Salmo salar (Atlantic salmon): 106562409
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Entry
106562409 CDS
T04363
Name
(RefSeq) sorting nexin-1-like
KO
K17917
sorting nexin-1/2
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106562409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106562409
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sasa04990
]
106562409
Membrane trafficking [BR:
sasa04131
]
Endocytosis
Macropinocytosis
Sorting nexins
106562409
Domain-containing proteins not elsewhere classified [BR:
sasa04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
106562409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
Sorting_nexin
BAR_3_WASP_bdg
Gp5_trimer_C
Motif
Other DBs
NCBI-GeneID:
106562409
NCBI-ProteinID:
XP_013982750
UniProt:
A0A1S3KVW3
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All DBs
Position
ssa11:complement(29517061..29529065)
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AA seq
634 aa
AA seq
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MAASSPRNPPPLPGAENQDPLSEMADEDSDEGEDIFVGNSNPVAESFQPDTANGEEPADL
FSEEETNTAVNSSITTSKSNGVHSDNENDLFAVHSEASVELSMENPSTTAKTSGAEFTPS
LTLSATQPKSMEQVGYNRTSATQPRSMEQVGYNRTSATQPRSMEQVDYNRTSATQSRSME
QVGYNRTSATQSRSMEQVGYNRTSATQPRSMEQVGYNRTSATQPRSMEQVGYNRTSATQP
KSMEQLEEEKDEDSFDMDIAVTNPEKIGDGMNAYMAYKVSTRTTLPMFRNRTFSVWRRFS
DFLGLYEKLSVKHSLNGCIIPPPPEKSVVGMTKVKVGKEDSSSADFVERRRAALERYLQR
VVCHPSLLQDPDVREFLERDELPRAVGTHTLSGAGFLKMINRASDAVSKMTIKISDSDAW
FDNKLQEVESEELQLRKLHAVVDSLVNHRKELCGNTAVLAKSMAMLGNSEDNTALSRALS
QLAEVEDKMETLHQEQAASDFFILAELLADYIRLLGAVRGCFEQRMKTWQRWQEAQSTLQ
KKREVEAKLLWANKPDKLQQAKEEITEWEGKVTQYERDFDRISVTVRKEFLRFEKEKSKD
FKSQIVKYLESLLQSQQRLVKFWEAFLPEAKAIA
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggcggctagctcaccgcggaatccccctcctctacctggagcagagaaccaagaccca
ctttccgaaatggcagatgaagacagtgacgaaggggaggatatattcgttggcaatagc
aaccctgttgcagagtcctttcagcctgacacagccaatggtgaagaaccagctgacctc
ttcagtgaagaagaaaccaacaccgctgtcaacagttccatcacaacctctaagtccaac
ggtgtccattcagacaatgagaatgatctatttgcagtccactcagaggcctcggtggag
ctgtccatggagaaccccagcaccacagccaagacctctggagctgaattcaccccgtca
cttacactatcagcaacacaacccaagtctatggagcaggtaggctacaacaggacatca
gcaacacaacccaggtctatggagcaggtaggctacaacaggacatcagcaacacaaccc
aggtctatggagcaggtagactacaacaggacatcagcaacacaatccaggtctatggag
caggtaggctacaacaggacatcagcaacacaatccaggtctatggagcaggtaggctac
aacaggacatcagcaacacaacccaggtctatggagcaggtaggctacaacaggacatca
gcaacacaacccaggtctatggagcaggtaggctacaacaggacatcagcaacacaaccc
aagtctatggagcagttggaagaggaaaaggatgaggacagctttgacatggacattgct
gtcaccaatccagagaagattggagatggcatgaacgcttacatggcctacaaggtgtcc
actcggactacattacccatgttcagaaacaggacattctcggtgtggaggaggttcagt
gatttccttgggctgtatgagaagctgtcggtgaagcactccctgaacggctgtatcatc
cctccaccaccagagaagagcgttgtggggatgaccaaagtgaaggtgggaaaggaggac
tcttcctcggctgactttgtggagaggaggagagcggctctggagaggtacctgcagaga
gtagtgtgtcacccgtccctgttacaagaccctgatgtcagagagttcctggaaagggac
gagctgcctagggcggtgggtacacacacactgagtggagctggcttcctgaagatgatc
aacagagcatctgatgctgtcagtaagatgaccatcaagatcagcgactcggacgcttgg
tttgacaacaaactgcaggaggtggagagcgaggagctgcagctgaggaaactccatgcg
gtggtggactccctggtcaaccacagaaaggagctctgcgggaacacagcagtgttggcc
aagagcatggccatgctgggcaactcggaggacaacacagctctgtcccgggccctctcc
caactggccgaggtggaggacaagatggagacgctacaccaggagcaggcggccagtgac
ttcttcatcttggccgagctgctggccgactacatccgcctacttggagccgtcaggggc
tgttttgagcagcgcatgaaaacgtggcagcgctggcaggaggctcagagcaccctgcag
aagaagagggaggttgaggcaaagcttctgtgggccaacaagcctgacaaactacaacag
gccaaagaggagatcactgagtgggagggtaaagtcactcagtacgagagggattttgac
aggatctctgtaaccgttcgcaaggaattcctcaggtttgagaaagagaagtccaaggac
ttcaaaagccagatagtgaaatatctggagtctcttctacagtctcaacagcggctcgta
aagttctgggaagcattcctgcctgaagcaaaagcgatagcatga
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