Salmo salar (Atlantic salmon): 106562057
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Entry
106562057 CDS
T04363
Name
(RefSeq) B-cadherin-like
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04371
Apelin signaling pathway
sasa04514
Cell adhesion molecules
sasa04520
Adherens junction
sasa05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
106562057
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
106562057
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
106562057
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
106562057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106562057
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sasa04515
]
106562057
04090 CD molecules [BR:
sasa04090
]
106562057
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
106562057
Cell adhesion molecules [BR:
sasa04515
]
Cadherins
Major cadherins
106562057
CD molecules [BR:
sasa04090
]
Proteins
106562057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Big_13
RibLong
Cadherin_4
BACON_2
Motif
Other DBs
NCBI-GeneID:
106562057
NCBI-ProteinID:
XP_013982075
UniProt:
A0A1S3KU01
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Position
ssa11:14818665..14835691
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AA seq
880 aa
AA seq
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MGAFWFVELGLLTLFLQAFKPGSSEESKCIPGFNSEMYIFKVERNHLQSGRRLGKVVFDD
CTSRTSFLFHSEDSRFKVDGDGTLKLKRGVTLHNGHKEFYVSTQSMGKKITVPVRVLHEA
RHYHHHHEMTTQPQPGSSLSLPVLNFPKSSGGLKRRKRDWVIPPVNFPENERGPFPKIMV
QIRSSNDKEVKIMYSITGNGADQPPVGLFTVDKNSGILYVTQPLDREKKDKYILLAHAVA
VGAGKAEAPMEVIVKVIDQNDNKPVFTQNPFMGTVPEAAKPGDEFMQVTATDADEEGSAN
SDVRYTILSQEPPLPSPNMFVINPVTGGIRVNAPGLDREKILKYTLEIQAADLEGDGLTS
FGKAIITVTDSNDNAPQFVTPSYTVSVPENKVDALVVKMPVTDGDDPHSSAWATTFKIVD
GDPEGLFSVSTGPSKLEGIITTEKPLDFEKNNKYTLLVTVVNEVPFAIPLPTSTATVIVN
VEDVNEAPVFKPVEKMIRRPEDLHVDSDLVLYTATDPDTARNQKVTYKIKNDVAGWLSIN
KDTGLIKVKTLMDRESTFVQDNKYSVVVLGTDNDEIPATGTGTLIIELEDVNDNPPTIDE
RMIKVCNKESSPQLLSITDKDGAGFAAPYTVQLQGSSLSNWTARMNDSKTGIILTLKTML
DSGDYTVVLRVSDNQGLHQESTILASVCDCKGADVQCADKAVAGFGLSSILGILGAILLL
LLLSLLLLMFLRKRGGEKKEPLLQEDDVRDNIYYYDEEGGGEDDQDFDLSVLHRGLDNRP
DVFRNDIAPTMARPEYRPRPANPADIGNFIDDNLKAADNDPTAPPYDSLLVFDYEGGGSE
AGSLSSLNSSSSGDDQDYDLLQQWGPRFKKLSDMYGGGED
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgggggccttttggttcgtggagttggggttattaacattgtttctccaggctttcaag
ccagggtcgtcggaggagtcaaaatgtataccaggtttcaattcggaaatgtacattttc
aaagtggaaagaaatcacttacaaagtggccggagactaggaaaagtggtttttgatgac
tgcaccagccgcaccagctttctctttcactccgaggattcacgcttcaaagtagatggc
gacgggacgctgaaactgaagaggggggtgactctgcataatggacataaggagttctat
gtctctacccagtccatgggcaagaagatcactgttccagtcagagtgttgcatgaggcc
agacactaccaccatcaccatgagatgaccacccagccccagcctggatcaagtctgtct
ctacctgttctgaacttccccaagtcttcaggaggtctgaaaagaaggaagagggactgg
gtcattcctcccgtcaacttcccagagaatgagcgaggccccttccccaagattatggtg
cagatcaggtccagcaatgataaagaggtgaagatcatgtacagcatcactggcaatggg
gcagaccaacctcctgtgggactcttcactgtggacaaaaactctgggattctctatgtg
acccagcctttggacagggagaaaaaagacaaatacattctcctagcccatgctgttgct
gtgggtgcaggtaaggctgaggcacccatggaggtcattgtgaaagtcatcgaccaaaat
gacaacaaacctgtatttacccaaaatccatttatgggaacagtccctgaggcagcaaaa
ccaggtgatgagttcatgcaggtaacagccactgatgctgatgaggagggctctgccaat
tctgatgtcagatacaccattctcagtcaggagcctccactaccaagccccaacatgttt
gtcatcaaccctgtgactggagggattcgggttaacgcacctgggttggacagagagaaa
attcttaaatatactttggaaatccaagctgctgatttggagggagatggccttaccagc
tttggcaaagccatcattacagtaacggacagcaatgacaacgcgccacagtttgtgacg
ccttcgtacactgtgtcagtcccagagaataaagtagatgccttggtggtgaaaatgcca
gtgactgatggggatgatcctcactcctctgcctgggccaccaccttcaagatagttgac
ggggaccctgaaggccttttcagtgtgagcacaggccctagcaagctggaaggcatcatt
acgacagaaaagccccttgactttgagaagaacaacaagtacactctgctggtcactgtg
gtgaatgaagtcccatttgccatccctctgcccacctccactgctactgttatagtgaat
gtggaggatgtgaatgaagctccagtcttcaaaccagtggagaagatgatcagaagacct
gaggacctccatgtggacagcgacctggttctgtacacagccacagacccagacactgca
aggaatcagaaagtcacatacaagattaagaatgatgttgctggatggctcagtatcaac
aaagacactgggctgataaaagtcaagactctcatggacagagaatccacttttgtccaa
gacaacaaatactctgttgttgttctgggcactgacaacgatgaaatcccagcaacgggc
actggcacccttatcatagagctggaggatgtgaatgacaaccctccaaccatcgacgag
aggatgattaaggtctgcaacaaggagtcctccccacagctgctgtcaatcactgataaa
gacggagcgggcttcgctgctccatacactgtacagcttcaggggtcgtccctttccaac
tggactgccagaatgaatgactcaaaaactggcattatcctgacactgaagactatgttg
gacagtggagattacacggttgtcctgagagtgtctgacaaccagggcctgcaccaggag
agcaccatcctggcctccgtgtgtgactgcaaaggagctgatgtccagtgcgccgataaa
gctgtagcaggcttcggcctctctagcattctgggaattctaggagccattttactactc
ctattgttgtctcttctgctgctcatgttcctgaggaagagaggtggtgagaagaaggag
cctctgctgcaggaggacgatgtcagggacaacatctactactacgacgaggagggaggt
ggcgaggatgaccaggatttcgacttgagtgttctgcacagaggtctggataaccgtccg
gatgttttccgtaatgacatcgctccaaccatggcccggccagagtatcgcccacgaccc
gccaacccagccgacataggcaacttcattgatgataacctgaaggcagctgacaacgac
cccactgctcctccctacgactccctcctggtgtttgactatgaaggaggtggctctgag
gccggctctctcagctccctcaactcctccagctcaggagacgaccaggactacgacctc
cttcaacagtggggcccgcgcttcaagaagctgtctgacatgtatggaggaggagaggat
tga
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