Salmo salar (Atlantic salmon): 106562204
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Entry
106562204 CDS
T04363
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM23-like
KO
K07963
tripartite motif-containing protein 23 [EC:
2.3.2.27
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106562204
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
sasa04031
]
106562204
Enzymes [BR:
sasa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106562204
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
106562204
GTP-binding proteins [BR:
sasa04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Others
106562204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arf
Roc
Ras
SRPRB
G-alpha
zf-RING_UBOX
zf-B_box
zf-RING_5
Gtr1_RagA
MMR_HSR1
zf-RING_2
zf-C3HC4
CEBP_ZZ
Motif
Other DBs
NCBI-GeneID:
106562204
NCBI-ProteinID:
XP_013982383
UniProt:
A0A1S3KUM6
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All DBs
Position
ssa01:114190280..114212913
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AA seq
571 aa
AA seq
DB search
MDVCVRHGRGATGNTVKVLECGVCEDVFSLQGDKVPRLLLCGHTVCHDCLTRLPLHGRAV
RCPFDRQVTELGDSGVWGLKKNFALLELLERLQNGASNQLGMAEESLKGMEESIIRCDED
ESHTASMYCTVCATHLCANCSQLTHSTRTLAKHRRVPLADKPHEKTLCPQHQVHAIEFVC
QEEICQPGPLMCCVCKEYGKHQGHKNVVLEAEANQIRASILDMAHCIRTFTEEVSEYSRK
LVGIVQQIEGGEQTVEDGISMAHTEHSSVGVPQVPGTAESARSCVRAYFADLHETLCRQE
EMALSVVDAHVRERLIWLRQQQEDMAILLSQVSTACLHCEKTLQQDDCRVVLAKQEINRL
LETLQKQQQQFTELADHIQLDAGIPVTFTKDNRVHIGPKMEIRVVTLGLDSAGKTTILFK
LKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKLRPLWKHYYLNTQAVVFVIDSCH
RDRLMEAHSELAKLLTEKELRDALLLIFANKQDVPGAVSVEEMTELLSLHKLCCGRSWHI
QGCDARSGTGLHEGLDWLSRQLVAAGVLDVA
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggacgtctgtgttcggcacggcagaggggccacaggcaacacggtgaaggtgttggag
tgtggggtgtgtgaggatgtcttctctctccaaggggacaaggtcccccggctgctgctc
tgcggtcacacagtctgccatgactgtctgacccggctgcccctgcatggtagagccgtc
cgctgcccctttgacaggcaggtcactgaactgggggactctggtgtgtggggtctgaag
aagaactttgccctgctggaacttctggagaggctgcagaatggagcgtccaaccagttg
ggcatggcagaggagtccctcaaaggcatggaagagagtataatccgctgtgacgaggac
gagagccacactgcatctatgtactgcacagtgtgtgccacccacttgtgtgccaactgc
tcccagctcacccactccacccgcaccctggccaagcaccggcgggtacccctggcagac
aagccccacgagaagacgctgtgccctcagcatcaggtccacgctatcgagtttgtctgt
caggaggagatctgccagcctgggccgctcatgtgctgcgtgtgcaaagagtacggcaag
caccagggacacaagaatgtggttctggaggcagaagccaatcagatccgtgcatccatc
ttggacatggcccactgtatccgaacgttcacagaggaggtgtcggagtattccaggaag
ctggttgggatcgtacagcagattgagggaggagaacagacagtggaggacggcatcagc
atggcacacactgaacattcgtctgtgggtgttccccaggtcccaggcacggcagagagc
gcacggtcatgcgtacgggcatacttcgctgacctccacgagacgctgtgcagacaggag
gagatggcgctcagcgtagtagacgcccacgtcagagagagactcatctggctccggcag
cagcaggaggacatggccatcctgctttcccaggtctccactgcctgcctgcactgtgag
aaaacactgcagcaggatgactgcagggtggttctggcaaagcaggagatcaacagactg
ttggagactctgcagaaacagcagcagcagttcactgagttggccgaccacatccagcta
gacgctggtatccccgtcacattcactaaggacaaccgggtccacatcggtccaaagatg
gagatcagggtggtgaccctgggactggatagtgcagggaaaaccaccatcctcttcaag
ctgaaacaggacgagtttatgcagcccatccctaccataggttttaatgtggagacagtg
gagtataagaatctcaagttcaccatctgggatgttggtgggaaacataagctacgacct
ctctggaagcactattacctgaacacacaagcggtggtgtttgtgattgacagctgtcac
agagacaggctgatggaggcccacagtgagctggcaaaactgctgaccgagaaagagctg
agagacgccctgctgctcatcttcgccaacaaacaggatgtccccggggctgtgtcagtg
gaggagatgacggagcttctgagccttcacaagctgtgctgtgggaggagctggcacatc
caaggctgtgacgcccgcagcggcacagggctccacgagggcctggactggctgtcccga
cagctggtggctgcaggcgtactggacgtggcctaa
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