Salmo salar (Atlantic salmon): 106562168
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Entry
106562168 CDS
T04363
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106562168
04091 Lectins [BR:
sasa04091
]
106562168
Ion channels [BR:
sasa04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
106562168
Lectins [BR:
sasa04091
]
C-Type lectins
Others
106562168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Ion_trans
GPS
CapR
Motif
Other DBs
NCBI-GeneID:
106562168
NCBI-ProteinID:
XP_013982341
UniProt:
A0A1S3KUG3
LinkDB
All DBs
Position
ssa11:18739331..18754044
Genome browser
AA seq
2003 aa
AA seq
DB search
MNDPDPGAGCGHMLRGSGFQWEATSNCSQELLFICQFGLYLMRVCVCEAESKECSWIELW
ITQQPIFSRPQFQKNIILQKPIGEFGVIKCYSMNQSTDGANCKVLYGSPLQIQVEVESGT
NVTYKLHRCEMLVANSSAVRGIIPHNITVGPEVEKQLGSGCHQLTLHASNGVSVLGVSTE
LQVCLLEPVEGLLGSVMAEEGECPDSDLYVSVSLDRGAPVQLLFQVSGANDSISETRDME
NTSMQVYNISTTIQGFLQVKVRAWNVFSHMDVDVGNTTVVCHNSSDLRQNGYANTTEKHM
RVRRANNLRITAIPETASQDTESVKLEVTGLGGLSNGKQSKFEWECSNHLRCSSVNKVTL
LFLPVGEITSNYMLSLEVTVTELNTKTCGSTTITTEVRPAKSGTPVQELQSAVADIVANL
GQQGMLSGETLGQMFKSVSDILNKGSSEEKNNRMKLREQMLMNISEALENSSSSTLQKVQ
LTARAVAGLTKRGDELSPNAQAYWSKCAQNKDLISDGLFFQLEASFLVANLSSSLLSMNV
SEHVGEEELVQAAIPIVEAASNILDVSSNREVSDLLLKGMDSVQSALLNGKKVDEASVIV
NSPHITVFVNRYEPVDVRMLSLKKNPFSWSEENNITGTVGSVSLTRGNGSVIPIENLSEE
IEVRVLQTPSYSMSFESIFLPRPEGGQANSTILYLGNYSTLMVDVPSPDVTLVLKIKPLK
DITFQLFLGYKDYPNDKQYIAKTQMPHQSNTQEEKYTWVLGPNDLIGKVGLHYLVVRPIV
KAGVKSVNATVTVTSIAAQCKYWNETLSTWSEDGCRVGPLTTLLATQCLCTHLTFFGNSF
FVMPNLVDVSRTAELFGTFAQNPVVVCFIGSIFVAYVLVVIWARRKDIQDIAKVKVTLLD
DNDPLAEYRYMLNISTGHRRGASTSSQVTVTLLGMEGESEPHHLTDPDKPVFERGAVDMF
LLTTPFSLGELQSIRLWHDNSGRHPAWYINKVTVQDVETGQKWHFLCNSWLAIDMSECTL
DKVFPVATEMDLKKFSNMFFMRTAKDFRDGHIWFSVISRPPTSTFTCVQRVSCCFSLLLC
TMLTSIMFWGIPTDPSEQTMDLGHIEFTWQQLMIGVQSSIIMFPINLLIVSIFRNTRPRE
TKPGKPKAEVSKQGKTGRVSRSQPSSPQRDRELTPDTVIKDIKKIAQSLSKAMKSPIPRL
ELEMKPGQQTDINTLLSLVEDIIQQQNRAGGEFYTDASKKEGSLILSLGVTNLQETSMCG
SPEKTGDGSQKRSTNSQYLYRQLCHVEKELSLLGPSRFPNPDSYCRAVQQVQGMKGLLES
SSLGGDELAQSPGQAESSDGDSGSKKCCQDGLPWWFVFIGWILVAATSGVSGYFTMMYGL
TYGKDRSINWLISMVVSFFQSLLIIQPLKVLAFAAFFALVLKKVDQDEYGDPKIEGALRN
PDDPDVVWAVRRDSTCSFYQPPPPTDIERMRNNMIKEHKVFALIKEILTYMGFMWMLLLV
AYGQRDPNAYFLTQHIRQSFSQGISDSMSHGNVFTWANTSLLSNLFGEYPGFITDGNSKL
VGNARLRQVRVQKNSCRIARSMRQAVPDCHAPYSWEVEDTGSYGPGWNRSVSENTSRTLR
SPWQYQTQARLRAQPIWGSVVLYRGGGFVVDLGPDSQNASSTLQYLFDNTWLDLFTQAVF
VEFTVYNANVNLFCIVTLMLETTAVGAFQFRSELQSVRLYQSTGGLHIFVMASEVIYFLF
IFYYMYVQGKLMKQQKWAYFKTKWNLLELAIILLSWSALSVFIKRTLLGNRDMEYYHNHK
DQFASFHETATADAVLGYLIAFLVLLATVKLWHLLRFNPKLNMITATLQRAWTDISGFLV
VITIMFLAYSIISNLMYGWKLYSYRTLLDSAMTMVSLQLGIFNYDEVLDYNPVLGAFLIG
SCVIFMTFVVLNLFISVILVAFTQEQIHHKPSEEEEIVDLMLMKLCSLFGIKYKKEDKEE
SNSPKVNANNASITKKEPSTISS
NT seq
6012 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaccctgatccaggggctggctgtggtcacatgctgaggggctcagggtttcag
tgggaggcaacaagcaactgtagccaggagctgctcttcatctgccaatttggtttgtat
ttgatgcgtgtgtgtgtttgtgaggcagagagcaaggagtgcagctggatagaactttgg
attacacaacaaccaatctttagtcgaccacaattccagaaaaacatcatccttcagaag
cccatcggggagtttggtgtcatcaagtgttatagcatgaaccaatcaacagatggtgca
aactgcaaggtcctgtacggaagcccccttcaaatccaggtagaagtagaatctggtacg
aatgtgacctacaaactccaccgttgtgagatgttggttgccaattcatcagcagtcaga
ggaatcatcccccacaacatcacagtgggaccagaggtggagaaacagctgggctctggc
tgccaccagctgaccctgcatgcctctaacggggtctcggtcttgggcgtgtccactgag
ctgcaggtgtgtctgctggagcctgtggagggcctgctgggatcagtgatggctgaggag
ggggagtgtccagactcagacctctatgttagtgtctccctggaccggggagccccggtg
cagcttctcttccaggtgtctggagccaacgacagcatctccgagaccagagatatggaa
aacaccagcatgcaggtttacaatatctcaaccactatccaaggatttttgcaagtgaaa
gtcagggcctggaatgtcttctcacacatggatgtggatgtggggaacacaacagttgtt
tgtcacaacagttctgacctcaggcagaatggctatgcaaacacaacagaaaagcatatg
agagttcgccgagctaataacttgagaatcactgccattccagaaactgccagtcaagac
actgaaagcgtcaaacttgaggtaactggcttaggaggactatctaatggaaagcagagc
aaatttgaatgggaatgcagtaaccatctgcgctgcagttctgtaaataaagtaacgtta
ctcttcctacctgttggggagataaccagcaactacatgctgtcgctagaggtgactgtt
acagaattgaacacaaagacctgtggaagtaccacaatcaccactgaggtgcggccagcc
aagtccggtactccagtgcaggagctccaatctgcagtggcggacatagtggctaatctg
gggcagcaggggatgctctctggagagacccttggacagatgttcaagtctgtgtcggac
atactgaataaaggctccagtgaggaaaagaataacaggatgaagctgcgagaacagatg
ctgatgaatataagtgaagcactggagaacagctccagcagcactcttcagaaagtgcag
ctgacggccagagctgtggcaggactcaccaagaggggtgatgagcttagtcccaatgct
caggcctattggtcaaaatgtgcccagaataaagacttaatttcagatggtctatttttc
cagcttgaagctagcttcctggtggcaaacctcagctcttccctcctctccatgaacgtc
agtgagcatgttggagaagaggagttggtgcaggcagctataccaattgtagaggcagcc
agcaatatcctggatgtttcttcaaacagagaagtctctgatttacttctcaagggcatg
gacagtgtgcagagtgcactgttgaatgggaagaaggttgatgaagcttctgtgattgtc
aacagccctcatatcactgtgtttgtgaacaggtatgaaccagtggatgtgagaatgctg
agtttgaagaagaacccattttcatggagcgaggagaacaatattaccggcactgtgggg
tctgtctccctgaccagaggaaatggttctgtcatccccatagagaacctatctgaggag
attgaggtcagagtgctgcaaaccccttcatattctatgtcatttgagagtatcttcttg
ccaaggcctgaaggagggcaagcaaacagcacaatactctacttgggaaactatagcaca
ctgatggtcgacgtcccttcacctgatgtaacactggtgctgaagataaagccattgaag
gacataacctttcaactgttcctggggtataaagactacccaaacgataagcaatacata
gccaagactcagatgcctcaccagagcaacacgcaagaggagaaatacacctgggtcctg
ggtcccaatgatttgatagggaaagttgggctgcactaccttgttgtgaggcccattgtg
aaagcaggggttaaatccgtcaatgccactgtgactgtcacctccattgctgctcagtgc
aaatattggaacgaaaccttatccacctggagtgaagatggctgcagggttggtccttta
accacgctattggccacccagtgcttatgtacgcacttgaccttcttcgggaactctttc
ttcgtcatgcccaacctcgtagatgtgtcacgtacggctgagctctttggcaccttcgcc
caaaatcctgtggtggtgtgctttattggttccatctttgttgcttacgtattggtggtc
atatgggcacgcaggaaggacatccaggacatagccaaggtgaaggtgacattgttggac
gataatgaccccttggctgaataccgttacatgctgaatatcagcactgggcatcggcgt
ggtgcttccacctcctctcaggttactgtgactctgctgggcatggagggagagagtgag
ccacaccacctcactgaccctgacaagcctgtgtttgagaggggtgcagtggatatgttc
ctgttgaccacgcccttctctctgggggagctgcagagcatcaggctgtggcacgacaac
tcagggaggcaccctgcctggtacataaacaaagttacggtgcaagatgtagagacagga
cagaagtggcacttcctgtgtaactcatggctggccatagatatgagtgagtgcactctg
gataaagtcttccctgtagccacggagatggatttgaagaaattcagtaatatgttcttc
atgaggacggcaaaggatttccgtgatggccacatctggttttctgtgatcagccggcct
ccaacgagcaccttcacatgtgtccagcgagtctcctgctgtttctctctgttgctctgc
accatgctgaccagcatcatgttttggggcatccctaccgacccctctgagcagaccatg
gacctgggtcatatcgagttcacctggcagcagctgatgattggagttcagagttcaatc
ataatgtttccaattaatctcctcattgtgagtatcttcagaaacacccgcccccgagag
acgaagcctggaaagcccaaggcagaggtgtccaagcaggggaagactggcagagtgtct
cgctcacagccctcctccccacagagggacagagaactcacgccagacactgtcatcaag
gacataaagaagattgctcagtcactctccaaggctatgaagagccccattccacgcctg
gagttagagatgaagcctggacaacagactgatatcaacactctgctctccctggtggag
gacatcatccagcagcagaaccgagccggtggggagttctacactgatgcctccaagaaa
gagggatctctcattctctcactaggggtaaccaatctgcaagagaccagcatgtgtggg
agccctgagaagactggggatgggagccagaaaaggagcaccaacagccagtatctgtac
aggcagctatgccatgtagagaaggagctgagcctactgggaccttctcgcttccccaac
ccagacagctactgccgggcagtgcagcaggtccagggcatgaagggactgctagagtct
tccagcctgggaggggacgagctggctcaaagcccaggccaagctgagagcagtgatggg
gacagtggcagtaaaaagtgctgtcaagacgggcttccctggtggtttgtgtttatcggc
tggatactggtggcagccaccagcggagtatcaggatacttcaccatgatgtatgggttg
acctatgggaaggaccgctctataaactggctcatctccatggtcgtttctttctttcag
agcctcctaatcattcagccgctgaaagtgctagcttttgcagccttctttgctctcgtt
ctgaagaaagttgatcaggacgaatatggggatccaaaaattgagggggcactcagaaac
ccagatgaccctgatgtagtctgggctgtcaggagggatagcacatgcagcttctaccag
cccccgccacccacagacatcgagaggatgaggaacaacatgatcaaggagcataaggtt
ttcgccctcatcaaagagattctcacctacatggggttcatgtggatgttgctcctggtg
gcgtatggtcaacgggaccctaacgcttacttcctgactcagcacattcggcagagcttc
agccaagggatctcagacagcatgagccacggaaatgtgttcacctgggcaaatacctct
ctcctcagcaacctcttcggagagtacccaggtttcatcacagatgggaactccaaactg
gttggtaatgcccgtcttcgccaggtgagggtgcagaagaattcctgccgaatcgcccgc
tccatgcgccaggctgtacctgactgccatgctccatactcatgggaggtggaggacacg
ggctcctatgggccaggctggaaccgctctgtgagtgaaaacacctcaaggaccctccgc
agcccctggcagtaccaaacccaggcccgactcagagcccaacccatctggggtagtgtg
gttctttacaggggaggggggtttgtggtggacctgggccctgactcacagaacgctagc
agtacccttcaatatctgtttgacaacacctggcttgatttgttcacccaagcagtcttt
gtcgagttcacagtgtacaatgccaatgtcaacctcttctgcattgtcacactcatgctg
gagaccacagctgtaggagcgttccagtttcgcagtgagctgcagagtgtccgactatac
cagtccaccggtggactccacatctttgtcatggcctctgaggtcatctatttcctcttt
atcttctactacatgtatgttcagggaaaactgatgaagcagcaaaagtgggcttacttc
aagacaaagtggaacctgctggagcttgccatcatcctcctgagctggagcgcactgtct
gtcttcattaagaggaccctgttagggaaccgggacatggagtactaccacaaccataaa
gaccagtttgccagtttccatgagacagccacagcagatgcagtgctggggtatctgatc
gcattcctggtgctactggctacagtcaaactgtggcatctgctgaggttcaaccccaaa
ctaaacatgatcactgccacactgcaacgggcctggactgacatatcaggcttcctcgtg
gtcatcaccattatgttcctggcctattctattatttctaatctgatgtatggctggaag
ctgtactcatataggactctcctggattctgctatgaccatggtcagcttgcaactgggc
atcttcaactatgacgaggttcttgattacaacccggtgcttggtgcgttcctcattggc
tcctgcgttatattcatgacctttgtggttctgaacctgttcatctcagtcatcctggtg
gcgttcactcaagagcaaatacatcacaagccctcagaggaggaggagatagtggatctg
atgctgatgaagctctgcagcttgtttgggatcaaatataagaaagaagataaagaagaa
agtaacagtcccaaggtgaatgccaacaatgcctctattactaagaaagaaccctccact
atatcctcatag
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