Salmo salar (Atlantic salmon): 106562423
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Entry
106562423 CDS
T04363
Name
(RefSeq) iroquois-class homeodomain protein IRX-6-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106562423
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
106562423
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
106562423
NCBI-ProteinID:
XP_013982776
UniProt:
A0A1S3KVP4
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Position
ssa11:30201925..30207021
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AA seq
529 aa
AA seq
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MLTKEAAMSFSQFGYPYNATSQFFVSANPSTTCCDSISRSVSDGTSGTQTPATFCCPSYE
NRLLASTRTELNAALGMYSSPYAAAAAASQNYASYFPYSAEPSAAIYSSLNPQYEMKDGT
GTLHSGITQPAAYYPYDHSLGQYQYDRYGTMDFNGSARRKNATRETTSTLKTWLYEHRKN
PYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWSPKNKAGDDRKDDLDKSDQ
DCVTKDSSECKDEKDLHLSDLEDMEDEDCDKLDSDCEKMAPRGPEEQRDLHRAMSGGGVG
PGGPPKRDCSSELSLSLPNSFHHSFPCGIKSLPALPSLPAMPSDFLDPLVTSKPPSTTTT
IPTGTHTVSLSHFEVSDRDKPRIWSLARTAATGVILGSAHHGAPELRTGSMLGDCQLQGT
RLPVTGTGQCGPLRGLQDPTNISNAENPFQEGPLLQSKVYSAGSYNHKALQLHCSSYPAL
SDSCQYSTIEGFSSGKAETEPSELSDTCVTLQDDKVTAFRPVMKRLMDH
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgttaacaaaagaagcagctatgtctttctctcagtttggatatccttacaatgcaact
tcacagtttttcgtgtcggcaaatcccagtacgacttgctgcgattcgatttccaggtcg
gtctctgacgggacgagcggtacccagactcctgctaccttctgctgcccttcctacgag
aaccggctcctggccagcacacggacggagctcaacgcggcactagggatgtatagctcg
ccctacgctgccgcggccgccgccagccagaactatgccagctacttcccctacagcgcc
gagccctccgctgctatctactcatctctgaatccacagtatgaaatgaaggatggcaca
ggcactctgcattctggcataactcaacctgccgcctactatccttatgaccactcactg
ggccagtaccaatatgacaggtatgggactatggactttaatgggtcagccaggaggaag
aatgccacacgtgagaccaccagtaccctgaagacatggctgtacgagcacaggaaaaac
ccctaccccaccaagggggagaagatcatgctggccatcatcaccaaaatgaccctcacc
caagtttccacctggttcgccaacgccaggaggaggctaaagaaggagaacaagatgacc
tggtcaccaaagaataaggctggggacgacaggaaggacgacctggataaaagtgaccaa
gattgtgtcaccaaagattccagtgagtgtaaagatgagaaagaccttcatctgagtgac
ctggaggacatggaggacgaggactgtgacaagctggacagtgactgtgagaagatggcc
cccaggggccctgaggaacagagggacctccacagggccatgtccggtggtggtgttggc
cctggaggccctccaaagagagactgcagctcagagctctccctctccttgcccaacagc
ttccaccactcattcccatgtggtatcaagagcctacccgccctgccctctctacccgcc
atgccctcggacttccttgatccactggtgacgtccaagcccccctccaccaccaccacc
atccccacaggcactcacactgtgtccctgtcacacttcgaggtgtcggaccgggacaaa
ccaaggatctggtctctggcgcgtacagcggccacgggggtcatcctgggctctgctcac
cacggggccccagagctccggacagggagcatgctgggagactgccagctacaggggacc
aggctaccagtgactggtaccggacagtgtgggcccctcaggggcctccaggatcctact
aacatatccaatgctgagaatcctttccaggagggccccttgttgcaatctaaggtctat
agtgcaggcagctacaaccacaaggccctccaactgcactgttcctcctatcctgcgctt
tcagactcatgccagtactccactatcgaaggattctccagtgggaaggcagagacagag
ccctcggaactcagtgacacatgtgtgaccctgcaggatgacaaggtcactgccttcaga
cctgtgatgaagaggttgatggaccactag
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