Salmo salar (Atlantic salmon): 106562052
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Entry
106562052 CDS
T04363
Symbol
tpcn2
Name
(RefSeq) two pore segment channel 2
KO
K14077
two pore calcium channel protein 2
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04020
Calcium signaling pathway
sasa04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
106562052 (tpcn2)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
106562052 (tpcn2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106562052 (tpcn2)
Ion channels [BR:
sasa04040
]
Voltage-gated cation channels
Calcium channel, two-pore (TPC)
106562052 (tpcn2)
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Ortholog
Paralog
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Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
106562052
NCBI-ProteinID:
XP_013982067
UniProt:
A0A1S3KTU7
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Position
ssa11:14612627..14627554
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AA seq
766 aa
AA seq
DB search
MESEPLMTGSINYGSHPDNNDHLEKGSPKTRRLSYSVAAEYCCVEGGDEDLYLQQAVVFI
EDAIQYRSINHRVDANSLRLYRWYYSRLWQWGLGLTIAVVLMLAFIERPSSFSYTSDPRF
RPPPWEPPCGLTEGIEIVCLIIFAIDLTTKSYLIGWDEFRKCKWLIVYILAVSASVIDWT
LTLSMFCDQNLRVRRLIRPFFLLQNSSLMKKTLKCIKRTLPEIASVILLLALHLCLFTMI
GMLLFAKGENPKHNGEWETYFRDLPTSLSSLLVLLTTANNPDVMIPAYSLNRGYSIFFIL
FSGFGTYFLMNLLTAIIYNQFRGYLLMSVQASILRRRLGVRAAFEVMSCQGRGHDATHSE
EHVERVRVDASLQVMARVQMKSYYRQAIIKRVQQLSDGFIQWEAFRSLFDELDKDRIKEH
PPKPEYNSPLLQRLQLVFSHYYVMIVGNAVALANVMCICTILVLDSEKSIAERDDYYMEV
INCFFILYYLMEMSLKILAFGWRGYLSYRNNIFDGLLTVCLLLLQITIFATYRLPFPKWN
PASRGLMSLWEMVRLVNMLIVVRFLRIIPDIKLMALVASTLVDLVKNLRAFAGILVVVFY
VFAVLGIWLFQGAITAPGKMSVMSNSSMENITINFTMECGSYEQLGYWPNNFDDFASSLV
LLYNIMVVNNWQVFMDAYTRYTTEWSKVYFVSWWLTSSVMWVNLFVALILENFIYKWDRS
VTCSVADVERTGYETTVQLMFREQIQEPTEEELVTQLHQHPHLHLS
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggaatcggaaccactgatgactggaagcattaactacggctcccaccctgacaacaat
gatcaccttgaaaagggatccccaaagacgagacgtctgtcctactcggttgctgcagag
tattgctgtgtcgaagggggtgatgaggatctctacctccagcaagctgttgtgtttatt
gaggacgccatccagtaccgatccatcaatcatagagtggatgcaaactcattacgtctg
tacaggtggtactactccaggttatggcaatgggggctgggcctgactattgcggtcgtc
ttgatgctggctttcatcgagaggccctcgtccttctcctacacatcagaccctcgcttc
agacctcccccctgggagcccccctgtggcctgacagagggcatagagattgtctgcctc
atcatctttgccattgacctcaccaccaagagctatttgattggctgggacgagttccgg
aaatgcaagtggttgattgtctacatcttggccgtctcagcatctgtaattgattggacg
ttgacgttgagcatgttttgtgatcagaacctacgagttaggagactcattcggcccttc
ttcctccttcaaaactcctccctgatgaagaaaacattaaagtgcatcaagaggactctc
ccagagatagccagtgttatcctgctcctggccctccacctctgcctcttcaccatgatt
ggcatgctgctctttgccaaaggagagaacccaaagcacaacggggagtgggagacctac
ttcagagacttgcccacgtctctctcctctctcttggtgctcctcacaacagccaataac
cctgatgtgatgattccggcctattccttaaaccgaggatactccatcttcttcattctc
tttagtggttttggaacctacttcttgatgaacttactaactgccatcatttacaaccag
ttcaggggatacctgctgatgtctgtccaggcatccatcctaaggaggagactgggcgtc
agagctgcctttgaggtcatgtcctgccaggggcggggtcacgacgctacacactcagag
gagcatgtagagcgtgtgcgggtggatgcatctttgcaggtcatggcgagggtacaaatg
aagtcctactacagacaagccatcatcaagagagtgcagcagttgtcagatggcttcatc
cagtgggaggccttccggagtctttttgatgagctggacaaggaccgcatcaaagagcac
cctccgaagccagagtacaactctccactcctccagaggcttcagttggttttcagccac
tactatgtaatgatagtgggcaacgccgtggccctggccaatgtcatgtgcatctgtacc
atactggtgcttgactccgagaagtccattgcagagcgggatgactactacatggaagtt
attaactgtttctttattctatactacctgatggagatgagtctaaagatattagccttt
gggtggaggggctacctgtcatacagaaacaacatctttgatggacttctcacagtttgc
cttctgctccttcagatcaccatttttgccacctacaggcttccatttcctaaatggaac
ccagcgtcgcgtggtctgatgtctctgtgggagatggtacgtctggtcaacatgctcatc
gtcgtccgcttcctccgaatcatccctgatatcaagctgatggcccttgtagcgagtact
ttggttgacctggtgaaaaacctccgagcttttgcaggaatactagtggtggtgttctat
gtgtttgctgtccttggcatctggctgttccagggagccatcacagctccagggaagatg
agtgtgatgtccaattccagtatggagaacatcaccattaacttcaccatggagtgtggt
tcctacgagcagctgggctactggccaaacaactttgacgactttgcttcttccctcgtc
ctcctttacaacatcatggtggtgaataattggcaggtgttcatggatgcctacaccaga
tacaccacagagtggtccaaggtctactttgtctcctggtggcttacctcctctgtcatg
tgggtcaacttgtttgtggcactcattttggagaacttcatctataagtgggaccgaagt
gtcacatgttcagtggcggacgttgagcgaacaggctatgagaccactgtccagctcatg
ttcagagaacaaattcaggagcctacagaggaggagctggtcacccaactccaccagcac
cctcacctgcatctcagctga
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