Salmo salar (Atlantic salmon): 106562438
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Entry
106562438 CDS
T04363
Symbol
irx5
Name
(RefSeq) iroquois homeobox 5
KO
K24889
iroquois-class homeodomain protein IRX
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106562438 (irx5)
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
106562438 (irx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PGA2
MRP-S32
Motif
Other DBs
NCBI-GeneID:
106562438
NCBI-ProteinID:
XP_013982802
UniProt:
A0A1S3KVX9
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Position
ssa11:30963561..30967074
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AA seq
417 aa
AA seq
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MAYPQGYLYQPSPSLALYSCPAYSTSVISGPRTEELGRSSSGSAFAPYAGTTAFTSASPG
YNSHLPYSAEAGAAATFASYVSSPYDHTTGMAGSIGYHPYAAPLGSYPYGDPAYRKNATR
DATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPR
NRSEDEEEDENIDLEKNDDDEPSKPTDKGDSTDTESDHKLLNPGDIVCDRFKEENHGKET
DPLLSDSELKDQGDRTELLPESAKPTTSSPSAMPRGGTELVVQDKPSEMGHAPGTVNSNV
TSVIHSSPSAPKPKLWSLAEIATSSDRCKSSSDGLQGHGMGHSTVITTNAASPSRSSPQC
PLPNSTVLSRPIYYTSPFTRATRTKALVRESQKGRGQTQVDLCKDSPYELKKGMSNI
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatcctcagggctacttgtaccagccatccccttctttggcgctgtattcatgc
ccggcgtacagcaccagcgttatatcgggacccaggaccgaagaacttggtagatcctca
tctggctctgcttttgctccctatgccggaactaccgcgttcaccagcgcttcgcccggg
tacaactcccatctcccgtacagtgcggaggcgggagcggccgccacattcgcttcatac
gtgagttctccctatgaccacacgacgggcatggctgggtctataggatatcacccctac
gctgctcccctgggttcatacccctacggtgacccggcataccgaaaaaacgcgacccgg
gatgccaccgccactctcaaagcctggttgaacgagcaccgtaagaacccctaccccacc
aagggggagaagatcatgctggccatcatcaccaaaatgaccctcacccaagtttccacc
tggttcgccaacgccaggaggaggctaaagaaggagaacaagatgacctggactccccgg
aaccggagcgaggacgaggaggaagacgagaacatcgatctggaaaagaatgacgacgac
gagcctagcaagccgacagacaagggagactcgacagacacagagtcagatcataaattg
ctgaacccgggggacatagtgtgcgacagatttaaagaggagaatcatggcaaagaaacg
gatccccttctgagcgactcggaattaaaagaccagggggatcggacagagttactaccc
gagtctgctaaacccaccacctcgtctccatccgccatgcctcggggaggaaccgagctc
gttgtgcaagacaagccgtcagaaatgggccatgcgccgggcacggtaaacagcaacgtg
acgtctgtcattcactcctccccatcagcccctaaacccaaactctggtccctggctgag
atcgcaacgtcctccgacaggtgtaagagcagcagcgacgggctgcagggccatgggatg
ggtcacagcacagtgatcaccaccaatgcagcgtcaccatcacggtcctccccacagtgt
cctctcccaaacagcacagtcctatccaggcctatctactacacgtccccttttacccgg
gctacacgaactaaagctttggtaagagaaagccagaaaggcagaggccaaacgcaggta
gatctttgtaaagactccccttatgaactaaagaaaggtatgtcaaacatttaa
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