Salmo salar (Atlantic salmon): 106562648
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Entry
106562648 CDS
T04363
Symbol
arnt2
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator 2
KO
K15589
aryl hydrocarbon receptor nuclear translocator 2
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106562648 (arnt2)
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
106562648 (arnt2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
HLH
PAS_9
Per3-like_PAS-A
PAS_4
PAS_2
bHLH_NCOA
bHLH_INO2
Motif
Other DBs
NCBI-GeneID:
106562648
NCBI-ProteinID:
XP_013983084
UniProt:
A0A1S3KXQ1
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Position
ssa11:complement(37983493..38077935)
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AA seq
745 aa
AA seq
DB search
MATPAAVNPSEMGSELPGPVTMPGAVVGAGQVRMGGAMPGRGGKRRSGGMDFDDEDGEGP
SKFSRYDDDDQIPGDDKERYARENHSEIERRRRNKMTQYITELSDMVPTCSALARKPDKL
TILRMAVSHMKSMRGTGNTSTDGAYKPSFLTEQQGLQTLLLSKQELKHLILEAADGFLFV
VAAETGRVIYVSDSVTPVLNHPQSEWFGSTLYEQVHPDDVDKLREQLSTSENSMTGRILD
LKTGTVKKEGQQSSMRMCMGSRRSFICRMRCGSTPLDHISLNRLSNMRKRYRNGLGPSKE
GEDQYSVVHCTGYIKAWPPAGMTIPEEDTEAGQTSKYCLVAIGRLQVTSSPVSMDMNGLT
VPTEFLSRHNSDGIITFVDPRCINVIGYQPQDLLGKDILEFCHPEDQSHLRESFQQVVKL
KGQVLSVMYRFRMKNREWMLIRTSSFTFQNPYSDEIEYIICTNTNVKQLQQQQQAELEVH
QRDGLTAYDLSQVPVPSVGGGVHEAGKNTDKTDTMFSQERDPRFADMYSGISGSGEKKMM
VPSSTAGGQQLYSQNSPFQPGHSAKSFSSSVIHVPGVNDIQPSGSSNQNLAQISRQLNPG
QVTWTGNRPPFSGQSTKAQSSPFGIGSGHSYQGDPSSYSPLSSPATSSPSGNAYSGLANR
STAFDVSGEGSQSGGQFQGRPSEVWSQWQNQHHGQQGGEPHSHPNPSQTEVFQDMLPMAG
DPTQGTANYNIEDFADLGMFPPFSE
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcccgccgcggtaaatccatcggagatgggcagtgagttgccggggcccgtt
actatgccgggggcggtggtgggggcgggccaagtgaggatgggcggagccatgccgggc
cgcgggggcaagaggagatccggagggatggactttgatgacgaggatggggaaggacca
agtaaattttcaaggtatgatgatgatgatcagatacctggtgatgataaggagagatat
gccagagagaaccacagcgagatagagcggcgtcgccgtaacaagatgacccagtacatc
acggagctgtcggacatggtgcccacctgcagcgctctggcccgcaagccagacaaactg
actatcctccgcatggccgtgtcccacatgaagtccatgagagggaccgggaacacgtcc
actgacggggcgtacaagccctcgttcctgaccgaacagcagggtctacaaaccctcctc
ctcagcaaacaggagttgaagcacctcatcctggaggcggccgacggcttcctgtttgtg
gtcgccgcggagacgggccgcgtgatctatgtgtctgactcggtgacgccggtgctcaac
cacccgcagtcggagtggtttggcagcacgctgtatgagcaggtgcatcctgacgacgtg
gacaagctgcgggaacagctcagcacctcagagaattccatgacagggcgtatcctggac
ctgaagacaggaacagtgaagaaagaggggcaacagtcttctatgaggatgtgcatgggc
tccagacgatctttcatctgcagaatgagatgtggcagcaccccactggaccacatctct
ctcaaccgactgtccaacatgaggaagagatacaggaacggtctgggaccctcgaaggag
ggagaggatcagtactctgtggtgcactgtaccggctacatcaaagcatggcccccagca
ggtatgaccataccagaagaagacacagaggcaggacagaccagtaaatactgccttgtg
gccatcggaagactgcaggtgaccagttctcccgtttccatggatatgaacggcctgacg
gttcccacggagttcctgtcgcgccacaactcagacggcatcatcactttcgtggacccg
cggtgcatcaacgtgattggataccagcctcaggatctgctggggaaagatatcctggag
ttctgtcacccagaggaccagagtcacctgagagagagctttcaacaggtggtaaagttg
aaaggccaggtgttgtctgtgatgtacaggtttcgtatgaagaacagagagtggatgtta
atccgcaccagctccttcaccttccagaacccctactccgatgagatcgagtacatcatc
tgtaccaacaccaacgtcaagcagctccaacagcagcagcaggcagagctggaggtccat
cagagagacggcctgacagcctatgacctatcacaggtgcccgttcccagtgtgggagga
ggggttcacgaggcgggcaagaacactgacaagacggacaccatgttctcacaggagaga
gacccgcgctttgctgacatgtactccggcatctcaggctctggtgagaagaagatgatg
gttccttcgtctacggcgggaggtcagcagctctactcccagaactctcccttccagccc
ggacactctgccaagagcttcagctcctcagtgatccatgtcccgggggtgaacgatatc
cagccgtcgggatcgtccaatcagaacctagctcagatctccagacagctcaacccagga
caggtgacctggactggcaacagacccccgttctctggccagtccactaaggcccagtcc
agtccatttgggataggctccggccacagttaccaaggagacccatcttcctacagcccc
ctgtcctccccggccacctcatcgcccagcggcaacgcctactctggactggccaaccgg
agcacagcgttcgatgtgtcaggagagggcagtcagagtgggggtcagttccagggtcgg
cccagtgaggtctggtcccagtggcagaaccagcaccacggccagcagggaggagagcca
cactctcaccccaacccctcccagactgaagtgttccaggacatgttgccgatggcagga
gacccaacacaaggaacagccaactacaacattgaagactttgctgatctgggcatgttc
cctcccttctccgagtag
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