Salmo salar (Atlantic salmon): 106562437
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Entry
106562437 CDS
T04363
Name
(RefSeq) iroquois-class homeodomain protein irx-3-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106562437
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
106562437
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
106562437
NCBI-ProteinID:
XP_013982800
UniProt:
A0A1S3QDW1
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Position
ssa11:30605316..30608751
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AA seq
458 aa
AA seq
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MSFPQLGYQYIRPIYPPERQGISNARAGTELSPSGALSNVLSTMYGSPFAAAAQGYGAFL
PYSNDISIFNQLGAQYELKDSPGVQGHPGFAHHHPAFYPYGQYQFGDPSRPKNATRESTS
TLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRSRTD
EEGNVYNSDHEEGEEGDKREDEEEIDLENIDTENIENKDDLDDQDDLHADLKLDGRSDSE
ISDGYEDLQGPDQRFLKAVAKEGKDIHVDRGEHFHHHHSFEIKASQPNGEQVKLNPVSIN
SPPSENAAPAQKPKIWSLAETATTPDNPRKSPQMNGSNTVGPVAQTIISPHHRLISCPVG
KIQNWTNRAFSAHQLALLNSNHYLGLANQASANGLALYSRQQHQHTQDKSHSSDTAVTER
SSALEAEKKLLKTAFHPVHRRPQNQLEAAVVLSALASS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccgcagctgggatatcagtacatccgaccgatatacccaccggagcgccag
ggtatcagcaacgcccgagccgggacggagttgagcccgtccggggcactctcaaacgta
ctctcaactatgtatggatcacctttcgccgcagcagcacagggctatggagcatttctg
ccctattcaaacgatatatcaattttcaatcaattgggtgctcagtatgagttgaaagac
agtccaggcgtccaagggcacccaggatttgcccaccatcacccagcgttttacccatat
ggccagtatcagtttggtgacccgtccagacccaaaaatgcgaccagggagagcacgagc
acactgaaggcctggctgagcgagcaccgtaagaacccctaccccaccaagggggagaag
atcatgctggccatcatcaccaaaatgaccctcacccaagtttccacctggttcgccaac
gccaggaggaggctaaagaaggagaacaagatgacctggactccccggagccgcacagac
gaagagggaaatgtttacaacagtgatcacgaggagggagaggaaggggacaagagggag
gatgaggaagagattgatttagaaaatatcgacacggaaaatatcgagaataaggacgac
ttggatgatcaggatgacctacacgctgatttaaaattagatggtagaagcgactctgag
atttcagacggctatgaggatttacaagggcccgatcagagatttctgaaggctgtagcg
aaggagggcaaagacattcacgtggaccggggcgagcacttccaccaccatcactctttt
gaaattaaagcctcacaaccgaatggcgaacaagtgaaactgaatcctgtgtccatcaac
tcgcccccatcagaaaacgcggccccggcccagaagccaaagatttggtctttggcggag
acagcaacaactcctgacaatccccgcaaatctccacaaatgaacggcagcaacacagtt
gggcccgtggcccagaccataatcagccctcaccacagactcatctcttgtcctgttgga
aaaatccagaactggacaaaccgagcgttttctgcccaccagctcgcattactgaactct
aaccattaccttggactggcgaaccaagcttcggctaacgggctcgccctctacagcagg
cagcaacaccaacacacgcaggacaagagtcatagctcagacacagccgtcacagagaga
tctagtgccttggaagcagagaaaaagttgttaaaaacagccttccacccagttcataga
cggcctcagaatcaactcgaggcagcggtggttctatcagctctcgcctcctcctag
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