Salmo salar (Atlantic salmon): 106562216
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Entry
106562216 CDS
T04363
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4-like
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04120
Ubiquitin mediated proteolysis
sasa04144
Endocytosis
sasa04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106562216
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106562216
09144 Cellular community - eukaryotes
04530 Tight junction
106562216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106562216
04121 Ubiquitin system [BR:
sasa04121
]
106562216
03029 Mitochondrial biogenesis [BR:
sasa03029
]
106562216
Enzymes [BR:
sasa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
106562216
Membrane trafficking [BR:
sasa04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
106562216
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
HECT type E3
106562216
Mitochondrial biogenesis [BR:
sasa03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
106562216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
Microp_apicomplexa_11
Motif
Other DBs
NCBI-GeneID:
106562216
NCBI-ProteinID:
XP_013982415
UniProt:
A0A1S3KUX6
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All DBs
Position
ssa11:20906297..20961316
Genome browser
AA seq
1265 aa
AA seq
DB search
MAHRLRLHFASRRSNTDPLSESLSSHGEESVLCVSTRSPTESLAHSSVQMKVIPGQLALA
LPPLSPEYGNLQRYSSVFIPKVNTGSVSKKSTLQISLQPRGKLNGELENSTEGGEPGVGE
LGSGSGSDGVSCSSSTASDAGYCSSSSSIFEPELPDQRRASHERSLPRRKARVPLRRCSS
LVIFPRSPCNTPPASPVSPVALPALPPARGSYQTSHQLQLSPSEPPQEDETGTSKASIAT
AMNGLRLSKSSFPSAEFRDARPMVHFNIPLPDKPKDKMEECEKTDHSATLDRPCRDKADH
SANLDQHSSVLLHFAHQRPMSGKASRNRTTVNVECPECPESPTHPSEGECGPRHIKLFRS
TSACFLPSTKLSEKSHSASLADNGNGQENHCHHALQRSFSLEVPYHNTGISCHVSNQKLS
NSPHVHIHVSHGYGARVSSPVIDVNTNHKRDHIQKSPARKTTTRDDFLGQVDVPLHQIPT
ENPNIERPYTFKDFLLHPRSHKSRVKGHLRLKMTYLPKNNSEDAAEQTEDMDPSWEFLEG
QDMSGPRHNHLLPAMPPGWEERQDNLGRTYYVNHETRTTQWHRPIVQDSQVEAEQRQNIH
MEAQQSFTARRQISDQEDSNDRQESPESWEIITEDESTFYNSQRSPPPPHSPLEFHSFCD
ELSRFQASGATSGNRRTSLQLQGPSSHSSRRGSAQTLTVEEHPVHPVLLATSAGLPPGWE
EKQDSKSRPYYVNHNSRITTWTRPLIQITSEAAAQAVLSQNATVYQPPMLSPEGSPQHSP
GSQRECGFMPAGWEVRNAPNGKPFFIDHNTKTTSWEDPRLKIPVHMRRRPSLDPTDLGPM
PPGWEERVHSDGRIFYIDHNTKNTQWDDPRLQNSAITGPAVPYSRDYKQKYEYFRKKLKK
PADIPNRFEMKLRRNAVLEDSYRRILSIKRADFLKARLWVEFEGEKGLDYGGVAREWFFL
ISKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDAF
FIRPFYKMMLQKPITLQDMESVDSEYFNSLKWILENDPIDLDLRFTIDEELFGQTHQHEL
KPGGSEIVVTDDNKKEYIHLVMQWRFVNRILKQMTAFKEGFYELIPQDLIKIFDENELEL
LMCGLGDVDVNDWRENTKYKNGYCPNQPVILWFWKTVLLMDAEKRIRLLQFVTGTSRVPM
NGFAELYGSNGPQLFTIEQWGTRDKLPRAHTCFNRLDLPPYESFEELREKLHIAIENAQG
FDGVD
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atggcacatcggctccgcttgcactttgcgtcgagaagaagcaacacggatcctctgtca
gagagcctgagcagccatggtgaggagagcgttctctgtgtgtcaacccgcagccccaca
gagagcctagctcacagctctgtccaaatgaaggtgattccagggcagctagccttggct
ttgcctcccctgtcaccggagtacggtaatttacagcgctactcatccgtatttataccc
aaggtgaacactggcagcgtcagcaagaagagtactctgcagatctccctgcagccccgt
ggcaagctgaatggagagctggagaacagcactgagggcggggagccaggggtcggcgag
ttgggttcgggcagtggctcagacggggtatcctgtagcagcagcacggccagcgatgca
ggctactgcagcagcagcagcagcatctttgagccagagctcccagatcagcgtagagca
tcccatgagaggagtctgccccgtaggaaagccagggtccccctgagacgctgctcctcc
ctggttatatttccaaggagcccctgtaatacaccaccagcctccccggtcagccctgtg
gctctacctgccctacctccagccaggggctcctaccagacttctcaccagctccagttg
tcccccagtgagcccccgcaggaggacgagacgggtacctcgaaagcgtccatcgccacg
gcgatgaacggcctgcgactctctaagagcagctttccgtcagcggagttcagagacgcc
aggcccatggtgcattttaacattccgcttccggataaacctaaagacaaaatggaggag
tgtgagaagactgaccactcggctaccttagatcgaccgtgtcgcgacaaggctgaccac
tcggcaaatttagaccaacactccagtgtgctactgcactttgcccaccagcgaccaatg
tctgggaaggcatctagaaacagaacaacagtcaatgttgaatgtcctgaatgtcctgaa
tctccaacccacccctcggagggtgaatgtggccctcgccacattaagctgtttcgcagc
acctcggcttgctttcttccctcaactaaactttcagagaagagccacagtgccagtctc
gcagacaatggaaatggacaggaaaaccattgtcatcacgccttacaaaggagcttttct
ctggaagtcccctaccataatactggtatttcatgtcacgtttccaaccaaaaactatct
aactctccacatgtgcacatccatgtgtcccacggctatggggcaagggtctctagccct
gtcattgatgtaaacactaaccacaaaagggatcacatacaaaagagccctgcaagaaag
accacgacacgtgatgactttctgggacaggtggatgtaccattacaccagataccgaca
gaaaatcctaacattgaaaggccgtacacattcaaggattttctacttcacccgagaagt
cacaaatccagggtcaagggtcatctccgtctgaagatgacctacctacccaaaaacaac
tcagaggatgctgcagaacagactgaagacatggatcctagctgggagtttctagagggc
caggacatgtccggtcccaggcataaccacctgctgcctgcaatgccccctggctgggag
gagaggcaggacaacctgggcaggacctactatgtcaaccacgaaaccaggacgacacag
tggcacaggcccatagtacaagacagccaggtggaggcagagcaaaggcagaacatccac
atggaggcccagcaatccttcaccgcccgcaggcagatctctgaccaagaggactccaac
gacagacaagagtctcctgagagctgggaaatcataacagaggatgagtccaccttctac
aacagccagcgctccccccctccaccccactcccccctggagtttcactccttctgtgac
gagctcagtcgcttccaggcctcgggtgccacatccggcaaccgacgtacctccctccag
cttcagggcccttccagtcactccagtcgcagaggcagtgcccagactctgaccgtagag
gagcaccctgttcatcctgtgttgttagcaacctcagcggggctgcctccaggctgggag
gagaagcaggatagtaaaagcagaccctactacgttaatcacaacagcaggataaccact
tggacacggccactcatccagataacctcagaggcagcagcccaggctgttctgtcccag
aacgccactgtgtaccagccccctatgctctctcctgagggctctccccagcactccccc
ggctcacagagggagtgtggcttcatgccggcgggctgggaggtccgcaatgcccccaac
ggaaaacccttcttcatcgaccacaacactaagaccacttcctgggaagaccccaggttg
aagattcctgtgcacatgaggaggagaccttcgctagacccaactgacctcgggccaatg
ccgcctggctgggaggagagggtccacagtgatgggaggatattctacatagatcacaac
acgaagaacacacaatgggatgaccccagactgcagaattcagccataactggaccagct
gtgccttactccagagactataaacagaagtatgaatacttccggaagaagctgaagaaa
ccggctgacatccccaaccgctttgagatgaagctcaggcggaacgccgtgctagaggac
tcttacagacgaatcctgtcaatcaagagggccgacttcctgaaggcccggctgtgggtg
gagtttgagggagagaagggcttggattacgggggcgtggccagggaatggttcttcctc
atctccaaggagatgttcaacccctattatgggctgtttgagtattctgccacggacaac
tacactctgcagatcaaccccaactcaggcctctgcaatgaggaccacctgtcctacttc
aagttcattggccgtgtggcaggcatggctgtctaccatggcaagctgctggacgccttc
ttcatcaggcctttctacaagatgatgttgcagaagcccattactctacaggacatggag
tctgtggacagtgagtacttcaactccctgaagtggatattggagaatgacccgatagac
ctggatctgaggttcaccatagacgaagagctctttggacagacacaccagcatgagctg
aagccaggaggatctgaaatagtagtcaccgatgacaacaagaaggaatacatccatctt
gtcatgcagtggaggttcgtgaacaggatactgaagcagatgaccgcattcaaggaggga
ttctatgagttgataccccaggatctcatcaagatctttgacgagaatgagctggagctc
ctgatgtgtggcctgggagacgtggatgtgaacgactggagggagaacaccaagtacaag
aatggctactgtcccaaccagcctgtcatcctatggttctggaagactgttctgctgatg
gatgcagagaagcgtatccgcctgttgcagtttgtgactggcacctcccgggtcccaatg
aatggctttgcagagctctacgggtctaacggaccacagctgtttaccatcgagcagtgg
ggaacacgagacaaactacctagagcccacacgtgcttcaaccgactggacctgcctccc
tatgagtcgtttgaggagctgagggagaagctacacattgccatagagaatgcacaaggc
tttgatggagtggattag
DBGET
integrated database retrieval system
