Salmo salar (Atlantic salmon): 106562317
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Entry
106562317 CDS
T04363
Symbol
CAPR1, Caprin-1
Name
(RefSeq) caprin-1-like
KO
K18743
caprin-1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106562317 (CAPR1)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
106562317 (CAPR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
EC042_2821
Motif
Other DBs
NCBI-GeneID:
106562317
NCBI-ProteinID:
XP_013982589
UniProt:
A0A1S3KWB7
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Position
ssa11:complement(24482078..24493311)
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AA seq
690 aa
AA seq
DB search
MPSATVGNNAVQSSSPELGSGTQSEAMKQVLQVIDKKVRNMEKKKGKLDDYQAKKNKGER
LNQDQLDALTKFQEVTNNLDFARELQKSFLSLGHEIQKAVKKSARREQLQREETEQRRLK
TVLELQFLLDRLGDEQTRQDLKQPAAGSPLLTDADLTALDNFYKLVGPERDHDVRLTDQY
EGASLHLWELLEGRDQAVAGTTYKTLKETLDKVLLSGYFDRAQTHQNGVCEEEEEEEEEE
EEEEQQQQSVVHESSGNGEQPAEPEGTVTEEYIEAIEVEASEFVNRQLIPETTYSSTGND
QVEEWIADVQVVNALQHHSPPQMTPEPHTVNPVSHTPDPVVRKQVVQDLMAQMQGTYNFM
QDSMLEFDGHALDPAIVLAQPMKSAQSMDLQQMGQFHSESRLSQPSSVPESTHIPMVSPT
PDGYSSTAPLYQPSHTAEPRPQTDGTDHIQASMSLSSEQSPAPSSLPSAFPPVSTPHSGG
INVNAAPFQSMQAVFNLNAPVPPTNEADSLKQNQFPGGYGQGFSSQAEHSLEEPDIQQDT
LQSAVGGFHTQDQVMSAAAGHQVQSSQGPGFGRQGQSFYNSRGGVPRAGPRNPRGMINGY
RGSSNGFRGGYDGYRPPFSNTPNNGYGQQAQFSTAPRDYPNSTHQREGYQPGYKRGAAQG
PRGCSRVTGRGGLFKPSRGIVTQMAGHQAN
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgccttcagcaacagttggcaacaatgctgttcagtcctccagcccagagttgggttct
gggacccagtctgaggccatgaagcaggtcctgcaggtgatagacaagaaggtccgcaac
atggaaaagaaaaagggcaagctggatgactaccaggccaagaagaataaaggagaacgg
ttgaaccaggatcagctggatgccttgaccaagttccaggaagtaaccaacaacctggat
tttgcaagggagttgcagaagagcttcctgtctttggggcatgagatccagaaggcagtg
aagaagtctgcccggagggagcagctgcagcgggaggagacggagcagaggcggctgaag
actgttctggagctgcagttcttgcttgaccggctgggggatgagcagacgaggcaggac
ctgaaacagcccgctgcaggctcccccctgctcaccgatgctgacctcactgcactggac
aatttctacaagctggtgggccctgaacgggaccatgacgtcaggttgactgaccagtat
gagggtgcctccctacacctatgggaactgctagagggcagagaccaggctgtggcagga
acaacatacaagacactgaaggagaccctggacaaggtgctgctgagtggctattttgac
agagcacaaacgcatcagaacggagtgtgtgaagaagaggaagaagaagaggaggaggag
gaggaggaggagcagcagcagcagtctgtggtgcatgagtcgtctgggaacggggagcag
cctgcagaaccagaaggaacagttactgaagaatacatagaggccattgaagtagaagcc
tcagagtttgtaaacagacagttgattccagaaaccacatacagcagcactggcaacgac
caagtagaggagtggatagcagacgtccaggtggtcaatgccctccagcaccattctcct
ccccaaatgacccctgagccccacactgtgaacccagtctcccacacgcctgaccccgtg
gtccggaagcaggttgtacaggacctcatggcccagatgcaggggacctataacttcatg
caggactccatgttggagtttgatggccatgccctggacccagccatcgtgttggcccag
cccatgaagtctgcacagagcatggacctgcagcagatgggtcagtttcattcagaatcc
agactttctcaaccaagctcagttcctgaatctacacacatccccatggtctcccccaca
cctgatggctactcctccacagcgcccctctaccagccctcccacacagcagagccccgg
ccacagacagacggcaccgaccacatccaggcctcgatgtccctgtcgtctgagcagtcc
cccgccccgtcctccttgccctctgccttcccgcccgtctccaccccccacagcggcggc
atcaatgtcaacgcagcaccattccagtccatgcaagcggtgttcaacctgaacgccccc
gtgccccccactaacgaagcagacagtctgaagcagaaccagttccccggcggctacggc
cagggcttcagcagccaggccgagcactccttggaggagcctgacatccagcaggacact
ctacagtccgctgtaggaggcttccacacccaagaccaagtgatgtcagcggcagcgggc
caccaggtgcagtcgtcccaggggccaggctttgggcggcaaggccagtccttctataac
agcagggggggcgtgcctcgcgcaggccccaggaaccctcggggcatgatcaatggatac
cgaggatcctctaacggcttcagaggaggatatgatggctatcgccctcccttctcgaac
actccaaacaatggttatgggcaacaggcccagttcagcacggcgccccgggactacccc
aacagcacccaccagcgggagggatatcagccaggctacaagcggggagcagcccaggga
cctcggggttgctctcgagttacaggccgggggggactgttcaagcccagccgagggatt
gtgacccaaatggctggacatcaagccaattag
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