNGTGRFCVYTLCARRPCHRGTCVAQSPSKFTCHCPEGY
RGRHCEVALAIYRDDVGLSFSSLFAICICFMALIVLLLGIFLYTRWRSYKGLKEGVYHVS
AHHDGWEDIRENVLNYDEEGGGEEDQNAYDMAELQKSLQPSPAQSVQYSRSRAIHQHHHP
HTQHQHPQPQDTLSRLSASTAPSSFTTTLRRDVPPTRTPAQGQSRPLLLARKSLSFSSQD
LARYLCEIIRDADQAPESAPFDSLQVFSTEGGGSLAGSLSSFSSAGLEEDTARGQDSLKD
WGPRFEKLKALYEKTEASDL
NT seq
8703 nt
NT seq
+upstream
nt +downstream
nt
atgatttggactattttaatatgctatttcgtgtcatctgtacttgggaataagacagag
gaaaggatacccttctttcatggacatgtattcgagaactccgagccgggatccaaagta
aacggtctcagcatccctgtgaagcgggttgacgcgcagagatggtgttccaactccggc
atgcatctgaaactcttgggagacggaagtaaagatttcaatgtatttgcccaccacaaa
cgcggacacatacttctgaaaacctcgatcgtcctggacagagaggagcgctccgagtac
ctgctcagcctgggtctgtgctgccaaagctgcgccgccactgaccttgtggtcgcagaa
gttgcatctgtgaaagtggacgttttggacactaatgaccacgagccaacattccctaat
gctgatataaaaatccatctggaagactccactgctctgcggtctgtggtgtataaagtg
accgcggaggatacagaccacgggaaaaatgctgaactcatttactttgctcttcccaaa
aattgcagtttctacgtcgttccaaaaactggagatgtactgctggtggactctatattg
ggtcttaccgccccaataaagtttaacgtgtttgcgatggaccacggctggccctcacgg
accagtcagagtattgcaatagagattaatccccggcaatggccagcggttccaccgcca
tcccagggcgaaccgaaaatcagactacctcggaagtcgaggtccctgctagagtcggac
gaaccggttgtaatacatgtttccgaggatgccagtatcggttctgttgtagtgaacttg
tacccggtgaggtttcaggctgccagctttgagttgatggatcccggtgcggacagctcg
ccggtcacggtgagtcgggacagcggagatatagtaattacacggcgcctggaccgggag
acggatcctctcgtggaaattactgtgaaagttcaggataaaagaggtccagactggtac
atggtacgggtggagctgacagtgactgatgtgaatgacaatgttccagaatggaccatg
gtcccctccccctacctggcagtggtatctcccaacgccctggccgggtcactggtctac
aagctccacgcccaggacggagacgagggcaacaacggggaggtggagtacttcctgtct
gatggtggtgacgggcgtttcgaggtggacagaaagagtggtcatgtccggaccacgggg
ctgccacttcagagggacaaagagtacctgttgacagtggtggctgctgaccggctgggt
agccgtagtcccccggtggtagtgtcagtcatcgcaggagccagagcaccacagttctcc
aatgcatccttcactatttcactacctgagaacacaccagagagacagcccttcctggca
actccagccgtgtccttccagaagcagccaatcagctacagcctgctcatcaatcccagc
agtctgtttagcatgcaggcggacacgggggagatcactctgaccaggaccatagacttt
gagatggaccagcacagcttcctgctcatggtcagggccagcgaggaccaagatagtctg
agcagtgctgctgaggtgcgtgtgatcatcacagatgaaaatgactgcgttcctgagttc
ctgcagtccatttacagcaaagagagtgtgccggagactgtaaccacagcaacctctctg
ttacaagtgtctgccagtgactgtgactcggacctgaacgctgagttgacctactacact
ctgagcccagacttcagcatctctccccacggcaccattttccctgcagggcaactggac
tatgagaggcccaaccacctgtatgagtttgtggtgatggctgtggacaagggagatgtg
ccccggacaggtacagccactgtccgcatccgcatggccaatgtcaacgatgaggtccca
gagttctcccagcatgtctaccggacattcgtctcggaggacgctggccctaacacactg
gttgccacggtgcttgccaaggaccccgacggtgatggaatcacctacaaaatcacaacg
ggcaacgacgaaggcaactttgttatcgacagccagaaaggtctgatccggctgcgctcc
agcccacctcccagactccagggggtagagtacatcctgaacgtcacagcgaccgatgac
aacgcctctggtggcccccaggccctctcgtccaccgcccaggtcatcgtcggcgtggac
gatgtcaacaacaacaaacctgtctttgggaagtgccagcagtaccgggagcggaccacg
gtgctggagaaccagcctgcgggaacgttcgtcctccaggtccacgccgtggatgcagac
gagggctctaatgggagagtcacctatggattcatgcacaaagacagcactgtgcctgcc
ttcagtgtccatccagacacaggtgtgatagtgacgtccaggaagtttgaccgcgagcgt
cagcgggagtacgcggtgacggtgaccgctacggaccaggcagcagaccccctcataggg
atctgtcaactaaacatcctcattctcgacgagaacgacaacagccccaagtttgagaac
ctacgctacgagtacttcctacgggaggacacaatgattggcaccagtttcctgcgtgtg
gcggcccacgacgatgactacagcaccaatgctgccgtcacctactccatgtctaaagaa
cagccagagtacctgagggtaaacccccttaccggctgggtctacgtcaaccagcccatc
tcacagaggacctacatcacccgggaaatagttgccacggacggggggaaccggagcagt
tcggtggagctgtccgtcaccatcaccaacgtgaagaaccagcctccgcagtgggacagg
gacagctttgacgtggtcatcccggagaataccgtcagggacacacccatagtgactatc
aaggccacctctccgctgggggaccctagagtgacctataacctggaggacgggatggtg
ccggagaccaacatgcctgtacgcttctatctgacccctaaccgtgaggacggctctgcc
tccatcctggtggctgagcccctggactatgagaccaccaggaacttcatactgagggtc
cgggctcagaatgtggctgcagtcccccttgcagccttcactacggtctatcttaatatc
acagatgtgaacgacaatgttcccttcttcacctcgtccatctacgaggcgtcggtcaca
gagggggcggaggtggggacgtttgtcacacaggtgtcatccaacgacctggacctggga
ctcaacggaaagatctcctactccctgctaaacgaccgcagtggggactaccagtacttc
cggattgatcctgagctgggctccatctacacagaggccgtgttcgaccgtgagaccaaa
ggctcctacctgctggaggtcaagtcggtggacggctgggagtcagcacggcccgggaaa
catggacagcccaactcagacacggcgtacgtgagggttttcatcagcgatgtgaacgat
aacaagcctgtctttgctcagactgtgtatgaagtcgacgtggatgaggatgcagacgtg
ggctttgccatcctcactgtcagtgctaatgacgaggatgaaggcgccaacgctaagcta
cgctaccagatcacgtctggcaacactggcggggtgtttgacgtggaaccagaggtgggc
accatcttcatcgcccagcctctggactacgagcagaacaagggctacaagctgctggtg
ctggcgtcggacgggaagtgggaggactatgcggatgtgatggtcaacgtggtgaacaag
aacgacgaggcgccagtgttcacggtcaacgagtactatggttctgtgactgaagagctg
gatggatcgcctgtgtttgtgcttcaggtaactgctactgacccagataaggatgctgac
caggaggccctacggtactccctccatggccagggagccgagagtgagttcattattgat
gaggtgacggggaagatctacgctcagaggactctgaaccgggaggagcgggccgtgtgg
aggtttgtggtccttgccacagatgagggaggcgagggtctgaccggattcactgacatc
atcatcaacgtgtgggacatcaacgacaacgcgcccatcttcacctgcgcccccgattgt
catggcaacgtgccagagaactctgcccccggcacgtctgtcatggagatgacggccacc
gacctggatgactcggccgtgggccagaacgctgtgctgtcctacaggattgtgggtaat
acgggtacaggtggcggcggcggctctgacatgttcagcattaacccgtccacgggcacc
atctcggtggcaatgagtagcctggaccgggagcaggcagagacctacctgctgatggtg
gaggccagggacgggggtggcatgacgggcacgggtaccgccaccatcagggtgacagat
gtgaatgatcacgcacccaggttcacggagcgatcctgcctggccagggttcctgagagc
agtgagcccaacgcagttgtgctggaactgtctgctgaggactgggacacaggcgagaac
gcccagctcaccttcagtgtggtggcaggagacccagagcagaagtttttcatggtgagc
caacggcaggagcagcgtggcaccctgaggctgaagaagaggctggactacgagaggccc
agtgagcagcgcttcaacctcaccctgaaggtcgaagatctggacttctccagctttatc
cactgtgtcatagaggtagaggactgtaacgaccacgcacccatcttcatcgcgctttcc
cagccgctggcgcccctgcccgaggacgtgcccgtgggcagcagcgtggccaggctgact
gctagcgactctgactcaggccaaaacaaggagatcacctacagaatcctccaggagtca
gaccctctgggccagttctctgtagaccagactggtctagtcactgtgaccagcgctctg
gacagagagacagcagcacaacacaacctggtcatcctggcttctgaccacggctctcca
cccttgacgggcagcgccaccattcagctggccctgctggacgtcaacgacaacgggccg
gagtttgaggcaacgtacgccccagtggtgtgggagaacgtctctggtccccagctggtc
agactcaaccagacttccacactgctgcgggccgtagaccgagactcagcggagaacgga
tctccattctacttcagccttcccttagagctacaccacagcaacgacttctacctgcag
gataacggaaacggcacggccaccatcacagccctgagggccttcgaccgggagaggcag
aaagagttcctcctgcagatcatcatgagtgacagcggccatccgcccaagacggtcacc
aacactctgaccatcaccataggagacgagaacgaccatgctcaccaggcgggagagaag
gagatttttgtcaacagtcacagagggaggatgccgaccactgtcctggggaaggtctac
gccccggatcctgatgattgggacaacaagacctatgcctttgagggacaagtgcccaat
tacttcatcctgaacaagaggacgggattcctgatcattaaggagaacactcccccgggc
agctacgagtttcaggtgtgcgtgtcagacggcgtgtggccagactctgtctccggggta
acagtgtatgtgagggagctgcgggacgaggccatctacaattctggatccctgcgcctg
gcagacgtcacagcgaaggagtttattgagcagcgtggcagcgtgaagagtcgctatgaa
ctgctggtggacttcctgtcagagatgttggcggtgggcgttgatgacatcaacgtcttc
ggcctgatggacatcagggagaggacactggacgtgcgcttcgcggtgcacagcagtccc
ttcctcagagcagagaaactacagggatacctcgctgctcacaaacaaaagctgcagtcg
ttcctgcaagtgaacgtcagccaggtccacgtggatgagtgtgccaacacagactgtggc
ggcagcggcggctgctccaatgtgctgagcgtcagtgacacgcccactgtggtggattct
gggagcatgtcactggtgtcggtgacggtggagtccacggcagtatgcagctgctccggt
agagaacacgtccacaagatctgttcctcctatcccagaaacccctgcttcaacgggggc
atctgtgtcgacactcagagcgggtacagatgccagtgccctgcgcagttcgaggggcca
gagtgccagcagaccaaacacagtttccatggcaacggctatgcctggtttcctcccata
aggccttgcttcgagagccgtctctccctggagttcgtcacggaggttgcagatggtctg
ctgctctacagcgggcccctggcccagctacagccctgggaccttgaggacttcatggcc
atagagctgatcgatggcactcccacactcaagataaatcatggctcgggcacactggtc
ttgcagttgccaggcaacgtgaacgtggcggacagacggtggcaccgtctggatgtgagg
agcaacagtaaggaggtacgcttcacactggaccgctgtgccggggccaccatcatggaa
atggagggagtgggcagctggctgaccacagaggaccactcatcctgcgaggtcactggg
gtcacacccaacctggacaggcacctgaatgggacccaggtgttacagctgggtggagtc
aatgagaacctgccctatgtctacccgcagttacaacacaaacactttactggctgcatc
cggaacctcattgtcgacagcaagttctatgacttgggcactccagcggactctgtgggc
agctccccaggctgtctgactacggacgggagctgtgtcaacgggggcatcccctcctgt
ggccctagggggcgctgccatggagagtggggctccttcagctgccagtgcataccgggt
tacactgggaatcagtgtgagcaggaagttccagagtattcctttgatgggcggagtcat
gttcattaccagttggcgtctcctctgccagcccggcggacccaggtacaggttctggtc
cggacccgcaaacatggtagtgccatcctcagcctactgtccaaggaacagactgaatac
ctgcagatagagatctaccagggcctactggctgtcttctataacctgggagatggagac
tacaacctcacactgccctcctatcgccttgacaatggcgagtggcacgaggtctacctg
gatcgcctcgacaacgagctgaccctgcgtgtggacgggggcgggggcagacgggagacc
agtgcggctccaagccggagcctagagatcatcaccgaccctgcagtggtgatgctggga
aacgccttcccctcaggctccaacaagagcttccagggttgcatgcgggacctgaggctg
aacggtcgatacgtgcctctggatggccagtccagagacggggtctccgtggtcagttcc
caggggctctccgtgggctgctcctctgactcctgcaagaggaaccagtgtagccccccc
ttcacctgcgttgacctctggagagtccatgagtgcaggtgtccccctggccacatggtg
aagctgaacggtacggggaggttctgcgtctacaccctgtgtgccaggcggccgtgccac
cggggcacctgcgtggcacagtcgccctccaagttcacgtgccactgccccgagggctac
cgggggcgccactgcgaagtggcgctggccatctaccgagacgacgtgggcctgagcttc
agctccctgttcgccatttgcatctgcttcatggctctgatagtgctgctgctgggcatc
ttcctgtacacccgctggcgcagctacaagggcctaaaggagggcgtttaccacgtgtca
gctcaccatgacggctgggaggacatcagagagaacgtgctcaactacgatgaggaagga
ggaggagaggaggaccagaatgcatatgatatggccgagctacagaagtctctccagccc
agtccggcccagtctgtccagtacagccgctccagggccatccaccaacatcaccacccc
cacacccagcaccaacatccccagccccaggacactcttagcaggttgagcgccagcacc
gccccttcctccttcaccaccaccctgcgaagggacgtgccccccaccaggacccccgcc
cagggccagagcaggcccctcctgctggccagaaagagcctgtccttctccagccaggac
ctggcccgctacctgtgtgagatcatccgggacgctgaccaggccccagagtcggccccc
ttcgactccctgcaggtgttctccacggaggggggaggctcgctggccgggtccctcagc
tccttcagctcagccgggctggaggaggacacggctaggggccaagactccctgaaggat
tggggcccacgtttcgagaaactcaaagccctctacgagaagaccgaggccagcgacctc
tga
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integrated database retrieval system