Salmo salar (Atlantic salmon): 106562233
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Entry
106562233 CDS
T04363
Name
(RefSeq) transcriptional repressor CTCF-like
KO
K23195
transcriptional repressor CTCF
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106562233
03036 Chromosome and associated proteins [BR:
sasa03036
]
106562233
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106562233
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
106562233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451_C
zf-met
Stm1_N
zf-C2H2_6
zf-C2HE
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
106562233
NCBI-ProteinID:
XP_013982441
UniProt:
A0A1S3KUR2
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All DBs
Position
ssa11:complement(21157588..21168848)
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AA seq
801 aa
AA seq
DB search
MGKLPYHRQRKTKQALSAQANLPGKGRPRTRLFSMEGEVVSIETAQVEGLQDSGEGAELL
QTAEAALMEGGVAPQVVTGNVEMMVMDTLDSTLDPALLQMKTEVLEGGGTVTVTGGDEGQ
IITLQVVNMEGNMEQTSAALGLGQLQLVQVPVTTATVEELQASFVDASAGNTEAEPVICH
TLPLPEGFQVVKVGANGEVETVEQEELQAAQDELQVIHGEEEEEAEPQVEDQTWSKDPDY
QPTAGIRKGKKGKKSRLRYGEGERDMDVSVYDFEEEQQEGMLSEVNAEKVVGNMKPPKPT
KIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNT
HTGTRPHKCQDCDMAFVTSGELVRHRRYKHTFEKPFKCSMCDYASVEVSKLKRHIRSHTG
ERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVA
KFHCPHCDTVIARKSDLGVHLRKQHSFMEMGRKCRYCDAVFHERYALIQHQKSHKNEKRF
KCDQCDYCCRQERHMIMHRRTHTGEKPYACSQCEKTFRQKQLLDMHFKRYHDPNFIPTAF
VCSKCAKTFTRRNTMLRHAENCNGENTGDENGTPPKKGRRGRKRKMRSRRDDDDDDTEPE
LDDIEEEEEELLAEIEVEQAPPVVPVPAPVGPPAKRKRGRPPKAKPAPTAAIIRVEDETT
GEVDDIIVKKEMKAEQASQEEEAVEDEVPAVEVEHAEGEPANQVEESFQGEEVVQEVALS
VTEAPPNGDLTPEMILSMMDR
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagcttccctaccatcgccagaggaagaccaaacaagcactgagcgctcaagca
aatttacccggaaaaggaagaccgaggaccaggttgttttctatggagggggaagtcgtt
tccattgagaccgctcaggttgagggtctccaggacagtggggagggagcagagctgctc
cagactgcagaggctgccttgatggaagggggtgtggcaccccaagtggtgacagggaat
gttgaaatgatggtgatggacaccctggactcaacccttgaccctgccctgctacagatg
aagactgaggtcctcgaagggggtggcacagtgacggtcaccgggggagacgagggacag
atcatcaccctgcaggtggtgaacatggagggcaacatggagcagacgagtgcagcgctg
gggcttggacagctgcagctggtgcaggtccctgtcactacagccaccgtggaagaactc
caggccagctttgttgacgcctcagcaggcaatactgaggcagagccagtgatctgccac
accctccctctgcccgagggcttccaggtggtgaaggtgggggcgaatggagaggtggag
acagttgagcaggaagaactgcaggcagcccaggatgagctccaggtgatccatggggag
gaggaggaggaagctgagccccaagtagaggaccagacctggtccaaagacccagattac
cagccaactgctggcatccgcaaggggaagaagggcaagaagagccgcctgcgttacggg
gagggggagcgggacatggacgtgtctgtgtatgactttgaggaggagcagcaggagggg
atgctctctgaggtcaacgctgagaaggttgtgggcaacatgaagccgcccaaacccacc
aagataaaaaagaaaggtgtgaagaagacgttccagtgtgagctgtgtagctacacctgc
ccccggcgctctaacctggaccgccacatgaagagccacacagatgagaggccacacaaa
tgccacctgtgtgggagggccttcagaacggtcacactgctgaggaaccacctcaacaca
cacacgggcactcgtcctcataaatgccaagattgtgacatggcatttgtgaccagtgga
gagctggtgcgtcatcgccgctacaaacacacattcgagaaacccttcaagtgctccatg
tgtgactacgctagtgtggaggtgagtaagctgaagagacacatccgctcccatacaggc
gagaggcccttccagtgcagtctgtgcagctacgccagccgagacacctacaaattgaag
agacacatgaggacacactcaggtgagaagccatatgagtgctacatctgccatgctcgt
ttcacgcagagcggcaccatgaagatgcacatcctgcagaagcacacagagaatgtggcc
aaattccactgccctcactgtgacacagtcatcgcccgcaagagcgacctgggtgtgcac
ttgcggaagcagcattcgttcatggagatgggcaggaagtgtcgttactgtgatgctgtg
ttccacgagcgttacgcactcatccagcaccagaaatcccacaagaacgagaagcgcttc
aaatgcgaccagtgtgactattgctgcagacaggagcgtcacatgatcatgcacagacgc
acacacacgggggagaagccgtacgcctgcagccaatgtgaaaaaactttccggcagaag
cagctgctggacatgcacttcaaacgctaccatgaccccaatttcatccccactgccttc
gtctgcagcaagtgtgccaagaccttcactcgcaggaacaccatgctgcgtcacgcggag
aactgtaacggagagaacaccggtgacgagaacggaaccccgcccaagaaaggccgccgc
ggcagaaagaggaagatgcgctccagacgggatgatgacgatgatgacactgagcctgag
ctggatgacattgaggaagaggaggaggagctgctagctgagattgaagtggagcaggca
ccacctgttgtccctgtccctgcccctgttggcccgccagccaagaggaaacgtggaaga
cctcccaaggccaaacctgccccaacggcggcaatcatccgtgtggaggatgagaccaca
ggcgaggtggatgacataatcgtgaagaaagagatgaaggccgagcaggcgagccaggag
gaagaagctgtcgaggatgaggtgccagcagtagaggtggagcatgctgaaggagagcct
gccaatcaggtagaagagtcattccagggggaggaggtggtgcaggaagtggcactgtct
gtcacagaggctccgcccaacggtgacctcactcctgagatgattctcagtatgatggac
cggtga
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